RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-223ENST00000485024 NDUFAF4Q9P032 175 aa4.42□□□□□ -1.7
VPS8-223ENST00000485024 SRP68Q9UHB9 627 aaKnown RBP4.42□□□□□ -1.7
VPS8-223ENST00000485024 FBXO9Q9UK97 447 aaPredicted RBP4.42□□□□□ -1.7
VPS8-223ENST00000485024 NDRG4Q9ULP0 352 aaKnown RBP4.42□□□□□ -1.7
VPS8-223ENST00000485024 SCINQ9Y6U3 715 aa4.42□□□□□ -1.7
VPS8-223ENST00000485024 ARHGEF12Q9NZN5 1544 aa4.41□□□□□ -1.7
VPS8-223ENST00000485024 A0A0B4J269 797 aa4.41□□□□□ -1.7
VPS8-223ENST00000485024 PNMA6EA0A0J9YXQ4 647 aa4.41□□□□□ -1.7
VPS8-223ENST00000485024 ZSCAN9O15535 394 aaPredicted RBP4.41□□□□□ -1.7
VPS8-223ENST00000485024 HOXC11O43248 304 aaPredicted RBP4.41□□□□□ -1.7
VPS8-223ENST00000485024 USP1O94782 785 aa4.41□□□□□ -1.7
VPS8-223ENST00000485024 SUN1O94901 812 aa4.41□□□□□ -1.7
VPS8-223ENST00000485024 PRSS23O95084 383 aa4.41□□□□□ -1.7
VPS8-223ENST00000485024 ANXA6P08133 673 aa4.41□□□□□ -1.7
VPS8-223ENST00000485024 PECAM1P16284 738 aaPredicted RBP4.41□□□□□ -1.7
VPS8-223ENST00000485024 MPGP29372 298 aa4.41□□□□□ -1.7
VPS8-223ENST00000485024 CD6P30203 668 aa4.41□□□□□ -1.7
VPS8-223ENST00000485024 ELF1P32519 619 aa4.41□□□□□ -1.7
VPS8-223ENST00000485024 GRIA3P42263 894 aa4.41□□□□□ -1.7
VPS8-223ENST00000485024 NPTX2P47972 431 aa4.41□□□□□ -1.7
VPS8-223ENST00000485024 TOB1P50616 345 aaPredicted RBP4.41□□□□□ -1.7
VPS8-223ENST00000485024 PGDP52209 483 aa4.41□□□□□ -1.7
VPS8-223ENST00000485024 GEMIN4P57678 1058 aaKnown RBP4.41□□□□□ -1.7
VPS8-223ENST00000485024 HSD11B2P80365 405 aa4.41□□□□□ -1.7
VPS8-223ENST00000485024 TUBB3Q13509 450 aa4.41□□□□□ -1.7
VPS8-223ENST00000485024 KCNAB1Q14722 419 aa4.41□□□□□ -1.7
VPS8-223ENST00000485024 CLCA4Q14CN2 919 aa4.41□□□□□ -1.7
VPS8-223ENST00000485024 ZNF628Q5EBL2 1059 aa4.41□□□□□ -1.7
VPS8-223ENST00000485024 RETSATQ6NUM9 610 aa4.41□□□□□ -1.7
VPS8-223ENST00000485024 RINT1Q6NUQ1 792 aa4.41□□□□□ -1.7
VPS8-223ENST00000485024 MAATS1Q7Z4T9 603 aa4.41□□□□□ -1.7
VPS8-223ENST00000485024 TMEM57Q8N5G2 664 aa4.41□□□□□ -1.7
VPS8-223ENST00000485024 USP38Q8NB14 1042 aa4.41□□□□□ -1.7
VPS8-223ENST00000485024 MARK4Q96L34 752 aa4.41□□□□□ -1.7
VPS8-223ENST00000485024 TRAPPC9Q96Q05 1148 aa4.41□□□□□ -1.7
VPS8-223ENST00000485024 HIST1H2AAQ96QV6 131 aa4.41□□□□□ -1.7
VPS8-223ENST00000485024 SLC26A6Q9BXS9 759 aa4.41□□□□□ -1.7
VPS8-223ENST00000485024 TAF1DQ9H5J8 278 aaPredicted RBP4.41□□□□□ -1.7
VPS8-223ENST00000485024 CTTNBP2NLQ9P2B4 639 aa4.41□□□□□ -1.7
VPS8-223ENST00000485024 FBXO2Q9UK22 296 aaPredicted RBP4.41□□□□□ -1.7
VPS8-223ENST00000485024 TRPC5Q9UL62 973 aaPredicted RBP4.41□□□□□ -1.7
VPS8-223ENST00000485024 C19orf53Q9UNZ5 99 aaPredicted RBP4.41□□□□□ -1.7
VPS8-223ENST00000485024 USP22Q9UPT9 525 aa4.41□□□□□ -1.7
VPS8-223ENST00000485024 CRYL1Q9Y2S2 319 aa4.41□□□□□ -1.7
VPS8-223ENST00000485024 RNF17Q9BXT8 1623 aaKnown RBP4.41□□□□□ -1.7
VPS8-223ENST00000485024 TTBK1Q5TCY1 1321 aaPredicted RBP4.41□□□□□ -1.7
VPS8-223ENST00000485024 CDK13Q14004 1512 aaKnown RBP4.41□□□□□ -1.7
VPS8-223ENST00000485024 KIAA1210Q9ULL0 1709 aa4.41□□□□□ -1.7
VPS8-223ENST00000485024 DNPH1O43598 174 aa4.4□□□□□ -1.71
VPS8-223ENST00000485024 KRT86O43790 486 aa4.4□□□□□ -1.71
VPS8-223ENST00000485024 LARGE1O95461 756 aa4.4□□□□□ -1.71
VPS8-223ENST00000485024 TK1P04183 234 aa4.4□□□□□ -1.71
VPS8-223ENST00000485024 PRKCBP05771 671 aa4.4□□□□□ -1.71
VPS8-223ENST00000485024 SRGNP10124 158 aa4.4□□□□□ -1.71
VPS8-223ENST00000485024 CHRM3P20309 590 aa4.4□□□□□ -1.71
VPS8-223ENST00000485024 SFPQP23246 707 aaKnown RBP eCLIP4.4□□□□□ -1.71
VPS8-223ENST00000485024 RBL1P28749 1068 aa4.4□□□□□ -1.71
VPS8-223ENST00000485024 GATMP50440 423 aa4.4□□□□□ -1.71
VPS8-223ENST00000485024 UBE3AQ05086 875 aa4.4□□□□□ -1.71
VPS8-223ENST00000485024 KRT81Q14533 505 aa4.4□□□□□ -1.71
VPS8-223ENST00000485024 ANKRD1Q15327 319 aa4.4□□□□□ -1.71
VPS8-223ENST00000485024 RPS6KA2Q15349 733 aa4.4□□□□□ -1.71
VPS8-223ENST00000485024 SF3B3Q15393 1217 aaKnown RBP4.4□□□□□ -1.71
VPS8-223ENST00000485024 FAM110CQ1W6H9 321 aa4.4□□□□□ -1.71
VPS8-223ENST00000485024 TRIM60Q495X7 471 aa4.4□□□□□ -1.71
VPS8-223ENST00000485024 TEDDM1Q5T9Z0 273 aa4.4□□□□□ -1.71
VPS8-223ENST00000485024 ARHGAP40Q5TG30 622 aa4.4□□□□□ -1.71
VPS8-223ENST00000485024 NAA35Q5VZE5 725 aa4.4□□□□□ -1.71
VPS8-223ENST00000485024 ABLIM2Q6H8Q1 611 aa4.4□□□□□ -1.71
VPS8-223ENST00000485024 LIN54Q6MZP7 749 aa4.4□□□□□ -1.71
VPS8-223ENST00000485024 RGS7BPQ6MZT1 257 aaPredicted RBP4.4□□□□□ -1.71
VPS8-223ENST00000485024 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.4□□□□□ -1.71
VPS8-223ENST00000485024 TMPRSS9Q7Z410 1059 aa4.4□□□□□ -1.71
VPS8-223ENST00000485024 ZNF280BQ86YH2 543 aa4.4□□□□□ -1.71
VPS8-223ENST00000485024 NGDNQ8NEJ9 315 aaKnown RBP4.4□□□□□ -1.71
VPS8-223ENST00000485024 DNAJB14Q8TBM8 379 aa4.4□□□□□ -1.71
VPS8-223ENST00000485024 AFG1LQ8WV93 481 aa4.4□□□□□ -1.71
VPS8-223ENST00000485024 ATRIPQ8WXE1 791 aa4.4□□□□□ -1.71
VPS8-223ENST00000485024 EIF2AK1Q9BQI3 630 aaKnown RBP4.4□□□□□ -1.71
VPS8-223ENST00000485024 QTRT1Q9BXR0 403 aaKnown RBP4.4□□□□□ -1.71
VPS8-223ENST00000485024 BRD8Q9H0E9 1235 aa4.4□□□□□ -1.71
VPS8-223ENST00000485024 CXorf36Q9H7Y0 433 aa4.4□□□□□ -1.71
VPS8-223ENST00000485024 INTS13Q9NVM9 706 aa4.4□□□□□ -1.71
VPS8-223ENST00000485024 PI4KBQ9UBF8 816 aa4.4□□□□□ -1.71
VPS8-223ENST00000485024 UHRF1BP1LA0JNW5 1464 aa4.4□□□□□ -1.71
VPS8-223ENST00000485024 RALGAPBQ86X10 1494 aa4.4□□□□□ -1.71
VPS8-223ENST00000485024 RUSC2Q8N2Y8 1516 aa4.4□□□□□ -1.71
VPS8-223ENST00000485024 ARHGEF40Q8TER5 1519 aa4.4□□□□□ -1.71
VPS8-223ENST00000485024 CCDC151A5D8V7 595 aa4.39□□□□□ -1.71
VPS8-223ENST00000485024 J3KTA2 159 aa4.39□□□□□ -1.71
VPS8-223ENST00000485024 PSMD9O00233 223 aa4.39□□□□□ -1.71
VPS8-223ENST00000485024 PCDH17O14917 1159 aa4.39□□□□□ -1.71
VPS8-223ENST00000485024 YY2O15391 372 aa4.39□□□□□ -1.71
VPS8-223ENST00000485024 SEPT4O43236 478 aa4.39□□□□□ -1.71
VPS8-223ENST00000485024 ORC4O43929 436 aa4.39□□□□□ -1.71
VPS8-223ENST00000485024 TSPAN3O60637 253 aa4.39□□□□□ -1.71
VPS8-223ENST00000485024 MT3P25713 68 aa4.39□□□□□ -1.71
VPS8-223ENST00000485024 DGKQP52824 942 aa4.39□□□□□ -1.71
VPS8-223ENST00000485024 TIAL1Q01085 375 aaKnown RBP eCLIP4.39□□□□□ -1.71
VPS8-223ENST00000485024 G3BP1Q13283 466 aaKnown RBP eCLIP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms