RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 EPHX1P07099 455 aa18.77■□□□□ 0.6
ATG4B-221ENST00000483778 DPP6P42658 865 aa18.77■□□□□ 0.6
ATG4B-221ENST00000483778 ZNF132P52740 706 aa18.77■□□□□ 0.6
ATG4B-221ENST00000483778 KCNH2Q12809 1159 aa18.77■□□□□ 0.6
ATG4B-221ENST00000483778 PTPRNQ16849 979 aa18.77■□□□□ 0.6
ATG4B-221ENST00000483778 PLEKHG6Q3KR16 790 aa18.77■□□□□ 0.6
ATG4B-221ENST00000483778 FAM133BQ5BKY9 247 aaKnown RBP18.77■□□□□ 0.6
ATG4B-221ENST00000483778 CHST9Q7L1S5 443 aa18.77■□□□□ 0.6
ATG4B-221ENST00000483778 FAM124AQ86V42 546 aa18.77■□□□□ 0.6
ATG4B-221ENST00000483778 TRIM59Q8IWR1 403 aa18.77■□□□□ 0.6
ATG4B-221ENST00000483778 SCUBE3Q8IX30 993 aa18.77■□□□□ 0.6
ATG4B-221ENST00000483778 ELOA2Q8IYF1 753 aaPredicted RBP18.77■□□□□ 0.6
ATG4B-221ENST00000483778 DNASE2BQ8WZ79 361 aa18.77■□□□□ 0.6
ATG4B-221ENST00000483778 SCNM1Q9BWG6 230 aa18.77■□□□□ 0.6
ATG4B-221ENST00000483778 TMEM245Q9H330 911 aa18.77■□□□□ 0.6
ATG4B-221ENST00000483778 ACP6Q9NPH0 428 aa18.77■□□□□ 0.6
ATG4B-221ENST00000483778 PLXNB3Q9ULL4 1909 aa18.76■□□□□ 0.59
ATG4B-221ENST00000483778 SPEGQ15772 3267 aa18.76■□□□□ 0.59
ATG4B-221ENST00000483778 UPK3BL1B0FP48 263 aa18.76■□□□□ 0.59
ATG4B-221ENST00000483778 UPK3BL2E5RIL1 263 aa18.76■□□□□ 0.59
ATG4B-221ENST00000483778 NPC1O15118 1278 aa18.76■□□□□ 0.59
ATG4B-221ENST00000483778 TIMM44O43615 452 aa18.76■□□□□ 0.59
ATG4B-221ENST00000483778 LTFP02788 710 aa18.76■□□□□ 0.59
ATG4B-221ENST00000483778 PROS1P07225 676 aa18.76■□□□□ 0.59
ATG4B-221ENST00000483778 CD70P32970 193 aa18.76■□□□□ 0.59
ATG4B-221ENST00000483778 ATXN3P54252 364 aaPredicted RBP18.76■□□□□ 0.59
ATG4B-221ENST00000483778 BNC1Q01954 994 aa18.76■□□□□ 0.59
ATG4B-221ENST00000483778 CAMK2GQ13555 558 aaPredicted RBP18.76■□□□□ 0.59
ATG4B-221ENST00000483778 STIM1Q13586 685 aa18.76■□□□□ 0.59
ATG4B-221ENST00000483778 EIF4HQ15056 248 aaKnown RBP18.76■□□□□ 0.59
ATG4B-221ENST00000483778 PIK3R6Q5UE93 754 aa18.76■□□□□ 0.59
ATG4B-221ENST00000483778 DENND1BQ6P3S1 775 aa18.76■□□□□ 0.59
ATG4B-221ENST00000483778 SERPINA13PQ6UXR4 307 aa18.76■□□□□ 0.59
ATG4B-221ENST00000483778 LMLNQ96KR4 655 aa18.76■□□□□ 0.59
ATG4B-221ENST00000483778 SRRTQ9BXP5 876 aaKnown RBP18.76■□□□□ 0.59
ATG4B-221ENST00000483778 CYTH4Q9UIA0 394 aa18.76■□□□□ 0.59
ATG4B-221ENST00000483778 HOOK1Q9UJC3 728 aaKnown RBP18.76■□□□□ 0.59
ATG4B-221ENST00000483778 RALYQ9UKM9 306 aaKnown RBP18.76■□□□□ 0.59
ATG4B-221ENST00000483778 DOCK9Q9BZ29 2069 aa18.76■□□□□ 0.59
ATG4B-221ENST00000483778 METTL12A8MUP2 240 aa18.75■□□□□ 0.59
ATG4B-221ENST00000483778 HYAL3O43820 417 aaPredicted RBP18.75■□□□□ 0.59
ATG4B-221ENST00000483778 SH3BP5O60239 455 aa18.75■□□□□ 0.59
ATG4B-221ENST00000483778 OPHN1O60890 802 aa18.75■□□□□ 0.59
ATG4B-221ENST00000483778 TBL1XO60907 577 aa18.75■□□□□ 0.59
ATG4B-221ENST00000483778 IGLV3-19P01714 112 aa18.75■□□□□ 0.59
ATG4B-221ENST00000483778 SIM1P81133 766 aaPredicted RBP18.75■□□□□ 0.59
ATG4B-221ENST00000483778 APBA1Q02410 837 aa18.75■□□□□ 0.59
ATG4B-221ENST00000483778 BECN1Q14457 450 aa18.75■□□□□ 0.59
ATG4B-221ENST00000483778 FNDC3BQ53EP0 1204 aaKnown RBP18.75■□□□□ 0.59
ATG4B-221ENST00000483778 DCAF12L1Q5VU92 463 aa18.75■□□□□ 0.59
ATG4B-221ENST00000483778 C1orf216Q8TAB5 229 aa18.75■□□□□ 0.59
ATG4B-221ENST00000483778 ADAM32Q8TC27 787 aa18.75■□□□□ 0.59
ATG4B-221ENST00000483778 IRGQQ8WZA9 623 aa18.75■□□□□ 0.59
ATG4B-221ENST00000483778 PRCCQ92733 491 aaPredicted RBP18.75■□□□□ 0.59
ATG4B-221ENST00000483778 FCRL2Q96LA5 508 aaPredicted RBP18.75■□□□□ 0.59
ATG4B-221ENST00000483778 MED15Q96RN5 788 aa18.75■□□□□ 0.59
ATG4B-221ENST00000483778 GTPBP4Q9BZE4 634 aaKnown RBP18.75■□□□□ 0.59
ATG4B-221ENST00000483778 MIR1-1HGQ9H1L0 117 aa18.75■□□□□ 0.59
ATG4B-221ENST00000483778 IL21RQ9HBE5 538 aa18.75■□□□□ 0.59
ATG4B-221ENST00000483778 DNAAF2Q9NVR5 837 aaKnown RBP18.75■□□□□ 0.59
ATG4B-221ENST00000483778 STIM2Q9P246 746 aa18.75■□□□□ 0.59
ATG4B-221ENST00000483778 GGA2Q9UJY4 613 aa18.75■□□□□ 0.59
ATG4B-221ENST00000483778 NAALADL1Q9UQQ1 740 aa18.75■□□□□ 0.59
ATG4B-221ENST00000483778 TP53BP1Q12888 1972 aaPredicted RBP18.75■□□□□ 0.59
ATG4B-221ENST00000483778 PTPRBP23467 1997 aa18.74■□□□□ 0.59
ATG4B-221ENST00000483778 ACSL4O60488 711 aa18.74■□□□□ 0.59
ATG4B-221ENST00000483778 PABPC1P11940 636 aaKnown RBP18.74■□□□□ 0.59
ATG4B-221ENST00000483778 ACSL1P33121 698 aa18.74■□□□□ 0.59
ATG4B-221ENST00000483778 GPD2P43304 727 aa18.74■□□□□ 0.59
ATG4B-221ENST00000483778 TBX4P57082 545 aa18.74■□□□□ 0.59
ATG4B-221ENST00000483778 RPS24P62847 133 aaKnown RBP18.74■□□□□ 0.59
ATG4B-221ENST00000483778 SYCP2LQ5T4T6 812 aa18.74■□□□□ 0.59
ATG4B-221ENST00000483778 SYPL2Q5VXT5 272 aa18.74■□□□□ 0.59
ATG4B-221ENST00000483778 MBLAC2Q68D91 279 aa18.74■□□□□ 0.59
ATG4B-221ENST00000483778 GJB7Q6PEY0 223 aa18.74■□□□□ 0.59
ATG4B-221ENST00000483778 HDDC3Q8N4P3 179 aa18.74■□□□□ 0.59
ATG4B-221ENST00000483778 ZCCHC9Q8N567 271 aaKnown RBP18.74■□□□□ 0.59
ATG4B-221ENST00000483778 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.74■□□□□ 0.59
ATG4B-221ENST00000483778 FOXJ1Q92949 421 aa18.74■□□□□ 0.59
ATG4B-221ENST00000483778 PRICKLE1Q96MT3 831 aaPredicted RBP18.74■□□□□ 0.59
ATG4B-221ENST00000483778 INTS2Q9H0H0 1204 aaKnown RBP18.74■□□□□ 0.59
ATG4B-221ENST00000483778 SLC32A1Q9H598 525 aa18.74■□□□□ 0.59
ATG4B-221ENST00000483778 C6orf106Q9H6K1 298 aaPredicted RBP18.74■□□□□ 0.59
ATG4B-221ENST00000483778 PRSS16Q9NQE7 514 aa18.74■□□□□ 0.59
ATG4B-221ENST00000483778 EIF2B4Q9UI10 523 aaKnown RBP18.74■□□□□ 0.59
ATG4B-221ENST00000483778 XPO7Q9UIA9 1087 aaKnown RBP18.74■□□□□ 0.59
ATG4B-221ENST00000483778 INTS6Q9UL03 887 aaKnown RBP18.74■□□□□ 0.59
ATG4B-221ENST00000483778 CNTN6Q9UQ52 1028 aa18.74■□□□□ 0.59
ATG4B-221ENST00000483778 PLXNA2O75051 1894 aa18.73■□□□□ 0.59
ATG4B-221ENST00000483778 MEI4A8MW99 385 aa18.73■□□□□ 0.59
ATG4B-221ENST00000483778 P4HA2O15460 535 aa18.73■□□□□ 0.59
ATG4B-221ENST00000483778 LATS1O95835 1130 aa18.73■□□□□ 0.59
ATG4B-221ENST00000483778 SYPP08247 313 aa18.73■□□□□ 0.59
ATG4B-221ENST00000483778 RPL34P49207 117 aaKnown RBP18.73■□□□□ 0.59
ATG4B-221ENST00000483778 PITX1P78337 314 aaPredicted RBP18.73■□□□□ 0.59
ATG4B-221ENST00000483778 GCNT1Q02742 428 aa18.73■□□□□ 0.59
ATG4B-221ENST00000483778 ARID5AQ03989 594 aa18.73■□□□□ 0.59
ATG4B-221ENST00000483778 GRIK2Q13002 908 aa18.73■□□□□ 0.59
ATG4B-221ENST00000483778 FSCBQ5H9T9 825 aa18.73■□□□□ 0.59
ATG4B-221ENST00000483778 WDR45BQ5MNZ6 344 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms