RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 CHST9Q7L1S5 443 aa15.64■□□□□ 0.09
HDAC6-224ENST00000481929 SCD5Q86SK9 330 aa15.64■□□□□ 0.09
HDAC6-224ENST00000481929 OXR1Q8N573 874 aa15.64■□□□□ 0.09
HDAC6-224ENST00000481929 C12orf29Q8N999 325 aa15.64■□□□□ 0.09
HDAC6-224ENST00000481929 XXYLT1Q8NBI6 393 aa15.64■□□□□ 0.09
HDAC6-224ENST00000481929 KCNE4Q8WWG9 221 aa15.64■□□□□ 0.09
HDAC6-224ENST00000481929 HIC2Q96JB3 615 aa15.64■□□□□ 0.09
HDAC6-224ENST00000481929 HNRNPABQ99729 332 aaKnown RBP15.64■□□□□ 0.09
HDAC6-224ENST00000481929 PNPLA8Q9NP80 782 aa15.64■□□□□ 0.09
HDAC6-224ENST00000481929 CLIC5Q9NZA1 410 aa15.64■□□□□ 0.09
HDAC6-224ENST00000481929 HMGXB4Q9UGU5 601 aa15.64■□□□□ 0.09
HDAC6-224ENST00000481929 SCML1Q9UN30 329 aa15.64■□□□□ 0.09
HDAC6-224ENST00000481929 LRRC72A6NJI9 287 aa15.63■□□□□ 0.09
HDAC6-224ENST00000481929 EIF3DO15371 548 aaKnown RBP eCLIP15.63■□□□□ 0.09
HDAC6-224ENST00000481929 MT-CO3P00414 261 aa15.63■□□□□ 0.09
HDAC6-224ENST00000481929 ACP1P24666 158 aa15.63■□□□□ 0.09
HDAC6-224ENST00000481929 HOXD9P28356 352 aaPredicted RBP15.63■□□□□ 0.09
HDAC6-224ENST00000481929 HLA-FP30511 346 aa15.63■□□□□ 0.09
HDAC6-224ENST00000481929 HOXD13P35453 343 aa15.63■□□□□ 0.09
HDAC6-224ENST00000481929 STAT6P42226 847 aa15.63■□□□□ 0.09
HDAC6-224ENST00000481929 KIF11P52732 1056 aa15.63■□□□□ 0.09
HDAC6-224ENST00000481929 GALCP54803 685 aa15.63■□□□□ 0.09
HDAC6-224ENST00000481929 E2F1Q01094 437 aa15.63■□□□□ 0.09
HDAC6-224ENST00000481929 SRSF1Q07955 248 aaKnown RBP eCLIP15.63■□□□□ 0.09
HDAC6-224ENST00000481929 VAC14Q08AM6 782 aa15.63■□□□□ 0.09
HDAC6-224ENST00000481929 SFSWAPQ12872 951 aaKnown RBP15.63■□□□□ 0.09
HDAC6-224ENST00000481929 BNIP3Q12983 259 aa15.63■□□□□ 0.09
HDAC6-224ENST00000481929 NCOA4Q13772 614 aa15.63■□□□□ 0.09
HDAC6-224ENST00000481929 MPPE1Q53F39 396 aa15.63■□□□□ 0.09
HDAC6-224ENST00000481929 SLC45A4Q5BKX6 768 aa15.63■□□□□ 0.09
HDAC6-224ENST00000481929 SFMBT2Q5VUG0 894 aa15.63■□□□□ 0.09
HDAC6-224ENST00000481929 NCEH1Q6PIU2 408 aa15.63■□□□□ 0.09
HDAC6-224ENST00000481929 CCDC186Q7Z3E2 898 aa15.63■□□□□ 0.09
HDAC6-224ENST00000481929 PRICKLE2Q7Z3G6 844 aa15.63■□□□□ 0.09
HDAC6-224ENST00000481929 BRAPQ7Z569 592 aa15.63■□□□□ 0.09
HDAC6-224ENST00000481929 UNC93AQ86WB7 457 aa15.63■□□□□ 0.09
HDAC6-224ENST00000481929 LSMEM2Q8N112 164 aa15.63■□□□□ 0.09
HDAC6-224ENST00000481929 GZF1Q9H116 711 aaPredicted RBP15.63■□□□□ 0.09
HDAC6-224ENST00000481929 PABPC3Q9H361 631 aaKnown RBP15.63■□□□□ 0.09
HDAC6-224ENST00000481929 EBF2Q9HAK2 575 aa15.63■□□□□ 0.09
HDAC6-224ENST00000481929 FBXL12Q9NXK8 326 aa15.63■□□□□ 0.09
HDAC6-224ENST00000481929 SUN2Q9UH99 717 aa15.63■□□□□ 0.09
HDAC6-224ENST00000481929 STRIP2Q9ULQ0 834 aa15.63■□□□□ 0.09
HDAC6-224ENST00000481929 PCDHB1Q9Y5F3 818 aa15.63■□□□□ 0.09
HDAC6-224ENST00000481929 ARID1BQ8NFD5 2236 aaPredicted RBP15.63■□□□□ 0.09
HDAC6-224ENST00000481929 A0A1W2PR77 199 aa15.62■□□□□ 0.09
HDAC6-224ENST00000481929 CLIC2O15247 247 aa15.62■□□□□ 0.09
HDAC6-224ENST00000481929 KLK10O43240 276 aa15.62■□□□□ 0.09
HDAC6-224ENST00000481929 STX6O43752 255 aa15.62■□□□□ 0.09
HDAC6-224ENST00000481929 DLDP09622 509 aaKnown RBP15.62■□□□□ 0.09
HDAC6-224ENST00000481929 RXRGP48443 463 aa15.62■□□□□ 0.09
HDAC6-224ENST00000481929 NXPH1P58417 271 aa15.62■□□□□ 0.09
HDAC6-224ENST00000481929 FAM217AQ8IXS0 508 aa15.62■□□□□ 0.09
HDAC6-224ENST00000481929 AHI1Q8N157 1196 aa15.62■□□□□ 0.09
HDAC6-224ENST00000481929 HPS3Q969F9 1004 aa15.62■□□□□ 0.09
HDAC6-224ENST00000481929 ELMO3Q96BJ8 720 aa15.62■□□□□ 0.09
HDAC6-224ENST00000481929 RSPH9Q9H1X1 276 aaPredicted RBP15.62■□□□□ 0.09
HDAC6-224ENST00000481929 ABCB8Q9NUT2 735 aa15.62■□□□□ 0.09
HDAC6-224ENST00000481929 MARCH2Q9P0N8 246 aa15.62■□□□□ 0.09
HDAC6-224ENST00000481929 GGA2Q9UJY4 613 aa15.62■□□□□ 0.09
HDAC6-224ENST00000481929 SLC12A8A0AV02 714 aa15.61■□□□□ 0.09
HDAC6-224ENST00000481929 TLR4O00206 839 aa15.61■□□□□ 0.09
HDAC6-224ENST00000481929 TGFB1I1O43294 461 aa15.61■□□□□ 0.09
HDAC6-224ENST00000481929 RNASEH1O60930 286 aaKnown RBP15.61■□□□□ 0.09
HDAC6-224ENST00000481929 KIF20AO95235 890 aa15.61■□□□□ 0.09
HDAC6-224ENST00000481929 MPOP05164 745 aa15.61■□□□□ 0.09
HDAC6-224ENST00000481929 ATP5BP06576 529 aaKnown RBP15.61■□□□□ 0.09
HDAC6-224ENST00000481929 PABPC1P11940 636 aaKnown RBP15.61■□□□□ 0.09
HDAC6-224ENST00000481929 AP3M2P53677 418 aa15.61■□□□□ 0.09
HDAC6-224ENST00000481929 ERVPABLB-1P60509 514 aa15.61■□□□□ 0.09
HDAC6-224ENST00000481929 GABREP78334 506 aa15.61■□□□□ 0.09
HDAC6-224ENST00000481929 MBLAC2Q68D91 279 aa15.61■□□□□ 0.09
HDAC6-224ENST00000481929 RSRC2Q7L4I2 434 aaKnown RBP15.61■□□□□ 0.09
HDAC6-224ENST00000481929 ADIPOR2Q86V24 386 aa15.61■□□□□ 0.09
HDAC6-224ENST00000481929 OR2T34Q8NGX1 318 aa15.61■□□□□ 0.09
HDAC6-224ENST00000481929 SNRNP27Q8WVK2 155 aaKnown RBP15.61■□□□□ 0.09
HDAC6-224ENST00000481929 PLD4Q96BZ4 506 aa15.61■□□□□ 0.09
HDAC6-224ENST00000481929 SERAC1Q96JX3 654 aa15.61■□□□□ 0.09
HDAC6-224ENST00000481929 DPH1Q9BZG8 443 aa15.61■□□□□ 0.09
HDAC6-224ENST00000481929 ERVMER34-1Q9H9K5 563 aa15.61■□□□□ 0.09
HDAC6-224ENST00000481929 SERGEFQ9UGK8 458 aa15.61■□□□□ 0.09
HDAC6-224ENST00000481929 FBXO2Q9UK22 296 aaPredicted RBP15.61■□□□□ 0.09
HDAC6-224ENST00000481929 HEMK1Q9Y5R4 338 aaPredicted RBP15.61■□□□□ 0.09
HDAC6-224ENST00000481929 WNT9AO14904 365 aa15.6■□□□□ 0.09
HDAC6-224ENST00000481929 RNASEH2AO75792 299 aaKnown RBP15.6■□□□□ 0.09
HDAC6-224ENST00000481929 DXOO77932 396 aaKnown RBP15.6■□□□□ 0.09
HDAC6-224ENST00000481929 CASP4P49662 377 aa15.6■□□□□ 0.09
HDAC6-224ENST00000481929 CCR5P51681 352 aa15.6■□□□□ 0.09
HDAC6-224ENST00000481929 SNRPFP62306 86 aaKnown RBP15.6■□□□□ 0.09
HDAC6-224ENST00000481929 DAB2P98082 770 aa15.6■□□□□ 0.09
HDAC6-224ENST00000481929 KCNJ12Q14500 433 aa15.6■□□□□ 0.09
HDAC6-224ENST00000481929 PROX2Q3B8N5 592 aa15.6■□□□□ 0.09
HDAC6-224ENST00000481929 KANSL1Q7Z3B3 1105 aa15.6■□□□□ 0.09
HDAC6-224ENST00000481929 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.6■□□□□ 0.09
HDAC6-224ENST00000481929 ZNF507Q8TCN5 953 aa15.6■□□□□ 0.09
HDAC6-224ENST00000481929 CYFIP2Q96F07 1278 aa15.6■□□□□ 0.09
HDAC6-224ENST00000481929 CLIC6Q96NY7 704 aa15.6■□□□□ 0.09
HDAC6-224ENST00000481929 OMDQ99983 421 aa15.6■□□□□ 0.09
HDAC6-224ENST00000481929 PANK2Q9BZ23 570 aa15.6■□□□□ 0.09
HDAC6-224ENST00000481929 SRPRBQ9Y5M8 271 aaKnown RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms