RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 FAM90A5PA8MXJ8 464 aa5.89□□□□□ -1.47
CALD1-219ENST00000480638 KIF28PB7ZC32 967 aa5.89□□□□□ -1.47
CALD1-219ENST00000480638 ADAM10O14672 748 aa5.89□□□□□ -1.47
CALD1-219ENST00000480638 TOP3BO95985 862 aaKnown RBP5.89□□□□□ -1.47
CALD1-219ENST00000480638 CSTBP04080 98 aaKnown RBP5.89□□□□□ -1.47
CALD1-219ENST00000480638 ITGA2BP08514 1039 aa5.89□□□□□ -1.47
CALD1-219ENST00000480638 FAM90A15PP0C7V4 464 aa5.89□□□□□ -1.47
CALD1-219ENST00000480638 FAM90A14PP0C7W9 464 aa5.89□□□□□ -1.47
CALD1-219ENST00000480638 GYS1P13807 737 aa5.89□□□□□ -1.47
CALD1-219ENST00000480638 ST6GAL1P15907 406 aa5.89□□□□□ -1.47
CALD1-219ENST00000480638 RPS6KB1P23443 525 aa5.89□□□□□ -1.47
CALD1-219ENST00000480638 HOXA7P31268 230 aaPredicted RBP5.89□□□□□ -1.47
CALD1-219ENST00000480638 ZNF81P51508 661 aa5.89□□□□□ -1.47
CALD1-219ENST00000480638 SF3A3Q12874 501 aaKnown RBP eCLIP5.89□□□□□ -1.47
CALD1-219ENST00000480638 WDR93Q6P2C0 686 aa5.89□□□□□ -1.47
CALD1-219ENST00000480638 PRSS3P2Q8NHM4 247 aa5.89□□□□□ -1.47
CALD1-219ENST00000480638 CUL5Q93034 780 aa5.89□□□□□ -1.47
CALD1-219ENST00000480638 REXO5Q96IC2 774 aaKnown RBP5.89□□□□□ -1.47
CALD1-219ENST00000480638 GPR78Q96P69 363 aa5.89□□□□□ -1.47
CALD1-219ENST00000480638 SIGLEC11Q96RL6 698 aa5.89□□□□□ -1.47
CALD1-219ENST00000480638 RTKNQ9BST9 563 aa5.89□□□□□ -1.47
CALD1-219ENST00000480638 MECRQ9BV79 373 aa5.89□□□□□ -1.47
CALD1-219ENST00000480638 CCDC134Q9H6E4 229 aa5.89□□□□□ -1.47
CALD1-219ENST00000480638 DACT1Q9NYF0 836 aa5.89□□□□□ -1.47
CALD1-219ENST00000480638 LRFN1Q9P244 771 aa5.89□□□□□ -1.47
CALD1-219ENST00000480638 PI4KBQ9UBF8 816 aa5.89□□□□□ -1.47
CALD1-219ENST00000480638 CNTN6Q9UQ52 1028 aa5.89□□□□□ -1.47
CALD1-219ENST00000480638 B3GNT3Q9Y2A9 372 aa5.89□□□□□ -1.47
CALD1-219ENST00000480638 ZBTB1Q9Y2K1 713 aa5.89□□□□□ -1.47
CALD1-219ENST00000480638 KAT7O95251 611 aa5.88□□□□□ -1.47
CALD1-219ENST00000480638 HOXD9P28356 352 aaPredicted RBP5.88□□□□□ -1.47
CALD1-219ENST00000480638 MMP13P45452 471 aa5.88□□□□□ -1.47
CALD1-219ENST00000480638 SOX2P48431 317 aa5.88□□□□□ -1.47
CALD1-219ENST00000480638 FAM3BP58499 235 aaPredicted RBP5.88□□□□□ -1.47
CALD1-219ENST00000480638 TAS2R50P59544 299 aa5.88□□□□□ -1.47
CALD1-219ENST00000480638 RPL15P61313 204 aaKnown RBP5.88□□□□□ -1.47
CALD1-219ENST00000480638 MTA1Q13330 715 aa5.88□□□□□ -1.47
CALD1-219ENST00000480638 TRIM14Q14142 442 aa5.88□□□□□ -1.47
CALD1-219ENST00000480638 TRIP6Q15654 476 aaKnown RBP5.88□□□□□ -1.47
CALD1-219ENST00000480638 ETFDHQ16134 617 aa5.88□□□□□ -1.47
CALD1-219ENST00000480638 CCDC38Q502W7 563 aa5.88□□□□□ -1.47
CALD1-219ENST00000480638 GLE1Q53GS7 698 aaKnown RBP5.88□□□□□ -1.47
CALD1-219ENST00000480638 UEVLDQ8IX04 471 aa5.88□□□□□ -1.47
CALD1-219ENST00000480638 CACNA2D3Q8IZS8 1091 aa5.88□□□□□ -1.47
CALD1-219ENST00000480638 ENAHQ8N8S7 591 aaPredicted RBP5.88□□□□□ -1.47
CALD1-219ENST00000480638 TRIM2Q9C040 744 aa5.88□□□□□ -1.47
CALD1-219ENST00000480638 RNF7Q9UBF6 113 aa5.88□□□□□ -1.47
CALD1-219ENST00000480638 HERC5Q9UII4 1024 aaKnown RBP5.88□□□□□ -1.47
CALD1-219ENST00000480638 RAB21Q9UL25 225 aa5.88□□□□□ -1.47
CALD1-219ENST00000480638 SPATA31A5Q5VU36 1347 aa5.88□□□□□ -1.47
CALD1-219ENST00000480638 SPATA31A7Q8IWB4 1347 aa5.88□□□□□ -1.47
CALD1-219ENST00000480638 SLC22A23A1A5C7 686 aa5.87□□□□□ -1.47
CALD1-219ENST00000480638 C2CD4BA6NLJ0 364 aa5.87□□□□□ -1.47
CALD1-219ENST00000480638 SLC38A8A6NNN8 435 aa5.87□□□□□ -1.47
CALD1-219ENST00000480638 INO80B-WBP1J3KQ70 363 aa5.87□□□□□ -1.47
CALD1-219ENST00000480638 PPP6R2O75170 966 aa5.87□□□□□ -1.47
CALD1-219ENST00000480638 ALDOAP04075 364 aaKnown RBP5.87□□□□□ -1.47
CALD1-219ENST00000480638 ENO1P06733 434 aaKnown RBP5.87□□□□□ -1.47
CALD1-219ENST00000480638 PEPDP12955 493 aa5.87□□□□□ -1.47
CALD1-219ENST00000480638 SLC37A1P57057 533 aa5.87□□□□□ -1.47
CALD1-219ENST00000480638 RPS13P62277 151 aaKnown RBP5.87□□□□□ -1.47
CALD1-219ENST00000480638 ID2Q02363 134 aa5.87□□□□□ -1.47
CALD1-219ENST00000480638 TLE3Q04726 772 aa5.87□□□□□ -1.47
CALD1-219ENST00000480638 ZNF91Q05481 1191 aa5.87□□□□□ -1.47
CALD1-219ENST00000480638 BIRC2Q13490 618 aa5.87□□□□□ -1.47
CALD1-219ENST00000480638 KRT72Q14CN4 511 aa5.87□□□□□ -1.47
CALD1-219ENST00000480638 TUBB8Q3ZCM7 444 aa5.87□□□□□ -1.47
CALD1-219ENST00000480638 SLC9C1Q4G0N8 1177 aa5.87□□□□□ -1.47
CALD1-219ENST00000480638 C10orf62Q5T681 223 aaPredicted RBP5.87□□□□□ -1.47
CALD1-219ENST00000480638 KLHL17Q6TDP4 642 aa5.87□□□□□ -1.47
CALD1-219ENST00000480638 DEF8Q6ZN54 512 aa5.87□□□□□ -1.47
CALD1-219ENST00000480638 RHPN2Q8IUC4 686 aa5.87□□□□□ -1.47
CALD1-219ENST00000480638 STT3BQ8TCJ2 826 aa5.87□□□□□ -1.47
CALD1-219ENST00000480638 DENND1AQ8TEH3 1009 aa5.87□□□□□ -1.47
CALD1-219ENST00000480638 VPS16Q9H269 839 aa5.87□□□□□ -1.47
CALD1-219ENST00000480638 PRDM16Q9HAZ2 1276 aa5.87□□□□□ -1.47
CALD1-219ENST00000480638 PRDM8Q9NQV8 689 aa5.87□□□□□ -1.47
CALD1-219ENST00000480638 TRNAU1APQ9NX07 287 aaKnown RBP5.87□□□□□ -1.47
CALD1-219ENST00000480638 TUBA8Q9NY65 449 aaPredicted RBP5.87□□□□□ -1.47
CALD1-219ENST00000480638 TRPC5Q9UL62 973 aaPredicted RBP5.87□□□□□ -1.47
CALD1-219ENST00000480638 COMMD10Q9Y6G5 202 aa5.87□□□□□ -1.47
CALD1-219ENST00000480638 EMSYQ7Z589 1322 aa5.86□□□□□ -1.47
CALD1-219ENST00000480638 USP12O75317 370 aa5.86□□□□□ -1.47
CALD1-219ENST00000480638 PEX14O75381 377 aa5.86□□□□□ -1.47
CALD1-219ENST00000480638 ACTL6BO94805 426 aa5.86□□□□□ -1.47
CALD1-219ENST00000480638 LARGE1O95461 756 aa5.86□□□□□ -1.47
CALD1-219ENST00000480638 RFPL3SP0C7P2 107 aa5.86□□□□□ -1.47
CALD1-219ENST00000480638 CTSAP10619 480 aa5.86□□□□□ -1.47
CALD1-219ENST00000480638 GRK5P34947 590 aa5.86□□□□□ -1.47
CALD1-219ENST00000480638 PNLIPRP1P54315 467 aa5.86□□□□□ -1.47
CALD1-219ENST00000480638 SLC12A2P55011 1212 aa5.86□□□□□ -1.47
CALD1-219ENST00000480638 FOXL2P58012 376 aa5.86□□□□□ -1.47
CALD1-219ENST00000480638 STIM1Q13586 685 aa5.86□□□□□ -1.47
CALD1-219ENST00000480638 ANXA2RQ3ZCQ2 193 aa5.86□□□□□ -1.47
CALD1-219ENST00000480638 ATPAF1Q5TC12 328 aaPredicted RBP5.86□□□□□ -1.47
CALD1-219ENST00000480638 SULT6B1Q6IMI4 303 aa5.86□□□□□ -1.47
CALD1-219ENST00000480638 NFRKBQ6P4R8 1299 aa5.86□□□□□ -1.47
CALD1-219ENST00000480638 DHRS13Q6UX07 377 aa5.86□□□□□ -1.47
CALD1-219ENST00000480638 SLC39A5Q6ZMH5 540 aa5.86□□□□□ -1.47
CALD1-219ENST00000480638 RAB11FIP2Q7L804 512 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms