RNA–Protein interactions for RNA: ENST00000477939.1

TRA2B-211, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-211ENST00000477939 SPATA31D3P0C874 917 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 CDK4P11802 303 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 ATP6V1B1P15313 513 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 PRKACAP17612 351 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 MCM7P33993 719 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 PHBP35232 272 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 PTGS2P35354 604 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 VPS41P49754 854 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 RGS7P49802 495 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 ST13P50502 369 aaKnown RBP6.12□□□□□ -1.43
TRA2B-211ENST00000477939 CLCN5P51795 746 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 C21orf58P58505 322 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 PLOD1Q02809 727 aaPredicted RBP6.12□□□□□ -1.43
TRA2B-211ENST00000477939 MYO1EQ12965 1108 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 STK4Q13043 487 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 TDGQ13569 410 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 GNL2Q13823 731 aaKnown RBP6.12□□□□□ -1.43
TRA2B-211ENST00000477939 CASP8Q14790 479 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 NAA30Q147X3 362 aaPredicted RBP6.12□□□□□ -1.43
TRA2B-211ENST00000477939 NAB2Q15742 525 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 KLHL38Q2WGJ6 581 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 FUT11Q495W5 492 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 TDRD12Q587J7 1177 aaKnown RBP6.12□□□□□ -1.43
TRA2B-211ENST00000477939 RTP2Q5QGT7 225 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 AADACL4Q5VUY2 407 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 METTL2BQ6P1Q9 378 aaKnown RBP6.12□□□□□ -1.43
TRA2B-211ENST00000477939 FAM173BQ6P4H8 233 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 SLC27A1Q6PCB7 646 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 POTEGQ6S5H5 508 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 BEND4Q6ZU67 534 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 SPATA31D4Q6ZUB0 917 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 MAEAQ7L5Y9 396 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 ASCL5Q7RTU5 278 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 MILR1Q7Z6M3 343 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 AKAP14Q86UN6 197 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 CATSPER3Q86XQ3 398 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 GLYCTKQ8IVS8 523 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 SIX5Q8N196 739 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 C17orf53Q8N3J3 647 aaPredicted RBP6.12□□□□□ -1.43
TRA2B-211ENST00000477939 PPFIBP2Q8ND30 876 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 EHBP1Q8NDI1 1231 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 FBXO30Q8TB52 745 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 MGARPQ8TDB4 240 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 HASPINQ8TF76 798 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 STARD8Q92502 1023 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 SMG7Q92540 1137 aaKnown RBP6.12□□□□□ -1.43
TRA2B-211ENST00000477939 ATOH1Q92858 354 aaPredicted RBP6.12□□□□□ -1.43
TRA2B-211ENST00000477939 ACSF2Q96CM8 615 aaPredicted RBP6.12□□□□□ -1.43
TRA2B-211ENST00000477939 IQCDQ96DY2 449 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 CCDC43Q96MW1 224 aaKnown RBP6.12□□□□□ -1.43
TRA2B-211ENST00000477939 RPRD1AQ96P16 312 aaPredicted RBP6.12□□□□□ -1.43
TRA2B-211ENST00000477939 MYADMQ96S97 322 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 NOTCH4Q99466 2003 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 MRPL1Q9BYD6 325 aaKnown RBP6.12□□□□□ -1.43
TRA2B-211ENST00000477939 RHOBTB2Q9BYZ6 727 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 UNKQ9C0B0 810 aaKnown RBP6.12□□□□□ -1.43
TRA2B-211ENST00000477939 CDH19Q9H159 772 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 CXCL16Q9H2A7 254 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 MFSD1Q9H3U5 465 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 PDZD7Q9H5P4 517 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 FAM204AQ9H8W3 233 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 PDE11AQ9HCR9 933 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 TRPC7Q9HCX4 862 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 WDR6Q9NNW5 1121 aaKnown RBP6.12□□□□□ -1.43
TRA2B-211ENST00000477939 DIABLOQ9NR28 239 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 GID8Q9NWU2 228 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 KLK14Q9P0G3 267 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 GMIPQ9P107 970 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 REV1Q9UBZ9 1251 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 ADAM28Q9UKQ2 775 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 USP20Q9Y2K6 914 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 MED16Q9Y2X0 877 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 CBY1Q9Y3M2 126 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 MTF2Q9Y483 593 aaPredicted RBP6.12□□□□□ -1.43
TRA2B-211ENST00000477939 PCDHB6Q9Y5E3 794 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 PCDHB13Q9Y5F0 798 aa6.12□□□□□ -1.43
TRA2B-211ENST00000477939 OTOGLQ3ZCN5 2332 aa6.11□□□□□ -1.43
TRA2B-211ENST00000477939 SF3B1O75533 1304 aaKnown RBP eCLIP6.11□□□□□ -1.43
TRA2B-211ENST00000477939 A6NCN8 305 aa6.11□□□□□ -1.43
TRA2B-211ENST00000477939 PRR23AA6NEV1 266 aa6.11□□□□□ -1.43
TRA2B-211ENST00000477939 CASTOR2A6NHX0 329 aa6.11□□□□□ -1.43
TRA2B-211ENST00000477939 B8ZZF3 427 aa6.11□□□□□ -1.43
TRA2B-211ENST00000477939 SGK1O00141 431 aa6.11□□□□□ -1.43
TRA2B-211ENST00000477939 E2F3O00716 465 aa6.11□□□□□ -1.43
TRA2B-211ENST00000477939 CDK2AP1O14519 115 aa6.11□□□□□ -1.43
TRA2B-211ENST00000477939 SCAMP3O14828 347 aaKnown RBP6.11□□□□□ -1.43
TRA2B-211ENST00000477939 MAPK13O15264 365 aa6.11□□□□□ -1.43
TRA2B-211ENST00000477939 PI15O43692 258 aa6.11□□□□□ -1.43
TRA2B-211ENST00000477939 RNGTTO60942 597 aaKnown RBP6.11□□□□□ -1.43
TRA2B-211ENST00000477939 PALMO75781 387 aa6.11□□□□□ -1.43
TRA2B-211ENST00000477939 SASH3O75995 380 aa6.11□□□□□ -1.43
TRA2B-211ENST00000477939 RECQL4O94761 1208 aa6.11□□□□□ -1.43
TRA2B-211ENST00000477939 ANP32DO95626 131 aa6.11□□□□□ -1.43
TRA2B-211ENST00000477939 SLC4A1P02730 911 aa6.11□□□□□ -1.43
TRA2B-211ENST00000477939 GSTA1P08263 222 aa6.11□□□□□ -1.43
TRA2B-211ENST00000477939 NAGAP17050 411 aa6.11□□□□□ -1.43
TRA2B-211ENST00000477939 ATF6P18850 670 aa6.11□□□□□ -1.43
TRA2B-211ENST00000477939 AOC1P19801 751 aa6.11□□□□□ -1.43
TRA2B-211ENST00000477939 LSP1P33241 339 aa6.11□□□□□ -1.43
TRA2B-211ENST00000477939 LONP1P36776 959 aaKnown RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms