RNA–Protein interactions for RNA: ENST00000476648.5

SNX5-209, Transcript of sorting nexin 5, human

TSL 3

Gene SNX5, Length 950 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNX5-209	ENST00000476648	AQP12B	A6NM10	295 aa		4.22	□□□□□ -1.73
SNX5-209	ENST00000476648	FOXL2	P58012	376 aa		4.22	□□□□□ -1.73
SNX5-209	ENST00000476648	BTK	Q06187	659 aa		4.22	□□□□□ -1.73
SNX5-209	ENST00000476648	GALNT1	Q10472	559 aa	Predicted RBP	4.22	□□□□□ -1.73
SNX5-209	ENST00000476648	MTA1	Q13330	715 aa		4.22	□□□□□ -1.73
SNX5-209	ENST00000476648	LAMB3	Q13751	1172 aa		4.22	□□□□□ -1.73
SNX5-209	ENST00000476648	GPR162	Q16538	588 aa		4.22	□□□□□ -1.73
SNX5-209	ENST00000476648	AAK1	Q2M2I8	961 aa		4.22	□□□□□ -1.73
SNX5-209	ENST00000476648	P3H1	Q32P28	736 aa		4.22	□□□□□ -1.73
SNX5-209	ENST00000476648	PXDC1	Q5TGL8	231 aa		4.22	□□□□□ -1.73
SNX5-209	ENST00000476648	IRF2BP2	Q7Z5L9	587 aa		4.22	□□□□□ -1.73
SNX5-209	ENST00000476648	MORC1	Q86VD1	984 aa		4.22	□□□□□ -1.73
SNX5-209	ENST00000476648	RHPN2	Q8IUC4	686 aa		4.22	□□□□□ -1.73
SNX5-209	ENST00000476648	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	4.22	□□□□□ -1.73	2e-12	■□□□□ 10.9
SNX5-209	ENST00000476648	CCDC146	Q8IYE0	955 aa		4.22	□□□□□ -1.73
SNX5-209	ENST00000476648	SYTL1	Q8IYJ3	562 aa		4.22	□□□□□ -1.73
SNX5-209	ENST00000476648	C9orf106	Q8NAJ2	232 aa		4.22	□□□□□ -1.73
SNX5-209	ENST00000476648	PIGK	Q92643	395 aa		4.22	□□□□□ -1.73
SNX5-209	ENST00000476648	CUL5	Q93034	780 aa		4.22	□□□□□ -1.73
SNX5-209	ENST00000476648	MSI2	Q96DH6	328 aa	Known RBP	4.22	□□□□□ -1.73
SNX5-209	ENST00000476648	ZFYVE19	Q96K21	471 aa		4.22	□□□□□ -1.73
SNX5-209	ENST00000476648	GPR78	Q96P69	363 aa		4.22	□□□□□ -1.73
SNX5-209	ENST00000476648	PCGF6	Q9BYE7	350 aa		4.22	□□□□□ -1.73
SNX5-209	ENST00000476648	TP63	Q9H3D4	680 aa	Predicted RBP	4.22	□□□□□ -1.73
SNX5-209	ENST00000476648	MOV10	Q9HCE1	1003 aa	Known RBP	4.22	□□□□□ -1.73
SNX5-209	ENST00000476648	TRBV5-3	A0A0A0MS03	114 aa		4.21	□□□□□ -1.74
SNX5-209	ENST00000476648		A0A0G2JK05	382 aa		4.21	□□□□□ -1.74
SNX5-209	ENST00000476648	TTC34	A8MYJ7	566 aa		4.21	□□□□□ -1.74
SNX5-209	ENST00000476648	SOCS2	O14508	198 aa		4.21	□□□□□ -1.74
SNX5-209	ENST00000476648	NKX2-8	O15522	239 aa		4.21	□□□□□ -1.74
SNX5-209	ENST00000476648	ASNA1	O43681	348 aa		4.21	□□□□□ -1.74
SNX5-209	ENST00000476648	PPP6R2	O75170	966 aa		4.21	□□□□□ -1.74
SNX5-209	ENST00000476648	RPP40	O75818	363 aa	Known RBP	4.21	□□□□□ -1.74
SNX5-209	ENST00000476648	SGPL1	O95470	568 aa		4.21	□□□□□ -1.74
SNX5-209	ENST00000476648	IGKV2-30	P06310	120 aa		4.21	□□□□□ -1.74
SNX5-209	ENST00000476648	ENO1	P06733	434 aa	Known RBP	4.21	□□□□□ -1.74
SNX5-209	ENST00000476648	IGFBP2	P18065	325 aa		4.21	□□□□□ -1.74
SNX5-209	ENST00000476648	TNFRSF1B	P20333	461 aa		4.21	□□□□□ -1.74
SNX5-209	ENST00000476648	SLC8A1	P32418	973 aa		4.21	□□□□□ -1.74
SNX5-209	ENST00000476648	FAM3B	P58499	235 aa	Predicted RBP	4.21	□□□□□ -1.74
SNX5-209	ENST00000476648	MTX1	Q13505	466 aa		4.21	□□□□□ -1.74
SNX5-209	ENST00000476648	SPARCL1	Q14515	664 aa		4.21	□□□□□ -1.74
SNX5-209	ENST00000476648	TWIST1	Q15672	202 aa		4.21	□□□□□ -1.74
SNX5-209	ENST00000476648	TRIM60	Q495X7	471 aa		4.21	□□□□□ -1.74
SNX5-209	ENST00000476648	AWAT2	Q6E213	333 aa		4.21	□□□□□ -1.74
SNX5-209	ENST00000476648	KRT27	Q7Z3Y8	459 aa		4.21	□□□□□ -1.74
SNX5-209	ENST00000476648	MRPL10	Q7Z7H8	261 aa	Known RBP	4.21	□□□□□ -1.74
SNX5-209	ENST00000476648	TRABD2A	Q86V40	505 aa		4.21	□□□□□ -1.74
SNX5-209	ENST00000476648	ARL14EP	Q8N8R7	260 aa	Predicted RBP	4.21	□□□□□ -1.74
SNX5-209	ENST00000476648	STYX	Q8WUJ0	223 aa		4.21	□□□□□ -1.74
SNX5-209	ENST00000476648	MUL1	Q969V5	352 aa		4.21	□□□□□ -1.74
SNX5-209	ENST00000476648	ZBTB9	Q96C00	473 aa		4.21	□□□□□ -1.74
SNX5-209	ENST00000476648	EIF3C	Q99613	913 aa	Known RBP	4.21	□□□□□ -1.74
SNX5-209	ENST00000476648	SCNM1	Q9BWG6	230 aa		4.21	□□□□□ -1.74
SNX5-209	ENST00000476648	KRTAP1-5	Q9BYS1	174 aa		4.21	□□□□□ -1.74
SNX5-209	ENST00000476648	WDR12	Q9GZL7	423 aa	Known RBP	4.21	□□□□□ -1.74
SNX5-209	ENST00000476648	FBXO28	Q9NVF7	368 aa		4.21	□□□□□ -1.74
SNX5-209	ENST00000476648	ZBTB1	Q9Y2K1	713 aa		4.21	□□□□□ -1.74
SNX5-209	ENST00000476648		A0A087WV62	115 aa		4.2	□□□□□ -1.74
SNX5-209	ENST00000476648	ABHD14A-ACY1	A0A1B0GW23	586 aa		4.2	□□□□□ -1.74
SNX5-209	ENST00000476648	FAM90A18P	A6NE21	464 aa		4.2	□□□□□ -1.74
SNX5-209	ENST00000476648	FAM90A16P	A6NEW6	464 aa		4.2	□□□□□ -1.74
SNX5-209	ENST00000476648	GOLGA6L3	A6NEY3	463 aa		4.2	□□□□□ -1.74
SNX5-209	ENST00000476648	FAM90A9P	A6NNJ1	464 aa		4.2	□□□□□ -1.74
SNX5-209	ENST00000476648	FAM90A5P	A8MXJ8	464 aa		4.2	□□□□□ -1.74
SNX5-209	ENST00000476648	ZNF814	B7Z6K7	855 aa		4.2	□□□□□ -1.74
SNX5-209	ENST00000476648	DNPH1	O43598	174 aa		4.2	□□□□□ -1.74
SNX5-209	ENST00000476648	TLX3	O43711	291 aa	Predicted RBP	4.2	□□□□□ -1.74
SNX5-209	ENST00000476648	TNFRSF6B	O95407	300 aa		4.2	□□□□□ -1.74
SNX5-209	ENST00000476648	WNT1	P04628	370 aa		4.2	□□□□□ -1.74
SNX5-209	ENST00000476648	CD63	P08962	238 aa		4.2	□□□□□ -1.74
SNX5-209	ENST00000476648	IFIT2	P09913	472 aa	Known RBP	4.2	□□□□□ -1.74
SNX5-209	ENST00000476648	FAM90A15P	P0C7V4	464 aa		4.2	□□□□□ -1.74
SNX5-209	ENST00000476648	FAM90A14P	P0C7W9	464 aa		4.2	□□□□□ -1.74
SNX5-209	ENST00000476648	PEPD	P12955	493 aa		4.2	□□□□□ -1.74
SNX5-209	ENST00000476648	TEC	P42680	631 aa		4.2	□□□□□ -1.74
SNX5-209	ENST00000476648	CPA2	P48052	419 aa		4.2	□□□□□ -1.74
SNX5-209	ENST00000476648	SLC37A1	P57057	533 aa		4.2	□□□□□ -1.74
SNX5-209	ENST00000476648	B4GALNT1	Q00973	533 aa		4.2	□□□□□ -1.74
SNX5-209	ENST00000476648	PTK2B	Q14289	1009 aa		4.2	□□□□□ -1.74
SNX5-209	ENST00000476648	PGM5	Q15124	567 aa		4.2	□□□□□ -1.74
SNX5-209	ENST00000476648	LEXM	Q3ZCV2	418 aa		4.2	□□□□□ -1.74
SNX5-209	ENST00000476648	TTLL5	Q6EMB2	1281 aa		4.2	□□□□□ -1.74
SNX5-209	ENST00000476648	FAM57B	Q71RH2	274 aa		4.2	□□□□□ -1.74
SNX5-209	ENST00000476648	ANKRD13B	Q86YJ7	626 aa		4.2	□□□□□ -1.74
SNX5-209	ENST00000476648	ADGRF3	Q8IZF5	1079 aa		4.2	□□□□□ -1.74
SNX5-209	ENST00000476648	ZNF366	Q8N895	744 aa		4.2	□□□□□ -1.74
SNX5-209	ENST00000476648	ZNF548	Q8NEK5	533 aa	Predicted RBP	4.2	□□□□□ -1.74
SNX5-209	ENST00000476648	FAM71B	Q8TC56	605 aa		4.2	□□□□□ -1.74
SNX5-209	ENST00000476648	ZFPM2	Q8WW38	1151 aa		4.2	□□□□□ -1.74
SNX5-209	ENST00000476648	HMCES	Q96FZ2	354 aa		4.2	□□□□□ -1.74
SNX5-209	ENST00000476648	ZNF347	Q96SE7	839 aa		4.2	□□□□□ -1.74
SNX5-209	ENST00000476648	PRPF18	Q99633	342 aa	Known RBP	4.2	□□□□□ -1.74
SNX5-209	ENST00000476648	PIMREG	Q9BSJ6	248 aa		4.2	□□□□□ -1.74
SNX5-209	ENST00000476648	MECR	Q9BV79	373 aa		4.2	□□□□□ -1.74
SNX5-209	ENST00000476648	IL21R	Q9HBE5	538 aa		4.2	□□□□□ -1.74
SNX5-209	ENST00000476648	OBP2B	Q9NPH6	170 aa		4.2	□□□□□ -1.74
SNX5-209	ENST00000476648	EMSY	Q7Z589	1322 aa		4.2	□□□□□ -1.74
SNX5-209	ENST00000476648	CCDC194	A0A1B0GVG4	234 aa		4.19	□□□□□ -1.74
SNX5-209	ENST00000476648	LGALS16	A8MUM7	142 aa		4.19	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms