RNA–Protein interactions for RNA: ENST00000476648.5

SNX5-209, Transcript of sorting nexin 5, humanhuman

TSL 3

Gene SNX5, Length 950 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-209ENST00000476648 AEBP2Q6ZN18 517 aaPredicted RBP24.69■■□□□ 1.54
SNX5-209ENST00000476648 CHIC1Q5VXU3 224 aa23.16■■□□□ 1.3
SNX5-209ENST00000476648 SENP3Q9H4L4 574 aaPredicted RBP21.23■□□□□ 0.99
SNX5-209ENST00000476648 PHF23Q9BUL5 403 aaPredicted RBP20.83■□□□□ 0.93
SNX5-209ENST00000476648 FOXD1Q16676 465 aa19.82■□□□□ 0.76
SNX5-209ENST00000476648 POTEDQ86YR6 584 aa19.64■□□□□ 0.73
SNX5-209ENST00000476648 MSH5O43196 834 aa18.84■□□□□ 0.61
SNX5-209ENST00000476648 PIAS4Q8N2W9 510 aaPredicted RBP18.43■□□□□ 0.54
SNX5-209ENST00000476648 PLPPR3Q6T4P5 718 aa18.04■□□□□ 0.48
SNX5-209ENST00000476648 PPP6R1Q9UPN7 881 aa18.02■□□□□ 0.48
SNX5-209ENST00000476648 ADRA2BP18089 450 aa17.97■□□□□ 0.47
SNX5-209ENST00000476648 DMRT2Q9Y5R5 561 aa16.71■□□□□ 0.27
SNX5-209ENST00000476648 MAPK8IP2Q13387 824 aaPredicted RBP16.68■□□□□ 0.26
SNX5-209ENST00000476648 CACNB1Q02641 598 aaPredicted RBP16.63■□□□□ 0.25
SNX5-209ENST00000476648 SCAF1Q9H7N4 1312 aaKnown RBP16.5■□□□□ 0.23
SNX5-209ENST00000476648 DCAF8L1A6NGE4 600 aa16.17■□□□□ 0.18
SNX5-209ENST00000476648 RNF39Q9H2S5 420 aa15.98■□□□□ 0.15
SNX5-209ENST00000476648 HOXD11P31277 338 aaPredicted RBP15.82■□□□□ 0.12
SNX5-209ENST00000476648 C1QBPQ07021 282 aaKnown RBP15.73■□□□□ 0.11
SNX5-209ENST00000476648 PPP4R3CPQ6ZMV5 832 aa15.7■□□□□ 0.1
SNX5-209ENST00000476648 RNF216Q9NWF9 866 aaPredicted RBP15.57■□□□□ 0.08
SNX5-209ENST00000476648 CNKSR2Q8WXI2 1034 aa15.56■□□□□ 0.08
SNX5-209ENST00000476648 DNAJC5BQ9UF47 199 aa15.39■□□□□ 0.05
SNX5-209ENST00000476648 POTEHQ6S545 545 aa15.25■□□□□ 0.03
SNX5-209ENST00000476648 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.17■□□□□ 0.021e-14■□□□□ 11
SNX5-209ENST00000476648 NCBP3Q53F19 620 aaKnown RBP14.97□□□□□ -0.01
SNX5-209ENST00000476648 KCNA4P22459 653 aa14.88□□□□□ -0.03
SNX5-209ENST00000476648 CAPN15O75808 1086 aa14.77□□□□□ -0.05
SNX5-209ENST00000476648 DSG3P32926 999 aa14.76□□□□□ -0.05
SNX5-209ENST00000476648 NPM3O75607 178 aaKnown RBP14.73□□□□□ -0.05
SNX5-209ENST00000476648 U3KPZ7 1027 aaPredicted RBP14.72□□□□□ -0.05
SNX5-209ENST00000476648 SPINK5Q9NQ38 1064 aaPredicted RBP14.7□□□□□ -0.06
SNX5-209ENST00000476648 TRHP20396 242 aaPredicted RBP14.38□□□□□ -0.11
SNX5-209ENST00000476648 ABCB7O75027 752 aa14.36□□□□□ -0.11
SNX5-209ENST00000476648 APLP2Q06481 763 aa14.34□□□□□ -0.11
SNX5-209ENST00000476648 ZNF219Q9P2Y4 722 aaPredicted RBP14.33□□□□□ -0.12
SNX5-209ENST00000476648 SLC4A2P04920 1241 aa14.2□□□□□ -0.14
SNX5-209ENST00000476648 RBM42Q9BTD8 480 aaKnown RBP14.16□□□□□ -0.14
SNX5-209ENST00000476648 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.15□□□□□ -0.14
SNX5-209ENST00000476648 HNRNPUL2Q1KMD3 747 aaKnown RBP14.15□□□□□ -0.14
SNX5-209ENST00000476648 SLC4A1APQ9BWU0 796 aaKnown RBP14.08□□□□□ -0.16
SNX5-209ENST00000476648 CHRDL2Q6WN34 429 aa14.07□□□□□ -0.16
SNX5-209ENST00000476648 SAMD1Q6SPF0 538 aaPredicted RBP14.03□□□□□ -0.16
SNX5-209ENST00000476648 SP7Q8TDD2 431 aaPredicted RBP13.92□□□□□ -0.18
SNX5-209ENST00000476648 POLA2Q14181 598 aa13.81□□□□□ -0.2
SNX5-209ENST00000476648 ZBTB22O15209 634 aa13.74□□□□□ -0.21
SNX5-209ENST00000476648 AKT1S1Q96B36 256 aa13.67□□□□□ -0.22
SNX5-209ENST00000476648 FOXD4L1Q9NU39 408 aa13.66□□□□□ -0.22
SNX5-209ENST00000476648 MYCNP04198 464 aaPredicted RBP13.64□□□□□ -0.23
SNX5-209ENST00000476648 PIP4P2Q8N4L2 257 aa13.58□□□□□ -0.24
SNX5-209ENST00000476648 EHMT2Q96KQ7 1210 aa13.57□□□□□ -0.24
SNX5-209ENST00000476648 HAX1O00165 279 aa13.56□□□□□ -0.24
SNX5-209ENST00000476648 CSRNP3Q8WYN3 585 aa13.56□□□□□ -0.24
SNX5-209ENST00000476648 REM2Q8IYK8 340 aaPredicted RBP13.53□□□□□ -0.24
SNX5-209ENST00000476648 ZBTB12Q9Y330 459 aaPredicted RBP13.53□□□□□ -0.24
SNX5-209ENST00000476648 OSCARQ8IYS5 282 aa13.43□□□□□ -0.26
SNX5-209ENST00000476648 PITPNM1O00562 1244 aa13.41□□□□□ -0.26
SNX5-209ENST00000476648 FXR2P51116 673 aaKnown RBP eCLIP13.38□□□□□ -0.27
SNX5-209ENST00000476648 ATF5Q9Y2D1 282 aaPredicted RBP13.36□□□□□ -0.27
SNX5-209ENST00000476648 EVX2Q03828 476 aa13.25□□□□□ -0.29
SNX5-209ENST00000476648 ATXN8OSP0DMR3 200 aa13.2□□□□□ -0.3
SNX5-209ENST00000476648 PRKAR2AP13861 404 aaKnown RBP13.07□□□□□ -0.32
SNX5-209ENST00000476648 LHX8Q68G74 356 aa13.06□□□□□ -0.32
SNX5-209ENST00000476648 SPDYE2BA6NHP3 402 aa13.02□□□□□ -0.33
SNX5-209ENST00000476648 SPDYE6P0CI01 402 aa13.02□□□□□ -0.33
SNX5-209ENST00000476648 SPDYE2Q495Y8 402 aa13.02□□□□□ -0.33
SNX5-209ENST00000476648 CLEC11AQ9Y240 323 aa13.01□□□□□ -0.33
SNX5-209ENST00000476648 PLSCR2Q9NRY7 297 aa13□□□□□ -0.33
SNX5-209ENST00000476648 C19orf67A6NJJ6 358 aa12.98□□□□□ -0.33
SNX5-209ENST00000476648 SPDYE1Q8NFV5 336 aaPredicted RBP12.97□□□□□ -0.33
SNX5-209ENST00000476648 GABBR2O75899 941 aa12.96□□□□□ -0.33
SNX5-209ENST00000476648 FBLN2P98095 1184 aa12.94□□□□□ -0.34
SNX5-209ENST00000476648 CHADLQ6NUI6 762 aa12.79□□□□□ -0.36
SNX5-209ENST00000476648 ZNF692Q9BU19 519 aaPredicted RBP12.79□□□□□ -0.36
SNX5-209ENST00000476648 SSUH2Q9Y2M2 353 aa12.75□□□□□ -0.37
SNX5-209ENST00000476648 MKRN4PQ13434 485 aaPredicted RBP12.72□□□□□ -0.37
SNX5-209ENST00000476648 PRR29P0C7W0 189 aa12.68□□□□□ -0.38
SNX5-209ENST00000476648 POTEIP0CG38 1075 aa12.64□□□□□ -0.39
SNX5-209ENST00000476648 CD44P16070 742 aaKnown RBP12.64□□□□□ -0.39
SNX5-209ENST00000476648 PABPN1Q86U42 306 aaKnown RBP eCLIP12.57□□□□□ -0.4
SNX5-209ENST00000476648 CLCN6P51797 869 aa12.55□□□□□ -0.4
SNX5-209ENST00000476648 DCBLD2Q96PD2 775 aa12.54□□□□□ -0.4
SNX5-209ENST00000476648 FARP1Q9Y4F1 1045 aaPredicted RBP12.52□□□□□ -0.41
SNX5-209ENST00000476648 ZNF579Q8NAF0 562 aaKnown RBP12.38□□□□□ -0.43
SNX5-209ENST00000476648 ZRANB1Q9UGI0 708 aa12.36□□□□□ -0.43
SNX5-209ENST00000476648 POTEMA6NI47 508 aa12.35□□□□□ -0.43
SNX5-209ENST00000476648 OTUD5Q96G74 571 aa12.31□□□□□ -0.44
SNX5-209ENST00000476648 POTEGQ6S5H5 508 aa12.29□□□□□ -0.44
SNX5-209ENST00000476648 GALR2O43603 387 aaPredicted RBP12.27□□□□□ -0.45
SNX5-209ENST00000476648 SPDYE4A6NLX3 237 aa12.25□□□□□ -0.45
SNX5-209ENST00000476648 POTEB2H3BUK9 544 aa12.2□□□□□ -0.46
SNX5-209ENST00000476648 FKBP8Q14318 412 aa12.18□□□□□ -0.46
SNX5-209ENST00000476648 PAK3O75914 559 aaPredicted RBP12.17□□□□□ -0.46
SNX5-209ENST00000476648 CREBZFQ9NS37 354 aa12.17□□□□□ -0.46
SNX5-209ENST00000476648 PCDH10Q9P2E7 1040 aa12.16□□□□□ -0.46
SNX5-209ENST00000476648 PROM2Q8N271 834 aa12.14□□□□□ -0.47
SNX5-209ENST00000476648 PHF12Q96QT6 1004 aa12.12□□□□□ -0.47
SNX5-209ENST00000476648 STAG3Q9UJ98 1225 aa12.1□□□□□ -0.47
SNX5-209ENST00000476648 PELP1Q8IZL8 1130 aaKnown RBP12.05□□□□□ -0.48
SNX5-209ENST00000476648 METRNQ9UJH8 293 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms