RNA–Protein interactions for RNA: ENST00000475716.5

SNX5-208, Transcript of sorting nexin 5, human

TSL 3

Gene SNX5, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNX5-208	ENST00000475716	NDST1	P52848	882 aa		10.44	□□□□□ -0.74
SNX5-208	ENST00000475716	PCBP4	P57723	403 aa	Known RBP	10.44	□□□□□ -0.74
SNX5-208	ENST00000475716	ZBTB16	Q05516	673 aa		10.44	□□□□□ -0.74
SNX5-208	ENST00000475716	VAC14	Q08AM6	782 aa		10.44	□□□□□ -0.74
SNX5-208	ENST00000475716	ILK	Q13418	452 aa		10.44	□□□□□ -0.74
SNX5-208	ENST00000475716	ALCAM	Q13740	583 aa		10.44	□□□□□ -0.74
SNX5-208	ENST00000475716	BMT2	Q1RMZ1	405 aa		10.44	□□□□□ -0.74
SNX5-208	ENST00000475716	PROX2	Q3B8N5	592 aa		10.44	□□□□□ -0.74
SNX5-208	ENST00000475716	SFMBT2	Q5VUG0	894 aa		10.44	□□□□□ -0.74
SNX5-208	ENST00000475716	CHST9	Q7L1S5	443 aa		10.44	□□□□□ -0.74
SNX5-208	ENST00000475716	PRICKLE2	Q7Z3G6	844 aa		10.44	□□□□□ -0.74
SNX5-208	ENST00000475716	SPATS2	Q86XZ4	545 aa	Known RBP	10.44	□□□□□ -0.74
SNX5-208	ENST00000475716	DHX40	Q8IX18	779 aa	Known RBP	10.44	□□□□□ -0.74
SNX5-208	ENST00000475716	EXD3	Q8N9H8	876 aa		10.44	□□□□□ -0.74
SNX5-208	ENST00000475716	SYAP1	Q96A49	352 aa	Predicted RBP	10.44	□□□□□ -0.74
SNX5-208	ENST00000475716	ZNF578	Q96N58	590 aa	Predicted RBP	10.44	□□□□□ -0.74
SNX5-208	ENST00000475716	SLC2A11	Q9BYW1	496 aa		10.44	□□□□□ -0.74
SNX5-208	ENST00000475716	KIAA1586	Q9HCI6	787 aa		10.44	□□□□□ -0.74
SNX5-208	ENST00000475716	GDF3	Q9NR23	364 aa		10.44	□□□□□ -0.74
SNX5-208	ENST00000475716	FBXL12	Q9NXK8	326 aa		10.44	□□□□□ -0.74
SNX5-208	ENST00000475716	STK17A	Q9UEE5	414 aa		10.44	□□□□□ -0.74
SNX5-208	ENST00000475716	CCDC39	Q9UFE4	941 aa		10.44	□□□□□ -0.74
SNX5-208	ENST00000475716	FLNC	Q14315	2725 aa		10.44	□□□□□ -0.74
SNX5-208	ENST00000475716	CKAP5	Q14008	2032 aa		10.43	□□□□□ -0.74
SNX5-208	ENST00000475716		A0A087X0B3	334 aa		10.43	□□□□□ -0.74
SNX5-208	ENST00000475716	SIGLEC6	O43699	453 aa		10.43	□□□□□ -0.74
SNX5-208	ENST00000475716	SDC3	O75056	442 aa		10.43	□□□□□ -0.74
SNX5-208	ENST00000475716	CLSTN1	O94985	981 aa		10.43	□□□□□ -0.74
SNX5-208	ENST00000475716	VNN1	O95497	513 aa		10.43	□□□□□ -0.74
SNX5-208	ENST00000475716	FAM200B	P0CF97	657 aa		10.43	□□□□□ -0.74
SNX5-208	ENST00000475716	MYF5	P13349	255 aa		10.43	□□□□□ -0.74
SNX5-208	ENST00000475716	ACP1	P24666	158 aa		10.43	□□□□□ -0.74
SNX5-208	ENST00000475716	HOXD9	P28356	352 aa	Predicted RBP	10.43	□□□□□ -0.74
SNX5-208	ENST00000475716	GJB2	P29033	226 aa		10.43	□□□□□ -0.74
SNX5-208	ENST00000475716	RXRG	P48443	463 aa		10.43	□□□□□ -0.74
SNX5-208	ENST00000475716	KIF11	P52732	1056 aa		10.43	□□□□□ -0.74
SNX5-208	ENST00000475716	NXPH1	P58417	271 aa		10.43	□□□□□ -0.74
SNX5-208	ENST00000475716	COG7	P83436	770 aa		10.43	□□□□□ -0.74
SNX5-208	ENST00000475716	EHHADH	Q08426	723 aa		10.43	□□□□□ -0.74
SNX5-208	ENST00000475716	E2F5	Q15329	346 aa		10.43	□□□□□ -0.74
SNX5-208	ENST00000475716	ZNF699	Q32M78	642 aa		10.43	□□□□□ -0.74
SNX5-208	ENST00000475716	ZNF667	Q5HYK9	610 aa		10.43	□□□□□ -0.74
SNX5-208	ENST00000475716	CPXM2	Q8N436	756 aa		10.43	□□□□□ -0.74
SNX5-208	ENST00000475716	ZNF276	Q8N554	614 aa		10.43	□□□□□ -0.74
SNX5-208	ENST00000475716	KCNE4	Q8WWG9	221 aa		10.43	□□□□□ -0.74
SNX5-208	ENST00000475716	SKA1	Q96BD8	255 aa		10.43	□□□□□ -0.74
SNX5-208	ENST00000475716	CYFIP2	Q96F07	1278 aa		10.43	□□□□□ -0.74
SNX5-208	ENST00000475716	TWNK	Q96RR1	684 aa		10.43	□□□□□ -0.74
SNX5-208	ENST00000475716	DCLK3	Q9C098	648 aa		10.43	□□□□□ -0.74
SNX5-208	ENST00000475716	PABPC3	Q9H361	631 aa	Known RBP	10.43	□□□□□ -0.74
SNX5-208	ENST00000475716	VRTN	Q9H8Y1	702 aa		10.43	□□□□□ -0.74
SNX5-208	ENST00000475716	AGPAT3	Q9NRZ7	376 aa		10.43	□□□□□ -0.74
SNX5-208	ENST00000475716	ABCB8	Q9NUT2	735 aa		10.43	□□□□□ -0.74
SNX5-208	ENST00000475716	ADAMTS1	Q9UHI8	967 aa		10.43	□□□□□ -0.74
SNX5-208	ENST00000475716	NCKAP1	Q9Y2A7	1128 aa		10.43	□□□□□ -0.74
SNX5-208	ENST00000475716	KIF3A	Q9Y496	699 aa		10.43	□□□□□ -0.74
SNX5-208	ENST00000475716	CLIC4	Q9Y696	253 aa		10.43	□□□□□ -0.74
SNX5-208	ENST00000475716	USP9X	Q93008	2570 aa	Predicted RBP	10.43	□□□□□ -0.74
SNX5-208	ENST00000475716	ARID1B	Q8NFD5	2236 aa	Predicted RBP	10.42	□□□□□ -0.74
SNX5-208	ENST00000475716	BSN	Q9UPA5	3926 aa		10.42	□□□□□ -0.74
SNX5-208	ENST00000475716		A0A1W2PP55	124 aa		10.42	□□□□□ -0.74
SNX5-208	ENST00000475716	SLC12A8	A0AV02	714 aa		10.42	□□□□□ -0.74
SNX5-208	ENST00000475716	C10orf142	B7Z368	130 aa		10.42	□□□□□ -0.74
SNX5-208	ENST00000475716	MID1	O15344	667 aa		10.42	□□□□□ -0.74
SNX5-208	ENST00000475716	USP12	O75317	370 aa		10.42	□□□□□ -0.74
SNX5-208	ENST00000475716	KIF20A	O95235	890 aa		10.42	□□□□□ -0.74
SNX5-208	ENST00000475716	C4BPA	P04003	597 aa	Known RBP	10.42	□□□□□ -0.74
SNX5-208	ENST00000475716	RALA	P11233	206 aa		10.42	□□□□□ -0.74
SNX5-208	ENST00000475716	ARRB1	P49407	418 aa	Predicted RBP	10.42	□□□□□ -0.74
SNX5-208	ENST00000475716	SGSH	P51688	502 aa		10.42	□□□□□ -0.74
SNX5-208	ENST00000475716	UCN	P55089	124 aa		10.42	□□□□□ -0.74
SNX5-208	ENST00000475716	GABRE	P78334	506 aa		10.42	□□□□□ -0.74
SNX5-208	ENST00000475716	NFKB2	Q00653	900 aa		10.42	□□□□□ -0.74
SNX5-208	ENST00000475716	E2F1	Q01094	437 aa		10.42	□□□□□ -0.74
SNX5-208	ENST00000475716	NFATC3	Q12968	1075 aa		10.42	□□□□□ -0.74
SNX5-208	ENST00000475716	BIRC3	Q13489	604 aa		10.42	□□□□□ -0.74
SNX5-208	ENST00000475716	TTC31	Q49AM3	519 aa	Predicted RBP	10.42	□□□□□ -0.74
SNX5-208	ENST00000475716	MBLAC2	Q68D91	279 aa		10.42	□□□□□ -0.74
SNX5-208	ENST00000475716	ZNF776	Q68DI1	518 aa	Predicted RBP	10.42	□□□□□ -0.74
SNX5-208	ENST00000475716	SPOPL	Q6IQ16	392 aa		10.42	□□□□□ -0.74
SNX5-208	ENST00000475716	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	10.42	□□□□□ -0.74
SNX5-208	ENST00000475716	SLC25A45	Q8N413	288 aa		10.42	□□□□□ -0.74
SNX5-208	ENST00000475716	XXYLT1	Q8NBI6	393 aa		10.42	□□□□□ -0.74
SNX5-208	ENST00000475716	ZNF507	Q8TCN5	953 aa		10.42	□□□□□ -0.74
SNX5-208	ENST00000475716	WFDC5	Q8TCV5	224 aa		10.42	□□□□□ -0.74
SNX5-208	ENST00000475716	SNRNP27	Q8WVK2	155 aa	Known RBP	10.42	□□□□□ -0.74
SNX5-208	ENST00000475716	NDRG1	Q92597	394 aa	Known RBP	10.42	□□□□□ -0.74
SNX5-208	ENST00000475716	SERAC1	Q96JX3	654 aa		10.42	□□□□□ -0.74
SNX5-208	ENST00000475716	OSBPL2	Q9H1P3	480 aa		10.42	□□□□□ -0.74
SNX5-208	ENST00000475716	RSPH9	Q9H1X1	276 aa	Predicted RBP	10.42	□□□□□ -0.74
SNX5-208	ENST00000475716	SUN2	Q9UH99	717 aa		10.42	□□□□□ -0.74
SNX5-208	ENST00000475716	FBXO2	Q9UK22	296 aa	Predicted RBP	10.42	□□□□□ -0.74
SNX5-208	ENST00000475716	PCDHA5	Q9Y5H7	936 aa		10.42	□□□□□ -0.74
SNX5-208	ENST00000475716	USP3	Q9Y6I4	520 aa		10.42	□□□□□ -0.74
SNX5-208	ENST00000475716	PLXNA2	O75051	1894 aa		10.41	□□□□□ -0.74
SNX5-208	ENST00000475716	SIN3B	O75182	1162 aa		10.41	□□□□□ -0.74
SNX5-208	ENST00000475716	RNASEH2A	O75792	299 aa	Known RBP	10.41	□□□□□ -0.74
SNX5-208	ENST00000475716	BMP15	O95972	392 aa		10.41	□□□□□ -0.74
SNX5-208	ENST00000475716	DLD	P09622	509 aa	Known RBP	10.41	□□□□□ -0.74
SNX5-208	ENST00000475716	CD70	P32970	193 aa		10.41	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 43 ms