RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 NOX5Q96PH1 765 aa16.29■□□□□ 0.2
CPSF3-203ENST00000475482 HHIPQ96QV1 700 aa16.29■□□□□ 0.2
CPSF3-203ENST00000475482 PARD6AQ9NPB6 346 aa16.29■□□□□ 0.2
CPSF3-203ENST00000475482 ARHGEF4Q9NR80 690 aa16.29■□□□□ 0.2
CPSF3-203ENST00000475482 HESX1Q9UBX0 185 aa16.29■□□□□ 0.2
CPSF3-203ENST00000475482 LSM7Q9UK45 103 aaKnown RBP16.29■□□□□ 0.2
CPSF3-203ENST00000475482 GMEB2Q9UKD1 530 aa16.29■□□□□ 0.2
CPSF3-203ENST00000475482 RAB23Q9ULC3 237 aa16.29■□□□□ 0.2
CPSF3-203ENST00000475482 PCDHGC3Q9UN70 934 aa16.29■□□□□ 0.2
CPSF3-203ENST00000475482 PAXBP1Q9Y5B6 917 aa16.29■□□□□ 0.2
CPSF3-203ENST00000475482 AXIN1O15169 862 aa16.28■□□□□ 0.2
CPSF3-203ENST00000475482 CACNG3O60359 315 aa16.28■□□□□ 0.2
CPSF3-203ENST00000475482 GABBR2O75899 941 aa16.28■□□□□ 0.2
CPSF3-203ENST00000475482 APBB3O95704 486 aa16.28■□□□□ 0.2
CPSF3-203ENST00000475482 FTLP02792 175 aaPredicted RBP16.28■□□□□ 0.2
CPSF3-203ENST00000475482 SETSIPP0DME0 302 aa16.28■□□□□ 0.2
CPSF3-203ENST00000475482 MYBL1P10243 752 aa16.28■□□□□ 0.2
CPSF3-203ENST00000475482 CASQ1P31415 396 aa16.28■□□□□ 0.2
CPSF3-203ENST00000475482 NSFP46459 744 aaKnown RBP16.28■□□□□ 0.2
CPSF3-203ENST00000475482 NAP1L1P55209 391 aaKnown RBP16.28■□□□□ 0.2
CPSF3-203ENST00000475482 YWHAGP61981 247 aaKnown RBP eCLIP16.28■□□□□ 0.2
CPSF3-203ENST00000475482 COG7P83436 770 aa16.28■□□□□ 0.2
CPSF3-203ENST00000475482 CRY1Q16526 586 aa16.28■□□□□ 0.2
CPSF3-203ENST00000475482 LPAL2Q16609 132 aa16.28■□□□□ 0.2
CPSF3-203ENST00000475482 CLEC16AQ2KHT3 1053 aa16.28■□□□□ 0.2
CPSF3-203ENST00000475482 C2orf27AQ580R0 203 aa16.28■□□□□ 0.2
CPSF3-203ENST00000475482 ACAD10Q6JQN1 1059 aa16.28■□□□□ 0.2
CPSF3-203ENST00000475482 PRR23BQ6ZRT6 265 aa16.28■□□□□ 0.2
CPSF3-203ENST00000475482 RHOT2Q8IXI1 618 aa16.28■□□□□ 0.2
CPSF3-203ENST00000475482 FAM160A2Q8N612 972 aaPredicted RBP16.28■□□□□ 0.2
CPSF3-203ENST00000475482 IL17RCQ8NAC3 791 aa16.28■□□□□ 0.2
CPSF3-203ENST00000475482 TMEM35BQ8NCS4 154 aa16.28■□□□□ 0.2
CPSF3-203ENST00000475482 MSANTD4Q8NCY6 345 aa16.28■□□□□ 0.2
CPSF3-203ENST00000475482 KCNV2Q8TDN2 545 aa16.28■□□□□ 0.2
CPSF3-203ENST00000475482 RMDN1Q96DB5 314 aa16.28■□□□□ 0.2
CPSF3-203ENST00000475482 P2RY11Q96G91 374 aa16.28■□□□□ 0.2
CPSF3-203ENST00000475482 LOXL4Q96JB6 756 aa16.28■□□□□ 0.2
CPSF3-203ENST00000475482 ZC3H10Q96K80 434 aaKnown RBP16.28■□□□□ 0.2
CPSF3-203ENST00000475482 ULBP1Q9BZM6 244 aa16.28■□□□□ 0.2
CPSF3-203ENST00000475482 LACRTQ9GZZ8 138 aa16.28■□□□□ 0.2
CPSF3-203ENST00000475482 DLL3Q9NYJ7 618 aa16.28■□□□□ 0.2
CPSF3-203ENST00000475482 DEC1Q9P2X7 70 aa16.28■□□□□ 0.2
CPSF3-203ENST00000475482 FBXO10Q9UK96 956 aa16.28■□□□□ 0.2
CPSF3-203ENST00000475482 HCN2Q9UL51 889 aa16.28■□□□□ 0.2
CPSF3-203ENST00000475482 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.28■□□□□ 0.2
CPSF3-203ENST00000475482 STARD13Q9Y3M8 1113 aa16.28■□□□□ 0.2
CPSF3-203ENST00000475482 PLXND1Q9Y4D7 1925 aa16.27■□□□□ 0.2
CPSF3-203ENST00000475482 TMCO5BA8MYB1 307 aa16.27■□□□□ 0.2
CPSF3-203ENST00000475482 RPP40O75818 363 aaKnown RBP16.27■□□□□ 0.2
CPSF3-203ENST00000475482 CYP1A1P04798 512 aaPredicted RBP16.27■□□□□ 0.2
CPSF3-203ENST00000475482 HNRNPLP14866 589 aaKnown RBP eCLIP16.27■□□□□ 0.21e-7■■■■■ 27.6
CPSF3-203ENST00000475482 ID4P47928 161 aa16.27■□□□□ 0.2
CPSF3-203ENST00000475482 GALCP54803 685 aa16.27■□□□□ 0.2
CPSF3-203ENST00000475482 SEC13P55735 322 aa16.27■□□□□ 0.2
CPSF3-203ENST00000475482 PREPLQ4J6C6 727 aaPredicted RBP16.27■□□□□ 0.2
CPSF3-203ENST00000475482 ZNF569Q5MCW4 686 aa16.27■□□□□ 0.2
CPSF3-203ENST00000475482 EMC10Q5UCC4 262 aa16.27■□□□□ 0.2
CPSF3-203ENST00000475482 BTBD8Q5XKL5 378 aa16.27■□□□□ 0.2
CPSF3-203ENST00000475482 NAT16Q8N8M0 369 aa16.27■□□□□ 0.2
CPSF3-203ENST00000475482 TERB1Q8NA31 727 aa16.27■□□□□ 0.2
CPSF3-203ENST00000475482 UBA3Q8TBC4 463 aa16.27■□□□□ 0.2
CPSF3-203ENST00000475482 NDRG1Q92597 394 aaKnown RBP16.27■□□□□ 0.2
CPSF3-203ENST00000475482 ZNF592Q92610 1267 aa16.27■□□□□ 0.2
CPSF3-203ENST00000475482 VCPIP1Q96JH7 1222 aa16.27■□□□□ 0.2
CPSF3-203ENST00000475482 ACP6Q9NPH0 428 aa16.27■□□□□ 0.2
CPSF3-203ENST00000475482 CNGB3Q9NQW8 809 aa16.27■□□□□ 0.2
CPSF3-203ENST00000475482 WDR35Q9P2L0 1181 aa16.27■□□□□ 0.2
CPSF3-203ENST00000475482 DNAI1Q9UI46 699 aa16.27■□□□□ 0.2
CPSF3-203ENST00000475482 ZNF510Q9Y2H8 683 aa16.27■□□□□ 0.2
CPSF3-203ENST00000475482 MACROD2A1Z1Q3 448 aa16.26■□□□□ 0.19
CPSF3-203ENST00000475482 RCCD1A6NED2 376 aa16.26■□□□□ 0.19
CPSF3-203ENST00000475482 TRIM24O15164 1050 aa16.26■□□□□ 0.19
CPSF3-203ENST00000475482 ADAM23O75077 832 aa16.26■□□□□ 0.19
CPSF3-203ENST00000475482 CISD3P0C7P0 127 aa16.26■□□□□ 0.19
CPSF3-203ENST00000475482 UNGP13051 313 aaPredicted RBP16.26■□□□□ 0.19
CPSF3-203ENST00000475482 TYRP14679 529 aa16.26■□□□□ 0.19
CPSF3-203ENST00000475482 RPL34P49207 117 aaKnown RBP16.26■□□□□ 0.19
CPSF3-203ENST00000475482 DGKEP52429 567 aa16.26■□□□□ 0.19
CPSF3-203ENST00000475482 SNX16P57768 344 aa16.26■□□□□ 0.19
CPSF3-203ENST00000475482 CENPCQ03188 943 aa16.26■□□□□ 0.19
CPSF3-203ENST00000475482 ADIGQ0VDE8 80 aa16.26■□□□□ 0.19
CPSF3-203ENST00000475482 EFEMP1Q12805 493 aa16.26■□□□□ 0.19
CPSF3-203ENST00000475482 ANO4Q32M45 955 aa16.26■□□□□ 0.19
CPSF3-203ENST00000475482 PMF1Q6P1K2 205 aa16.26■□□□□ 0.19
CPSF3-203ENST00000475482 TMEM92Q6UXU6 159 aa16.26■□□□□ 0.19
CPSF3-203ENST00000475482 SYT10Q6XYQ8 523 aa16.26■□□□□ 0.19
CPSF3-203ENST00000475482 MIB1Q86YT6 1006 aa16.26■□□□□ 0.19
CPSF3-203ENST00000475482 FAM217AQ8IXS0 508 aa16.26■□□□□ 0.19
CPSF3-203ENST00000475482 CCDC33Q8N5R6 958 aa16.26■□□□□ 0.19
CPSF3-203ENST00000475482 ALLCQ8N6M5 410 aa16.26■□□□□ 0.19
CPSF3-203ENST00000475482 OLIG1Q8TAK6 271 aa16.26■□□□□ 0.19
CPSF3-203ENST00000475482 UBE2Q2Q8WVN8 375 aa16.26■□□□□ 0.19
CPSF3-203ENST00000475482 RFFLQ8WZ73 363 aa16.26■□□□□ 0.19
CPSF3-203ENST00000475482 HSFY1Q96LI6 401 aa16.26■□□□□ 0.19
CPSF3-203ENST00000475482 PCDHB18PQ96TA0 734 aa16.26■□□□□ 0.19
CPSF3-203ENST00000475482 DCLK3Q9C098 648 aa16.26■□□□□ 0.19
CPSF3-203ENST00000475482 MIS12Q9H081 205 aa16.26■□□□□ 0.19
CPSF3-203ENST00000475482 LHX5Q9H2C1 402 aa16.26■□□□□ 0.19
CPSF3-203ENST00000475482 LRRC4Q9HBW1 653 aa16.26■□□□□ 0.19
CPSF3-203ENST00000475482 MARCH2Q9P0N8 246 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms