RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 TNFAIP3P21580 790 aa13.63□□□□□ -0.23
TPM3-216ENST00000473036 NOS2P35228 1153 aa13.63□□□□□ -0.23
TPM3-216ENST00000473036 SCNN1AP37088 669 aa13.63□□□□□ -0.23
TPM3-216ENST00000473036 MATKP42679 507 aa13.63□□□□□ -0.23
TPM3-216ENST00000473036 ZNF75DP51815 510 aa13.63□□□□□ -0.23
TPM3-216ENST00000473036 GSCP56915 257 aaPredicted RBP13.63□□□□□ -0.23
TPM3-216ENST00000473036 GAD2Q05329 585 aa13.63□□□□□ -0.23
TPM3-216ENST00000473036 KLHL30Q0D2K2 578 aa13.63□□□□□ -0.23
TPM3-216ENST00000473036 MTAPQ13126 283 aa13.63□□□□□ -0.23
TPM3-216ENST00000473036 NNTQ13423 1086 aa13.63□□□□□ -0.23
TPM3-216ENST00000473036 ARID5BQ14865 1188 aa13.63□□□□□ -0.23
TPM3-216ENST00000473036 ANO4Q32M45 955 aa13.63□□□□□ -0.23
TPM3-216ENST00000473036 PPP1R15BQ5SWA1 713 aa13.63□□□□□ -0.23
TPM3-216ENST00000473036 SH3PXD2AQ5TCZ1 1133 aa13.63□□□□□ -0.23
TPM3-216ENST00000473036 RFWD3Q6PCD5 774 aa13.63□□□□□ -0.23
TPM3-216ENST00000473036 MCOLN2Q8IZK6 566 aa13.63□□□□□ -0.23
TPM3-216ENST00000473036 SYN2Q92777 582 aaPredicted RBP13.63□□□□□ -0.23
TPM3-216ENST00000473036 GOLGA1Q92805 767 aa13.63□□□□□ -0.23
TPM3-216ENST00000473036 CD101Q93033 1021 aa13.63□□□□□ -0.23
TPM3-216ENST00000473036 TBCBQ99426 244 aa13.63□□□□□ -0.23
TPM3-216ENST00000473036 DCLK3Q9C098 648 aa13.63□□□□□ -0.23
TPM3-216ENST00000473036 NUCKS1Q9H1E3 243 aaKnown RBP13.63□□□□□ -0.23
TPM3-216ENST00000473036 TMPRSS4Q9NRS4 437 aa13.63□□□□□ -0.23
TPM3-216ENST00000473036 PIGVQ9NUD9 493 aa13.63□□□□□ -0.23
TPM3-216ENST00000473036 ADAM22Q9P0K1 906 aa13.63□□□□□ -0.23
TPM3-216ENST00000473036 IMPACTQ9P2X3 320 aa13.63□□□□□ -0.23
TPM3-216ENST00000473036 FBXO10Q9UK96 956 aa13.63□□□□□ -0.23
TPM3-216ENST00000473036 GMEB2Q9UKD1 530 aa13.63□□□□□ -0.23
TPM3-216ENST00000473036 NENFQ9UMX5 172 aa13.63□□□□□ -0.23
TPM3-216ENST00000473036 SYNJ2BP-COX16A0A087WUM0 186 aa13.62□□□□□ -0.23
TPM3-216ENST00000473036 C2CD4BA6NLJ0 364 aa13.62□□□□□ -0.23
TPM3-216ENST00000473036 NEDD8-MDP1E9PL57 170 aa13.62□□□□□ -0.23
TPM3-216ENST00000473036 ATMINO43313 823 aaPredicted RBP13.62□□□□□ -0.23
TPM3-216ENST00000473036 ACSL4O60488 711 aa13.62□□□□□ -0.23
TPM3-216ENST00000473036 TSPAN3O60637 253 aa13.62□□□□□ -0.23
TPM3-216ENST00000473036 TULP3O75386 442 aa13.62□□□□□ -0.23
TPM3-216ENST00000473036 ADCY5O95622 1261 aa13.62□□□□□ -0.23
TPM3-216ENST00000473036 ADH1CP00326 375 aa13.62□□□□□ -0.23
TPM3-216ENST00000473036 RRM1P23921 792 aa13.62□□□□□ -0.23
TPM3-216ENST00000473036 HNRNPH3P31942 346 aaKnown RBP13.62□□□□□ -0.23
TPM3-216ENST00000473036 RFC1P35251 1148 aaPredicted RBP13.62□□□□□ -0.23
TPM3-216ENST00000473036 NSFP46459 744 aaKnown RBP13.62□□□□□ -0.23
TPM3-216ENST00000473036 KDSRQ06136 332 aa13.62□□□□□ -0.23
TPM3-216ENST00000473036 RNF43Q68DV7 783 aa13.62□□□□□ -0.23
TPM3-216ENST00000473036 DRC7Q8IY82 874 aa13.62□□□□□ -0.23
TPM3-216ENST00000473036 CPXM2Q8N436 756 aa13.62□□□□□ -0.23
TPM3-216ENST00000473036 AZIN2Q96A70 460 aa13.62□□□□□ -0.23
TPM3-216ENST00000473036 CFAP57Q96MR6 1250 aa13.62□□□□□ -0.23
TPM3-216ENST00000473036 PRICKLE1Q96MT3 831 aaPredicted RBP13.62□□□□□ -0.23
TPM3-216ENST00000473036 SERPINB11Q96P15 392 aa13.62□□□□□ -0.23
TPM3-216ENST00000473036 DNAJC7Q99615 494 aa13.62□□□□□ -0.23
TPM3-216ENST00000473036 PRMT1Q99873 361 aaKnown RBP13.62□□□□□ -0.23
TPM3-216ENST00000473036 BBS2Q9BXC9 721 aa13.62□□□□□ -0.23
TPM3-216ENST00000473036 CHRDQ9H2X0 955 aa13.62□□□□□ -0.23
TPM3-216ENST00000473036 FAM204AQ9H8W3 233 aa13.62□□□□□ -0.23
TPM3-216ENST00000473036 ZDHHC4Q9NPG8 344 aa13.62□□□□□ -0.23
TPM3-216ENST00000473036 DDIT4Q9NX09 232 aa13.62□□□□□ -0.23
TPM3-216ENST00000473036 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.62□□□□□ -0.23
TPM3-216ENST00000473036 COX16Q9P0S2 106 aa13.62□□□□□ -0.23
TPM3-216ENST00000473036 RAB23Q9ULC3 237 aa13.62□□□□□ -0.23
TPM3-216ENST00000473036 ZNF510Q9Y2H8 683 aa13.62□□□□□ -0.23
TPM3-216ENST00000473036 LUC7L2Q9Y383 392 aaKnown RBP13.62□□□□□ -0.23
TPM3-216ENST00000473036 A0A0A0MRY4 1105 aa13.61□□□□□ -0.23
TPM3-216ENST00000473036 M0QYT0 321 aa13.61□□□□□ -0.23
TPM3-216ENST00000473036 CACNG3O60359 315 aa13.61□□□□□ -0.23
TPM3-216ENST00000473036 MOCS2O96007 188 aaPredicted RBP13.61□□□□□ -0.23
TPM3-216ENST00000473036 CCDC172P0C7W6 258 aa13.61□□□□□ -0.23
TPM3-216ENST00000473036 HOXD9P28356 352 aaPredicted RBP13.61□□□□□ -0.23
TPM3-216ENST00000473036 HARS2P49590 506 aaKnown RBP13.61□□□□□ -0.23
TPM3-216ENST00000473036 ADKP55263 362 aaKnown RBP13.61□□□□□ -0.23
TPM3-216ENST00000473036 RPL7AP62424 266 aaKnown RBP13.61□□□□□ -0.23
TPM3-216ENST00000473036 CDK17Q00537 523 aa13.61□□□□□ -0.23
TPM3-216ENST00000473036 OGDHQ02218 1023 aa13.61□□□□□ -0.23
TPM3-216ENST00000473036 C1QBPQ07021 282 aaKnown RBP13.61□□□□□ -0.23
TPM3-216ENST00000473036 NR1H3Q13133 447 aa13.61□□□□□ -0.23
TPM3-216ENST00000473036 NME3Q13232 169 aa13.61□□□□□ -0.23
TPM3-216ENST00000473036 TSR1Q2NL82 804 aaKnown RBP13.61□□□□□ -0.23
TPM3-216ENST00000473036 C15orf59Q2T9L4 293 aaPredicted RBP13.61□□□□□ -0.23
TPM3-216ENST00000473036 ASTE1Q2TB18 679 aaPredicted RBP13.61□□□□□ -0.23
TPM3-216ENST00000473036 SLC25A52Q3SY17 297 aa13.61□□□□□ -0.23
TPM3-216ENST00000473036 CCDC14Q49A88 953 aa13.61□□□□□ -0.23
TPM3-216ENST00000473036 ADGRF1Q5T601 910 aa13.61□□□□□ -0.23
TPM3-216ENST00000473036 EMC10Q5UCC4 262 aa13.61□□□□□ -0.23
TPM3-216ENST00000473036 PIK3R6Q5UE93 754 aa13.61□□□□□ -0.23
TPM3-216ENST00000473036 C1orf228Q6PIY5 440 aa13.61□□□□□ -0.23
TPM3-216ENST00000473036 ARCQ7LC44 396 aa13.61□□□□□ -0.23
TPM3-216ENST00000473036 C3orf20Q8ND61 904 aa13.61□□□□□ -0.23
TPM3-216ENST00000473036 WFDC5Q8TCV5 224 aa13.61□□□□□ -0.23
TPM3-216ENST00000473036 NETO1Q8TDF5 533 aa13.61□□□□□ -0.23
TPM3-216ENST00000473036 RXFP2Q8WXD0 754 aa13.61□□□□□ -0.23
TPM3-216ENST00000473036 PGAP3Q96FM1 320 aaPredicted RBP13.61□□□□□ -0.23
TPM3-216ENST00000473036 MAGEB5Q9BZ81 275 aa13.61□□□□□ -0.23
TPM3-216ENST00000473036 TRIM7Q9C029 511 aa13.61□□□□□ -0.23
TPM3-216ENST00000473036 ADAMTS1Q9UHI8 967 aa13.61□□□□□ -0.23
TPM3-216ENST00000473036 SNX10Q9Y5X0 201 aa13.61□□□□□ -0.23
TPM3-216ENST00000473036 CHD8Q9HCK8 2581 aa13.61□□□□□ -0.23
TPM3-216ENST00000473036 SPTBN2O15020 2390 aa13.6□□□□□ -0.23
TPM3-216ENST00000473036 A0A087X0T9 212 aa13.6□□□□□ -0.23
TPM3-216ENST00000473036 PRRT4C9JH25 899 aa13.6□□□□□ -0.23
TPM3-216ENST00000473036 MFAP3LO75121 409 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms