RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 SUMF1Q8NBK3 374 aa3.81□□□□□ -1.8
XRN1-209ENST00000472625 ZNF461Q8TAF7 563 aa3.81□□□□□ -1.8
XRN1-209ENST00000472625 LNX1Q8TBB1 728 aaPredicted RBP3.81□□□□□ -1.8
XRN1-209ENST00000472625 CSGALNACT1Q8TDX6 532 aa3.81□□□□□ -1.8
XRN1-209ENST00000472625 THAP3Q8WTV1 239 aaPredicted RBP3.81□□□□□ -1.8
XRN1-209ENST00000472625 RSAD2Q8WXG1 361 aa3.81□□□□□ -1.8
XRN1-209ENST00000472625 HAS1Q92839 578 aa3.81□□□□□ -1.8
XRN1-209ENST00000472625 FGF14Q92915 247 aa3.81□□□□□ -1.8
XRN1-209ENST00000472625 CLDN23Q96B33 292 aa3.81□□□□□ -1.8
XRN1-209ENST00000472625 MBD6Q96DN6 1003 aa3.81□□□□□ -1.8
XRN1-209ENST00000472625 DYDC2Q96IM9 177 aa3.81□□□□□ -1.8
XRN1-209ENST00000472625 CPB2Q96IY4 423 aa3.81□□□□□ -1.8
XRN1-209ENST00000472625 GCNAQ96QF7 691 aa3.81□□□□□ -1.8
XRN1-209ENST00000472625 TSPAN18Q96SJ8 248 aa3.81□□□□□ -1.8
XRN1-209ENST00000472625 HSD17B14Q9BPX1 270 aa3.81□□□□□ -1.8
XRN1-209ENST00000472625 SH2D3AQ9BRG2 576 aa3.81□□□□□ -1.8
XRN1-209ENST00000472625 POLR3CQ9BUI4 534 aaPredicted RBP3.81□□□□□ -1.8
XRN1-209ENST00000472625 TRMT61BQ9BVS5 477 aaKnown RBP3.81□□□□□ -1.8
XRN1-209ENST00000472625 MRPL4Q9BYD3 311 aaKnown RBP3.81□□□□□ -1.8
XRN1-209ENST00000472625 FZD8Q9H461 694 aa3.81□□□□□ -1.8
XRN1-209ENST00000472625 C8orf33Q9H7E9 229 aaPredicted RBP3.81□□□□□ -1.8
XRN1-209ENST00000472625 BRD9Q9H8M2 597 aa3.81□□□□□ -1.8
XRN1-209ENST00000472625 NCOA5Q9HCD5 579 aaKnown RBP3.81□□□□□ -1.8
XRN1-209ENST00000472625 ZFP14Q9HCL3 533 aa3.81□□□□□ -1.8
XRN1-209ENST00000472625 XPNPEP1Q9NQW7 623 aa3.81□□□□□ -1.8
XRN1-209ENST00000472625 KCND2Q9NZV8 630 aa3.81□□□□□ -1.8
XRN1-209ENST00000472625 TPCN1Q9ULQ1 816 aa3.81□□□□□ -1.8
XRN1-209ENST00000472625 USP18Q9UMW8 372 aa3.81□□□□□ -1.8
XRN1-209ENST00000472625 NOL7Q9UMY1 257 aaKnown RBP3.81□□□□□ -1.8
XRN1-209ENST00000472625 HES2Q9Y543 173 aa3.81□□□□□ -1.8
XRN1-209ENST00000472625 PCDHB4Q9Y5E5 795 aa3.81□□□□□ -1.8
XRN1-209ENST00000472625 CDY1Q9Y6F8 540 aa3.81□□□□□ -1.8
XRN1-209ENST00000472625 R4GN57 208 aa3.81□□□□□ -1.8
XRN1-209ENST00000472625 WDR87Q6ZQQ6 2873 aa3.81□□□□□ -1.8
XRN1-209ENST00000472625 SPTBN4Q9H254 2564 aa3.81□□□□□ -1.8
XRN1-209ENST00000472625 MYH9P35579 1960 aaKnown RBP3.8□□□□□ -1.8
XRN1-209ENST00000472625 PLXNA3P51805 1871 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 ASPMQ8IZT6 3477 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 CCDC163A0A0D9SF12 145 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 FAM90A27PA6NNH2 459 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 ZNF561-AS1K7EIQ3 104 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 ZNF263O14978 683 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 CCL16O15467 120 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 NOBOXO60393 691 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 B4GALT3O60512 393 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 ATG13O75143 517 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 AKAP3O75969 853 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 RASGRP1O95267 797 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 CRTAMO95727 393 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 RHOP08100 348 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 ADRB1P08588 477 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 OR52Z1P0C646 297 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 SPATA31D3P0C874 917 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 MCF2P10911 925 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 CPA1P15085 419 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 CYP11B2P19099 503 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 RPA1P27694 616 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 MARCKSP29966 332 aaPredicted RBP3.8□□□□□ -1.8
XRN1-209ENST00000472625 OR1D2P34982 312 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 GPC5P78333 572 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 HMGN5P82970 282 aaKnown RBP3.8□□□□□ -1.8
XRN1-209ENST00000472625 ROR1Q01973 937 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 EFEMP1Q12805 493 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 SMARCB1Q12824 385 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 STRN3Q13033 797 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 STK3Q13188 491 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 VEPH1Q14D04 833 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 KARSQ15046 597 aaKnown RBP3.8□□□□□ -1.8
XRN1-209ENST00000472625 NPY5RQ15761 445 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 UPP1Q16831 310 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 ZNF568Q3ZCX4 644 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 ARHGAP15Q53QZ3 475 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 ATF7IP2Q5U623 682 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 ERICH6BQ5W0A0 696 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 IL31Q6EBC2 164 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 PARM1Q6UWI2 310 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 CD300LDQ6UXZ3 194 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 SPATA31D4Q6ZUB0 917 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 USP37Q86T82 979 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 ITIH5Q86UX2 942 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 LONP2Q86WA8 852 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 NOSTRINQ8IVI9 506 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 DIS3L2Q8IYB7 885 aaKnown RBP3.8□□□□□ -1.8
XRN1-209ENST00000472625 SPEM1Q8N4L4 309 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 PHOSPHO1Q8TCT1 267 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 C2orf15Q8WU43 125 aaKnown RBP3.8□□□□□ -1.8
XRN1-209ENST00000472625 ZCCHC14Q8WYQ9 949 aaKnown RBP3.8□□□□□ -1.8
XRN1-209ENST00000472625 FAM3CQ92520 227 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 NELL1Q92832 810 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 SMARCD2Q92925 531 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 GTF3C6Q969F1 213 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 GJA10Q969M2 543 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 LOXL4Q96JB6 756 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 CHAMP1Q96JM3 812 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 ZNF512Q96ME7 567 aaPredicted RBP3.8□□□□□ -1.8
XRN1-209ENST00000472625 ZSWIM3Q96MP5 696 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 KXD1Q9BQD3 176 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 CLSTN3Q9BQT9 956 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 PDZD7Q9H5P4 517 aa3.8□□□□□ -1.8
XRN1-209ENST00000472625 SLITRK6Q9H5Y7 841 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms