RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 TLDC1Q6P9B6 456 aa4.4□□□□□ -1.71
RBM39-228ENST00000471635 KIAA0408Q6ZU52 694 aa4.4□□□□□ -1.71
RBM39-228ENST00000471635 ARL14EPQ8N8R7 260 aaPredicted RBP4.4□□□□□ -1.71
RBM39-228ENST00000471635 ASB12Q8WXK4 309 aa4.4□□□□□ -1.71
RBM39-228ENST00000471635 TTC17Q96AE7 1141 aa4.4□□□□□ -1.71
RBM39-228ENST00000471635 MSI2Q96DH6 328 aaKnown RBP4.4□□□□□ -1.71
RBM39-228ENST00000471635 PCDHAC1Q9H158 963 aa4.4□□□□□ -1.71
RBM39-228ENST00000471635 CDCP1Q9H5V8 836 aa4.4□□□□□ -1.71
RBM39-228ENST00000471635 PRPF4O43172 522 aaKnown RBP eCLIP4.39□□□□□ -1.71
RBM39-228ENST00000471635 NDST3O95803 873 aa4.39□□□□□ -1.71
RBM39-228ENST00000471635 ENO1P06733 434 aaKnown RBP4.39□□□□□ -1.71
RBM39-228ENST00000471635 PECAM1P16284 738 aaPredicted RBP4.39□□□□□ -1.71
RBM39-228ENST00000471635 TSHRP16473 764 aa4.39□□□□□ -1.71
RBM39-228ENST00000471635 DMWDQ09019 674 aa4.39□□□□□ -1.71
RBM39-228ENST00000471635 ATP1A4Q13733 1029 aa4.39□□□□□ -1.71
RBM39-228ENST00000471635 PGM5Q15124 567 aa4.39□□□□□ -1.71
RBM39-228ENST00000471635 LIPMQ5VYY2 423 aa4.39□□□□□ -1.71
RBM39-228ENST00000471635 USP17L6PQ6QN14 398 aa4.39□□□□□ -1.71
RBM39-228ENST00000471635 PIK3AP1Q6ZUJ8 805 aa4.39□□□□□ -1.71
RBM39-228ENST00000471635 BEND5Q7L4P6 421 aa4.39□□□□□ -1.71
RBM39-228ENST00000471635 RNF152Q8N8N0 203 aa4.39□□□□□ -1.71
RBM39-228ENST00000471635 B4GALNT2Q8NHY0 566 aa4.39□□□□□ -1.71
RBM39-228ENST00000471635 OVCA2Q8WZ82 227 aa4.39□□□□□ -1.71
RBM39-228ENST00000471635 EME1Q96AY2 570 aa4.39□□□□□ -1.71
RBM39-228ENST00000471635 ZPBPQ9BS86 351 aa4.39□□□□□ -1.71
RBM39-228ENST00000471635 ELOVL1Q9BW60 279 aa4.39□□□□□ -1.71
RBM39-228ENST00000471635 MYO1AQ9UBC5 1043 aa4.39□□□□□ -1.71
RBM39-228ENST00000471635 UTS2RQ9UKP6 389 aa4.39□□□□□ -1.71
RBM39-228ENST00000471635 PROCRQ9UNN8 238 aa4.39□□□□□ -1.71
RBM39-228ENST00000471635 FAM50BQ9Y247 325 aa4.39□□□□□ -1.71
RBM39-228ENST00000471635 SPATA31A5Q5VU36 1347 aa4.39□□□□□ -1.71
RBM39-228ENST00000471635 SPATA31A7Q8IWB4 1347 aa4.39□□□□□ -1.71
RBM39-228ENST00000471635 KIR2DS5A0A0G2JLQ3 304 aa4.38□□□□□ -1.71
RBM39-228ENST00000471635 KIR2DS3K7RE56 304 aa4.38□□□□□ -1.71
RBM39-228ENST00000471635 M0QZQ0 153 aa4.38□□□□□ -1.71
RBM39-228ENST00000471635 APOL1O14791 398 aa4.38□□□□□ -1.71
RBM39-228ENST00000471635 ATG13O75143 517 aa4.38□□□□□ -1.71
RBM39-228ENST00000471635 CHRNB1P11230 501 aa4.38□□□□□ -1.71
RBM39-228ENST00000471635 IDEP14735 1019 aa4.38□□□□□ -1.71
RBM39-228ENST00000471635 STT3AP46977 705 aa4.38□□□□□ -1.71
RBM39-228ENST00000471635 CASP5P51878 434 aa4.38□□□□□ -1.71
RBM39-228ENST00000471635 P2RX3P56373 397 aa4.38□□□□□ -1.71
RBM39-228ENST00000471635 DLGAP5Q15398 846 aa4.38□□□□□ -1.71
RBM39-228ENST00000471635 SLC5A9Q2M3M2 681 aa4.38□□□□□ -1.71
RBM39-228ENST00000471635 ZNF585BQ52M93 769 aa4.38□□□□□ -1.71
RBM39-228ENST00000471635 GLE1Q53GS7 698 aaKnown RBP4.38□□□□□ -1.71
RBM39-228ENST00000471635 DLK2Q6UY11 383 aa4.38□□□□□ -1.71
RBM39-228ENST00000471635 TRAPPC11Q7Z392 1133 aa4.38□□□□□ -1.71
RBM39-228ENST00000471635 KRT27Q7Z3Y8 459 aa4.38□□□□□ -1.71
RBM39-228ENST00000471635 SKAP1Q86WV1 359 aa4.38□□□□□ -1.71
RBM39-228ENST00000471635 GLMPQ8WWB7 406 aa4.38□□□□□ -1.71
RBM39-228ENST00000471635 PMM1Q92871 262 aa4.38□□□□□ -1.71
RBM39-228ENST00000471635 SNX27Q96L92 541 aa4.38□□□□□ -1.71
RBM39-228ENST00000471635 GPR78Q96P69 363 aa4.38□□□□□ -1.71
RBM39-228ENST00000471635 HTATIP2Q9BUP3 242 aa4.38□□□□□ -1.71
RBM39-228ENST00000471635 DDX21Q9NR30 783 aaKnown RBP eCLIP4.38□□□□□ -1.71
RBM39-228ENST00000471635 RXFP3Q9NSD7 469 aa4.38□□□□□ -1.71
RBM39-228ENST00000471635 ZNF112Q9UJU3 913 aa4.38□□□□□ -1.71
RBM39-228ENST00000471635 ZNF335Q9H4Z2 1342 aaPredicted RBP4.38□□□□□ -1.71
RBM39-228ENST00000471635 A0A1W2PPC4 97 aa4.37□□□□□ -1.71
RBM39-228ENST00000471635 A6NNC1 897 aa4.37□□□□□ -1.71
RBM39-228ENST00000471635 VIPP01282 170 aa4.37□□□□□ -1.71
RBM39-228ENST00000471635 HOXB2P14652 356 aa4.37□□□□□ -1.71
RBM39-228ENST00000471635 GABRB3P28472 473 aa4.37□□□□□ -1.71
RBM39-228ENST00000471635 POLD2P49005 469 aa4.37□□□□□ -1.71
RBM39-228ENST00000471635 PRIM2P49643 509 aa4.37□□□□□ -1.71
RBM39-228ENST00000471635 GAD2Q05329 585 aa4.37□□□□□ -1.71
RBM39-228ENST00000471635 C6orf10Q5SRN2 563 aa4.37□□□□□ -1.71
RBM39-228ENST00000471635 ZNF474Q6S9Z5 364 aaPredicted RBP4.37□□□□□ -1.71
RBM39-228ENST00000471635 C16orf89Q6UX73 402 aa4.37□□□□□ -1.71
RBM39-228ENST00000471635 DGKHQ86XP1 1220 aa4.37□□□□□ -1.71
RBM39-228ENST00000471635 LAS2Q8IYD9 372 aa4.37□□□□□ -1.71
RBM39-228ENST00000471635 ZFPM2Q8WW38 1151 aa4.37□□□□□ -1.71
RBM39-228ENST00000471635 ZNF479Q96JC4 524 aa4.37□□□□□ -1.71
RBM39-228ENST00000471635 PRDM16Q9HAZ2 1276 aa4.37□□□□□ -1.71
RBM39-228ENST00000471635 FZD3Q9NPG1 666 aa4.37□□□□□ -1.71
RBM39-228ENST00000471635 B3GNT3Q9Y2A9 372 aa4.37□□□□□ -1.71
RBM39-228ENST00000471635 MAN2B2Q9Y2E5 1009 aa4.37□□□□□ -1.71
RBM39-228ENST00000471635 DPPA5A6NC42 116 aa4.36□□□□□ -1.71
RBM39-228ENST00000471635 OR2W5A6NFC9 320 aa4.36□□□□□ -1.71
RBM39-228ENST00000471635 H0YGN5 161 aa4.36□□□□□ -1.71
RBM39-228ENST00000471635 NGFRP08138 427 aa4.36□□□□□ -1.71
RBM39-228ENST00000471635 SRGAP2BP0DMP2 458 aa4.36□□□□□ -1.71
RBM39-228ENST00000471635 EGR1P18146 543 aa4.36□□□□□ -1.71
RBM39-228ENST00000471635 TBXAS1P24557 533 aaPredicted RBP4.36□□□□□ -1.71
RBM39-228ENST00000471635 CIITAP33076 1130 aa4.36□□□□□ -1.71
RBM39-228ENST00000471635 PGGT1BP53609 377 aa4.36□□□□□ -1.71
RBM39-228ENST00000471635 CBFBQ13951 182 aa4.36□□□□□ -1.71
RBM39-228ENST00000471635 PIK3CD-AS1Q5SR53 167 aa4.36□□□□□ -1.71
RBM39-228ENST00000471635 FMNL3Q8IVF7 1028 aa4.36□□□□□ -1.71
RBM39-228ENST00000471635 DDIASQ8IXT1 998 aa4.36□□□□□ -1.71
RBM39-228ENST00000471635 TXLNBQ8N3L3 684 aa4.36□□□□□ -1.71
RBM39-228ENST00000471635 ZBTB8BQ8NAP8 495 aaPredicted RBP4.36□□□□□ -1.71
RBM39-228ENST00000471635 CTAGE1Q96RT6 745 aa4.36□□□□□ -1.71
RBM39-228ENST00000471635 TBCBQ99426 244 aa4.36□□□□□ -1.71
RBM39-228ENST00000471635 ABHD14AQ9BUJ0 271 aa4.36□□□□□ -1.71
RBM39-228ENST00000471635 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.36□□□□□ -1.716e-18■□□□□ 9.4
RBM39-228ENST00000471635 RBM38Q9H0Z9 239 aaKnown RBP4.36□□□□□ -1.71
RBM39-228ENST00000471635 ERVK-5Q9HDB9 667 aa4.36□□□□□ -1.71
RBM39-228ENST00000471635 KLHL42Q9P2K6 505 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms