RNA–Protein interactions for RNA: ENST00000471572.6

NF1-208, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 2,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-208ENST00000471572 KAT14Q9H8E8 782 aa6.52□□□□□ -1.37
NF1-208ENST00000471572 XPO7Q9UIA9 1087 aaKnown RBP6.52□□□□□ -1.37
NF1-208ENST00000471572 USP22Q9UPT9 525 aa6.52□□□□□ -1.37
NF1-208ENST00000471572 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.52□□□□□ -1.37
NF1-208ENST00000471572 UGGT2Q9NYU1 1516 aa6.52□□□□□ -1.37
NF1-208ENST00000471572 TNIKQ9UKE5 1360 aa6.52□□□□□ -1.37
NF1-208ENST00000471572 A0A1W2PQF6 199 aa6.52□□□□□ -1.37
NF1-208ENST00000471572 SYNCRIPO60506 623 aaKnown RBP6.52□□□□□ -1.37
NF1-208ENST00000471572 SNRNP70P08621 437 aaKnown RBP6.52□□□□□ -1.37
NF1-208ENST00000471572 TTKP33981 857 aa6.52□□□□□ -1.37
NF1-208ENST00000471572 KRT2P35908 639 aa6.52□□□□□ -1.37
NF1-208ENST00000471572 MAPKAPK2P49137 400 aa6.52□□□□□ -1.37
NF1-208ENST00000471572 RAP2BP61225 183 aa6.52□□□□□ -1.37
NF1-208ENST00000471572 CEBPZQ03701 1054 aaKnown RBP6.52□□□□□ -1.37
NF1-208ENST00000471572 SLC14A1Q13336 389 aa6.52□□□□□ -1.37
NF1-208ENST00000471572 LASP1Q14847 261 aaKnown RBP6.52□□□□□ -1.37
NF1-208ENST00000471572 NR1I3Q14994 352 aa6.52□□□□□ -1.37
NF1-208ENST00000471572 P3H1Q32P28 736 aa6.52□□□□□ -1.37
NF1-208ENST00000471572 C5orf22Q49AR2 442 aa6.52□□□□□ -1.37
NF1-208ENST00000471572 MPP7Q5T2T1 576 aa6.52□□□□□ -1.37
NF1-208ENST00000471572 USP51Q70EK9 711 aa6.52□□□□□ -1.37
NF1-208ENST00000471572 CCDC105Q8IYK2 499 aa6.52□□□□□ -1.37
NF1-208ENST00000471572 IL17RCQ8NAC3 791 aa6.52□□□□□ -1.37
NF1-208ENST00000471572 EXOC4Q96A65 974 aa6.52□□□□□ -1.37
NF1-208ENST00000471572 CITED2Q99967 270 aaPredicted RBP6.52□□□□□ -1.37
NF1-208ENST00000471572 ENKD1Q9H0I2 346 aa6.52□□□□□ -1.37
NF1-208ENST00000471572 POLR1BQ9H9Y6 1135 aa6.52□□□□□ -1.37
NF1-208ENST00000471572 PIM2Q9P1W9 311 aa6.52□□□□□ -1.37
NF1-208ENST00000471572 CPSF2Q9P2I0 782 aaKnown RBP6.52□□□□□ -1.37
NF1-208ENST00000471572 VAV3Q9UKW4 847 aa6.52□□□□□ -1.37
NF1-208ENST00000471572 ENTPD2Q9Y5L3 495 aa6.52□□□□□ -1.37
NF1-208ENST00000471572 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.51□□□□□ -1.37
NF1-208ENST00000471572 GLOD5A6NK44 160 aa6.51□□□□□ -1.37
NF1-208ENST00000471572 BCAT2O15382 392 aaPredicted RBP6.51□□□□□ -1.37
NF1-208ENST00000471572 TRIM13O60858 407 aa6.51□□□□□ -1.37
NF1-208ENST00000471572 SEC14L2O76054 403 aa6.51□□□□□ -1.37
NF1-208ENST00000471572 FTCDO95954 541 aa6.51□□□□□ -1.37
NF1-208ENST00000471572 HPXP02790 462 aa6.51□□□□□ -1.37
NF1-208ENST00000471572 HMGCRP04035 888 aa6.51□□□□□ -1.37
NF1-208ENST00000471572 MSX2P35548 267 aaPredicted RBP6.51□□□□□ -1.37
NF1-208ENST00000471572 MC3RP41968 323 aa6.51□□□□□ -1.37
NF1-208ENST00000471572 CAPZA2P47755 286 aa6.51□□□□□ -1.37
NF1-208ENST00000471572 ITGA1P56199 1179 aa6.51□□□□□ -1.37
NF1-208ENST00000471572 UBASH3AP57075 661 aa6.51□□□□□ -1.37
NF1-208ENST00000471572 ACTN3Q08043 901 aaPredicted RBP6.51□□□□□ -1.37
NF1-208ENST00000471572 TOP3AQ13472 1001 aaPredicted RBP6.51□□□□□ -1.37
NF1-208ENST00000471572 THOC5Q13769 683 aaKnown RBP6.51□□□□□ -1.37
NF1-208ENST00000471572 RAB3GAP1Q15042 981 aa6.51□□□□□ -1.37
NF1-208ENST00000471572 METTL23Q86XA0 190 aa6.51□□□□□ -1.37
NF1-208ENST00000471572 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.51□□□□□ -1.37
NF1-208ENST00000471572 TMEFF1Q8IYR6 380 aa6.51□□□□□ -1.37
NF1-208ENST00000471572 TMEM171Q8WVE6 324 aa6.51□□□□□ -1.37
NF1-208ENST00000471572 INTS12Q96CB8 462 aaKnown RBP6.51□□□□□ -1.37
NF1-208ENST00000471572 FAM84AQ96KN4 292 aa6.51□□□□□ -1.37
NF1-208ENST00000471572 PHACTR3Q96KR7 559 aa6.51□□□□□ -1.37
NF1-208ENST00000471572 HIST1H2AAQ96QV6 131 aa6.51□□□□□ -1.37
NF1-208ENST00000471572 THUMPD3Q9BV44 507 aaKnown RBP6.51□□□□□ -1.37
NF1-208ENST00000471572 CTDSP1Q9GZU7 261 aa6.51□□□□□ -1.37
NF1-208ENST00000471572 CLPBQ9H078 707 aa6.51□□□□□ -1.37
NF1-208ENST00000471572 COPS7BQ9H9Q2 264 aaPredicted RBP6.51□□□□□ -1.37
NF1-208ENST00000471572 CYP4F11Q9HBI6 524 aa6.51□□□□□ -1.37
NF1-208ENST00000471572 EHD2Q9NZN4 543 aa6.51□□□□□ -1.37
NF1-208ENST00000471572 CD207Q9UJ71 328 aa6.51□□□□□ -1.37
NF1-208ENST00000471572 RAB21Q9UL25 225 aa6.51□□□□□ -1.37
NF1-208ENST00000471572 TRPC5Q9UL62 973 aaPredicted RBP6.51□□□□□ -1.37
NF1-208ENST00000471572 SHOC2Q9UQ13 582 aa6.51□□□□□ -1.37
NF1-208ENST00000471572 PTRH2Q9Y3E5 179 aaKnown RBP6.51□□□□□ -1.37
NF1-208ENST00000471572 IQGAP2Q13576 1575 aa6.51□□□□□ -1.37
NF1-208ENST00000471572 PTPRGP23470 1445 aa6.51□□□□□ -1.37
NF1-208ENST00000471572 TTC36A6NLP5 189 aa6.5□□□□□ -1.37
NF1-208ENST00000471572 DDX39AO00148 427 aaKnown RBP6.5□□□□□ -1.37
NF1-208ENST00000471572 CTIFO43310 598 aaKnown RBP6.5□□□□□ -1.37
NF1-208ENST00000471572 PRSS23O95084 383 aa6.5□□□□□ -1.37
NF1-208ENST00000471572 AMHP03971 560 aa6.5□□□□□ -1.37
NF1-208ENST00000471572 THBS4P35443 961 aa6.5□□□□□ -1.37
NF1-208ENST00000471572 GPD2P43304 727 aa6.5□□□□□ -1.37
NF1-208ENST00000471572 CPA2P48052 419 aa6.5□□□□□ -1.37
NF1-208ENST00000471572 NRIP1P48552 1158 aa6.5□□□□□ -1.37
NF1-208ENST00000471572 PGDP52209 483 aa6.5□□□□□ -1.37
NF1-208ENST00000471572 ADAM8P78325 824 aa6.5□□□□□ -1.37
NF1-208ENST00000471572 MRPS5P82675 430 aaKnown RBP6.5□□□□□ -1.37
NF1-208ENST00000471572 PTH1RQ03431 593 aa6.5□□□□□ -1.37
NF1-208ENST00000471572 SEMA3AQ14563 771 aa6.5□□□□□ -1.37
NF1-208ENST00000471572 NAA25Q14CX7 972 aa6.5□□□□□ -1.37
NF1-208ENST00000471572 TBRG1Q3YBR2 411 aa6.5□□□□□ -1.37
NF1-208ENST00000471572 GKAP1Q5VSY0 366 aaPredicted RBP6.5□□□□□ -1.37
NF1-208ENST00000471572 PRR23CQ6ZRP0 262 aa6.5□□□□□ -1.37
NF1-208ENST00000471572 CLEC17AQ6ZS10 378 aa6.5□□□□□ -1.37
NF1-208ENST00000471572 IGDCC3Q8IVU1 814 aa6.5□□□□□ -1.37
NF1-208ENST00000471572 ZNF366Q8N895 744 aa6.5□□□□□ -1.37
NF1-208ENST00000471572 POMGNT2Q8NAT1 580 aa6.5□□□□□ -1.37
NF1-208ENST00000471572 NSUN7Q8NE18 718 aaKnown RBP6.5□□□□□ -1.37
NF1-208ENST00000471572 OR5M3Q8NGP4 307 aa6.5□□□□□ -1.37
NF1-208ENST00000471572 ARHGEF2Q92974 986 aaKnown RBP6.5□□□□□ -1.37
NF1-208ENST00000471572 ARRDC3Q96B67 414 aa6.5□□□□□ -1.37
NF1-208ENST00000471572 LRIG1Q96JA1 1093 aa6.5□□□□□ -1.37
NF1-208ENST00000471572 MOGAT1Q96PD6 335 aa6.5□□□□□ -1.37
NF1-208ENST00000471572 AGAP2Q99490 1192 aa6.5□□□□□ -1.37
NF1-208ENST00000471572 SMOC2Q9H3U7 446 aa6.5□□□□□ -1.37
NF1-208ENST00000471572 TBCCD1Q9NVR7 557 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms