RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 ANO9A1A5B4 782 aa6.39□□□□□ -1.39
CCDC39-202ENST00000471307 FAM90A10PA6NDY2 464 aa6.39□□□□□ -1.39
CCDC39-202ENST00000471307 C2CD4BA6NLJ0 364 aa6.39□□□□□ -1.39
CCDC39-202ENST00000471307 PMM2O15305 246 aa6.39□□□□□ -1.39
CCDC39-202ENST00000471307 OAZ2O95190 189 aa6.39□□□□□ -1.39
CCDC39-202ENST00000471307 GSTM5P46439 218 aa6.39□□□□□ -1.39
CCDC39-202ENST00000471307 B4GALNT1Q00973 533 aa6.39□□□□□ -1.39
CCDC39-202ENST00000471307 MAPKAPK3Q16644 382 aa6.39□□□□□ -1.39
CCDC39-202ENST00000471307 RAP1GAP2Q684P5 730 aa6.39□□□□□ -1.39
CCDC39-202ENST00000471307 ACSM6Q6P461 480 aa6.39□□□□□ -1.39
CCDC39-202ENST00000471307 FAM57BQ71RH2 274 aa6.39□□□□□ -1.39
CCDC39-202ENST00000471307 TFAP2DQ7Z6R9 452 aa6.39□□□□□ -1.39
CCDC39-202ENST00000471307 CCAR1Q8IX12 1150 aaKnown RBP6.39□□□□□ -1.39
CCDC39-202ENST00000471307 TBCBQ99426 244 aa6.39□□□□□ -1.39
CCDC39-202ENST00000471307 WACQ9BTA9 647 aa6.39□□□□□ -1.39
CCDC39-202ENST00000471307 GATA5Q9BWX5 397 aaPredicted RBP6.39□□□□□ -1.39
CCDC39-202ENST00000471307 FOXP1Q9H334 677 aaPredicted RBP6.39□□□□□ -1.39
CCDC39-202ENST00000471307 RGL1Q9NZL6 768 aa6.39□□□□□ -1.39
CCDC39-202ENST00000471307 MAN2B2Q9Y2E5 1009 aa6.39□□□□□ -1.39
CCDC39-202ENST00000471307 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.39□□□□□ -1.39
CCDC39-202ENST00000471307 C16orf96A6NNT2 1141 aa6.38□□□□□ -1.39
CCDC39-202ENST00000471307 PRYO14603 147 aa6.38□□□□□ -1.39
CCDC39-202ENST00000471307 APAF1O14727 1248 aa6.38□□□□□ -1.39
CCDC39-202ENST00000471307 TULP3O75386 442 aa6.38□□□□□ -1.39
CCDC39-202ENST00000471307 FGF18O76093 207 aa6.38□□□□□ -1.39
CCDC39-202ENST00000471307 SGPL1O95470 568 aa6.38□□□□□ -1.39
CCDC39-202ENST00000471307 TFEBP19484 476 aa6.38□□□□□ -1.39
CCDC39-202ENST00000471307 HOXA7P31268 230 aaPredicted RBP6.38□□□□□ -1.39
CCDC39-202ENST00000471307 TM4SF4P48230 202 aa6.38□□□□□ -1.39
CCDC39-202ENST00000471307 BFSP2Q13515 415 aa6.38□□□□□ -1.39
CCDC39-202ENST00000471307 CCDC144NLQ6NUI1 221 aa6.38□□□□□ -1.39
CCDC39-202ENST00000471307 WIPF2Q8TF74 440 aaPredicted RBP6.38□□□□□ -1.39
CCDC39-202ENST00000471307 NSMCE1Q8WV22 266 aa6.38□□□□□ -1.39
CCDC39-202ENST00000471307 TRMT61AQ96FX7 289 aaKnown RBP6.38□□□□□ -1.39
CCDC39-202ENST00000471307 ZNF845Q96IR2 970 aaPredicted RBP6.38□□□□□ -1.39
CCDC39-202ENST00000471307 NAA15Q9BXJ9 866 aaKnown RBP6.38□□□□□ -1.39
CCDC39-202ENST00000471307 VPS4AQ9UN37 437 aa6.38□□□□□ -1.39
CCDC39-202ENST00000471307 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.38□□□□□ -1.39
CCDC39-202ENST00000471307 PCDHB2Q9Y5E7 798 aa6.38□□□□□ -1.39
CCDC39-202ENST00000471307 PLCH2O75038 1416 aa6.38□□□□□ -1.39
CCDC39-202ENST00000471307 ITSN2Q9NZM3 1697 aa6.38□□□□□ -1.39
CCDC39-202ENST00000471307 ABCA9Q8IUA7 1624 aa6.37□□□□□ -1.39
CCDC39-202ENST00000471307 TCOF1Q13428 1488 aaKnown RBP6.37□□□□□ -1.39
CCDC39-202ENST00000471307 ZNF335Q9H4Z2 1342 aaPredicted RBP6.37□□□□□ -1.39
CCDC39-202ENST00000471307 CYP19A1P11511 503 aaPredicted RBP6.37□□□□□ -1.39
CCDC39-202ENST00000471307 SCP2P22307 547 aa6.37□□□□□ -1.39
CCDC39-202ENST00000471307 NDUFS1P28331 727 aa6.37□□□□□ -1.39
CCDC39-202ENST00000471307 IDUAP35475 653 aa6.37□□□□□ -1.39
CCDC39-202ENST00000471307 VPS41P49754 854 aa6.37□□□□□ -1.39
CCDC39-202ENST00000471307 MTX1Q13505 466 aa6.37□□□□□ -1.39
CCDC39-202ENST00000471307 HIBCHQ6NVY1 386 aaPredicted RBP6.37□□□□□ -1.39
CCDC39-202ENST00000471307 ZNF517Q6ZMY9 492 aaPredicted RBP6.37□□□□□ -1.39
CCDC39-202ENST00000471307 ZNF793Q6ZN11 406 aa6.37□□□□□ -1.39
CCDC39-202ENST00000471307 PIM3Q86V86 326 aa6.37□□□□□ -1.39
CCDC39-202ENST00000471307 TXLNBQ8N3L3 684 aa6.37□□□□□ -1.39
CCDC39-202ENST00000471307 CELF1Q92879 486 aaKnown RBP6.37□□□□□ -1.39
CCDC39-202ENST00000471307 GJA10Q969M2 543 aa6.37□□□□□ -1.39
CCDC39-202ENST00000471307 CCDC136Q96JN2 1154 aa6.37□□□□□ -1.39
CCDC39-202ENST00000471307 EIF3CQ99613 913 aaKnown RBP6.37□□□□□ -1.39
CCDC39-202ENST00000471307 TUBB6Q9BUF5 446 aa6.37□□□□□ -1.39
CCDC39-202ENST00000471307 CDCP1Q9H5V8 836 aa6.37□□□□□ -1.39
CCDC39-202ENST00000471307 ERVK-5Q9HDB9 667 aa6.37□□□□□ -1.39
CCDC39-202ENST00000471307 NECTIN3Q9NQS3 549 aa6.37□□□□□ -1.39
CCDC39-202ENST00000471307 PAPOLBQ9NRJ5 636 aaKnown RBP6.37□□□□□ -1.39
CCDC39-202ENST00000471307 TMEM45AQ9NWC5 275 aa6.37□□□□□ -1.39
CCDC39-202ENST00000471307 ASNSD1Q9NWL6 643 aa6.37□□□□□ -1.39
CCDC39-202ENST00000471307 CDC42BPAQ5VT25 1732 aa6.36□□□□□ -1.39
CCDC39-202ENST00000471307 GLI2P10070 1586 aa6.36□□□□□ -1.39
CCDC39-202ENST00000471307 ARAP3Q8WWN8 1544 aa6.36□□□□□ -1.39
CCDC39-202ENST00000471307 CD109Q6YHK3 1445 aa6.36□□□□□ -1.39
CCDC39-202ENST00000471307 CCDC187A0A096LP49 1063 aa6.36□□□□□ -1.39
CCDC39-202ENST00000471307 SLC22A23A1A5C7 686 aa6.36□□□□□ -1.39
CCDC39-202ENST00000471307 F8W810 466 aa6.36□□□□□ -1.39
CCDC39-202ENST00000471307 TRIM38O00635 465 aa6.36□□□□□ -1.39
CCDC39-202ENST00000471307 CTIFO43310 598 aaKnown RBP6.36□□□□□ -1.39
CCDC39-202ENST00000471307 NDST3O95803 873 aa6.36□□□□□ -1.39
CCDC39-202ENST00000471307 SLC8A1P32418 973 aa6.36□□□□□ -1.39
CCDC39-202ENST00000471307 MTA1Q13330 715 aa6.36□□□□□ -1.39
CCDC39-202ENST00000471307 FHL1Q13642 323 aa6.36□□□□□ -1.39
CCDC39-202ENST00000471307 PIK3AP1Q6ZUJ8 805 aa6.36□□□□□ -1.39
CCDC39-202ENST00000471307 TTC30AQ86WT1 665 aa6.36□□□□□ -1.39
CCDC39-202ENST00000471307 RFX6Q8HWS3 928 aa6.36□□□□□ -1.39
CCDC39-202ENST00000471307 GLIS1Q8NBF1 620 aa6.36□□□□□ -1.39
CCDC39-202ENST00000471307 ASB12Q8WXK4 309 aa6.36□□□□□ -1.39
CCDC39-202ENST00000471307 MLXIPLQ9NP71 852 aa6.36□□□□□ -1.39
CCDC39-202ENST00000471307 HELLSQ9NRZ9 838 aa6.36□□□□□ -1.39
CCDC39-202ENST00000471307 GJB4Q9NTQ9 266 aa6.36□□□□□ -1.39
CCDC39-202ENST00000471307 MYO5CQ9NQX4 1742 aa6.36□□□□□ -1.39
CCDC39-202ENST00000471307 CDC42BPBQ9Y5S2 1711 aa6.36□□□□□ -1.39
CCDC39-202ENST00000471307 PTPN23Q9H3S7 1636 aa6.36□□□□□ -1.39
CCDC39-202ENST00000471307 TTC37Q6PGP7 1564 aa6.35□□□□□ -1.39
CCDC39-202ENST00000471307 ZNF644Q9H582 1327 aaPredicted RBP6.35□□□□□ -1.39
CCDC39-202ENST00000471307 GXYLT2A0PJZ3 443 aa6.35□□□□□ -1.39
CCDC39-202ENST00000471307 RASA4BC9J798 803 aa6.35□□□□□ -1.39
CCDC39-202ENST00000471307 IKBKBO14920 756 aa6.35□□□□□ -1.39
CCDC39-202ENST00000471307 HNRNPDLO14979 420 aaKnown RBP6.35□□□□□ -1.39
CCDC39-202ENST00000471307 RASA4O43374 803 aa6.35□□□□□ -1.39
CCDC39-202ENST00000471307 ENO1P06733 434 aaKnown RBP6.35□□□□□ -1.39
CCDC39-202ENST00000471307 PECAM1P16284 738 aaPredicted RBP6.35□□□□□ -1.39
CCDC39-202ENST00000471307 TNFSF4P23510 183 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms