RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 ACSL4O60488 711 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 FDPSP14324 419 aaKnown RBP8.92□□□□□ -0.98
HPS4-209ENST00000466781 SLC2A4P14672 509 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 CPA2P48052 419 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 AKAP12Q02952 1782 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 KRR1Q13601 381 aaKnown RBP8.92□□□□□ -0.98
HPS4-209ENST00000466781 TCEAL5Q5H9L2 206 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 OVOS1Q6IE37 1185 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 TYW3Q6IPR3 259 aaKnown RBP8.92□□□□□ -0.98
HPS4-209ENST00000466781 FBXO36Q8NEA4 188 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 C19orf18Q8NEA5 215 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 SYTL5Q8TDW5 730 aaPredicted RBP8.92□□□□□ -0.98
HPS4-209ENST00000466781 CNPY3Q9BT09 278 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 EPC1Q9H2F5 836 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 RBM12Q9NTZ6 932 aaKnown RBP8.92□□□□□ -0.98
HPS4-209ENST00000466781 COMMD8Q9NX08 183 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 SH3BP4Q9P0V3 963 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 H3BMM5 538 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 TRIM66O15016 1216 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 CNOT3O75175 753 aaKnown RBP8.92□□□□□ -0.98
HPS4-209ENST00000466781 IL2P60568 153 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 PSMC6P62333 389 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 XRCC4Q13426 336 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 ALG11Q2TAA5 492 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 GJC2Q5T442 439 aaPredicted RBP8.92□□□□□ -0.98
HPS4-209ENST00000466781 FAM171A1Q5VUB5 890 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 SEL1L3Q68CR1 1132 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 CES5AQ6NT32 575 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 TRPM8Q7Z2W7 1104 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 RIOX2Q8IUF8 465 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 ZFPM1Q8IX07 1006 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 SYN2Q92777 582 aaPredicted RBP8.92□□□□□ -0.98
HPS4-209ENST00000466781 DTNBP1Q96EV8 351 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 SEC16BQ96JE7 1060 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 OSMRQ99650 979 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 OMDQ99983 421 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 CELF4Q9BZC1 486 aaKnown RBP8.92□□□□□ -0.98
HPS4-209ENST00000466781 SNTG2Q9NY99 539 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 COQ6Q9Y2Z9 468 aa8.92□□□□□ -0.98
HPS4-209ENST00000466781 TPST1O60507 370 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 CLK3P49761 638 aaKnown RBP8.91□□□□□ -0.98
HPS4-209ENST00000466781 STK4Q13043 487 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 CSHL1Q14406 222 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 OLFML2BQ68BL8 750 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 FAM45BPQ6NSW5 357 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 SLC30A10Q6XR72 485 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 OR2W6PQ8NHA6 318 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 CXorf40AQ8TE69 158 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 ASZ1Q8WWH4 475 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 APBA2Q99767 749 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 ERP44Q9BS26 406 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 ZNF518BQ9C0D4 1074 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 CHORDC1Q9UHD1 332 aaPredicted RBP8.91□□□□□ -0.98
HPS4-209ENST00000466781 USP18Q9UMW8 372 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 MPOP05164 745 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 FGRP09769 529 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 TPBGLP0DKB5 382 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 SREBF1P36956 1147 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 TERF2Q15554 542 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 SETMARQ53H47 684 aaPredicted RBP8.91□□□□□ -0.98
HPS4-209ENST00000466781 NECAB2Q7Z6G3 386 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 TDRD5Q8NAT2 981 aaKnown RBP8.91□□□□□ -0.98
HPS4-209ENST00000466781 SYT15Q9BQS2 421 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 SETD4Q9NVD3 440 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 FAM198AQ9UFP1 575 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 POLG2Q9UHN1 485 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 ENTPD4Q9Y227 616 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 CHD2O14647 1828 aaKnown RBP8.91□□□□□ -0.98
HPS4-209ENST00000466781 KRT33AO76009 404 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 KRT6AP02538 564 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 KRT6BP04259 564 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 HPCAL1P37235 193 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 RXRGP48443 463 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 KRT6CP48668 564 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 PEX5P50542 639 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 DSG1Q02413 1049 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 KLC1Q07866 573 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 TRAF2Q12933 501 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 DGKZQ13574 1117 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 BOP1Q14137 746 aaKnown RBP8.91□□□□□ -0.98
HPS4-209ENST00000466781 USP49Q70CQ1 688 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 ATG16L2Q8NAA4 619 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 MAGEC3Q8TD91 643 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 RNFT2Q96EX2 444 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 HDHD2Q9H0R4 259 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 THAP2Q9H0W7 228 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 ATP13A1Q9HD20 1204 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 N6AMT1Q9Y5N5 214 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 MRC1P22897 1456 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 MYOM1P52179 1685 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 FAM208AQ9UK61 1670 aaKnown RBP8.91□□□□□ -0.98
HPS4-209ENST00000466781 CARNS1A5YM72 827 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 UBTFL6P0CB48 400 aaPredicted RBP8.91□□□□□ -0.98
HPS4-209ENST00000466781 KCNJ1P48048 391 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 CCR4P51679 360 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 ATP12AP54707 1039 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 PURAQ00577 322 aaKnown RBP8.91□□□□□ -0.98
HPS4-209ENST00000466781 STX4Q12846 297 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 NR6A1Q15406 480 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 TMEM26Q6ZUK4 368 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms