RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-223	ENST00000465278	LTV1	Q96GA3	475 aa	Predicted RBP	5.81	□□□□□ -1.48
CACNA1C-223	ENST00000465278	FBXL20	Q96IG2	436 aa		5.81	□□□□□ -1.48
CACNA1C-223	ENST00000465278	ZBTB45	Q96K62	511 aa	Predicted RBP	5.81	□□□□□ -1.48
CACNA1C-223	ENST00000465278	ARPC5L	Q9BPX5	153 aa		5.81	□□□□□ -1.48
CACNA1C-223	ENST00000465278	DNMT3B	Q9UBC3	853 aa	Known RBP	5.81	□□□□□ -1.48
CACNA1C-223	ENST00000465278	DKK4	Q9UBT3	224 aa		5.81	□□□□□ -1.48
CACNA1C-223	ENST00000465278	PADI4	Q9UM07	663 aa		5.81	□□□□□ -1.48
CACNA1C-223	ENST00000465278	CDY1	Q9Y6F8	540 aa		5.81	□□□□□ -1.48
CACNA1C-223	ENST00000465278	CENPJ	Q9HC77	1338 aa	Predicted RBP	5.8	□□□□□ -1.48
CACNA1C-223	ENST00000465278	VWC2L	B2RUY7	222 aa		5.8	□□□□□ -1.48
CACNA1C-223	ENST00000465278	CLGN	O14967	610 aa		5.8	□□□□□ -1.48
CACNA1C-223	ENST00000465278	PPFIA4	O75335	1185 aa		5.8	□□□□□ -1.48
CACNA1C-223	ENST00000465278	PIAS2	O75928	621 aa		5.8	□□□□□ -1.48
CACNA1C-223	ENST00000465278	CAMTA2	O94983	1202 aa		5.8	□□□□□ -1.48
CACNA1C-223	ENST00000465278	NDST3	O95803	873 aa		5.8	□□□□□ -1.48
CACNA1C-223	ENST00000465278	CSF1R	P07333	972 aa		5.8	□□□□□ -1.48
CACNA1C-223	ENST00000465278	PPM1A	P35813	382 aa		5.8	□□□□□ -1.48
CACNA1C-223	ENST00000465278	HSPA7	P48741	367 aa		5.8	□□□□□ -1.48
CACNA1C-223	ENST00000465278	CHAF1A	Q13111	956 aa	Predicted RBP	5.8	□□□□□ -1.48
CACNA1C-223	ENST00000465278	TBCC	Q15814	346 aa		5.8	□□□□□ -1.48
CACNA1C-223	ENST00000465278	SLC35G1	Q2M3R5	365 aa		5.8	□□□□□ -1.48
CACNA1C-223	ENST00000465278	ZNF750	Q32MQ0	723 aa		5.8	□□□□□ -1.48
CACNA1C-223	ENST00000465278	USP49	Q70CQ1	688 aa		5.8	□□□□□ -1.48
CACNA1C-223	ENST00000465278	SYTL1	Q8IYJ3	562 aa		5.8	□□□□□ -1.48
CACNA1C-223	ENST00000465278	LNX2	Q8N448	690 aa		5.8	□□□□□ -1.48
CACNA1C-223	ENST00000465278	FAM109A	Q8N4B1	249 aa		5.8	□□□□□ -1.48
CACNA1C-223	ENST00000465278	CNBD1	Q8NA66	436 aa		5.8	□□□□□ -1.48
CACNA1C-223	ENST00000465278	CCDC150	Q8NCX0	1101 aa		5.8	□□□□□ -1.48
CACNA1C-223	ENST00000465278	TFAP2B	Q92481	460 aa		5.8	□□□□□ -1.48
CACNA1C-223	ENST00000465278	LARP4B	Q92615	738 aa	Known RBP	5.8	□□□□□ -1.48
CACNA1C-223	ENST00000465278	CAVIN3	Q969G5	261 aa		5.8	□□□□□ -1.48
CACNA1C-223	ENST00000465278	LBHD1	Q9BQE6	289 aa	Predicted RBP	5.8	□□□□□ -1.48
CACNA1C-223	ENST00000465278	COLEC11	Q9BWP8	271 aa		5.8	□□□□□ -1.48
CACNA1C-223	ENST00000465278	CYP4F11	Q9HBI6	524 aa		5.8	□□□□□ -1.48
CACNA1C-223	ENST00000465278	ARFGAP3	Q9NP61	516 aa		5.8	□□□□□ -1.48
CACNA1C-223	ENST00000465278	ALG13	Q9NP73	1137 aa	Known RBP	5.8	□□□□□ -1.48
CACNA1C-223	ENST00000465278	DKK3	Q9UBP4	350 aa		5.8	□□□□□ -1.48
CACNA1C-223	ENST00000465278	NCAPD2	Q15021	1401 aa		5.8	□□□□□ -1.48
CACNA1C-223	ENST00000465278	SALL3	Q9BXA9	1300 aa		5.79	□□□□□ -1.48
CACNA1C-223	ENST00000465278	BRWD1	Q9NSI6	2320 aa		5.79	□□□□□ -1.48
CACNA1C-223	ENST00000465278	SCN9A	Q15858	1988 aa		5.79	□□□□□ -1.48
CACNA1C-223	ENST00000465278		A0A087WZ62	844 aa		5.79	□□□□□ -1.48
CACNA1C-223	ENST00000465278	ABHD14A-ACY1	A0A1B0GW23	586 aa		5.79	□□□□□ -1.48
CACNA1C-223	ENST00000465278		F5H423	210 aa	Predicted RBP	5.79	□□□□□ -1.48
CACNA1C-223	ENST00000465278	PEX1	O43933	1283 aa		5.79	□□□□□ -1.48
CACNA1C-223	ENST00000465278	SRGAP2	O75044	1071 aa		5.79	□□□□□ -1.48
CACNA1C-223	ENST00000465278	VNN1	O95497	513 aa		5.79	□□□□□ -1.48
CACNA1C-223	ENST00000465278	HGF	P14210	728 aa		5.79	□□□□□ -1.48
CACNA1C-223	ENST00000465278	EEF1G	P26641	437 aa	Known RBP	5.79	□□□□□ -1.48
CACNA1C-223	ENST00000465278	BTK	Q06187	659 aa		5.79	□□□□□ -1.48
CACNA1C-223	ENST00000465278	MPEG1	Q2M385	716 aa		5.79	□□□□□ -1.48
CACNA1C-223	ENST00000465278	CATSPERG	Q6ZRH7	1159 aa		5.79	□□□□□ -1.48
CACNA1C-223	ENST00000465278	ZNF627	Q7L945	461 aa		5.79	□□□□□ -1.48
CACNA1C-223	ENST00000465278	NEU4	Q8WWR8	484 aa	Predicted RBP	5.79	□□□□□ -1.48
CACNA1C-223	ENST00000465278	ATRIP	Q8WXE1	791 aa		5.79	□□□□□ -1.48
CACNA1C-223	ENST00000465278	ATG4A	Q8WYN0	398 aa		5.79	□□□□□ -1.48
CACNA1C-223	ENST00000465278	DEFB118	Q96PH6	123 aa		5.79	□□□□□ -1.48
CACNA1C-223	ENST00000465278	TESK2	Q96S53	571 aa		5.79	□□□□□ -1.48
CACNA1C-223	ENST00000465278	C11orf49	Q9H6J7	331 aa		5.79	□□□□□ -1.48
CACNA1C-223	ENST00000465278	KCTD5	Q9NXV2	234 aa		5.79	□□□□□ -1.48
CACNA1C-223	ENST00000465278	SMG1	Q96Q15	3661 aa	Known RBP	5.79	□□□□□ -1.48
CACNA1C-223	ENST00000465278	ECM29	Q5VYK3	1845 aa		5.78	□□□□□ -1.48
CACNA1C-223	ENST00000465278	CEP250	Q9BV73	2442 aa		5.78	□□□□□ -1.48
CACNA1C-223	ENST00000465278	PFAS	O15067	1338 aa		5.78	□□□□□ -1.48
CACNA1C-223	ENST00000465278	RLF	Q13129	1914 aa		5.78	□□□□□ -1.48
CACNA1C-223	ENST00000465278	PRRC2B	Q5JSZ5	2229 aa	Known RBP	5.78	□□□□□ -1.48
CACNA1C-223	ENST00000465278	SPTBN2	O15020	2390 aa		5.78	□□□□□ -1.48
CACNA1C-223	ENST00000465278	LOC400499	M0QZD8	3231 aa		5.78	□□□□□ -1.48
CACNA1C-223	ENST00000465278	CCP110	O43303	1012 aa		5.78	□□□□□ -1.48
CACNA1C-223	ENST00000465278	PPIP5K2	O43314	1243 aa		5.78	□□□□□ -1.48
CACNA1C-223	ENST00000465278	DCX	O43602	365 aa		5.78	□□□□□ -1.48
CACNA1C-223	ENST00000465278	TNFRSF1A	P19438	455 aa		5.78	□□□□□ -1.48
CACNA1C-223	ENST00000465278	PPIF	P30405	207 aa	Known RBP	5.78	□□□□□ -1.48
CACNA1C-223	ENST00000465278	PRKAR1B	P31321	381 aa		5.78	□□□□□ -1.48
CACNA1C-223	ENST00000465278	ATIC	P31939	592 aa		5.78	□□□□□ -1.48
CACNA1C-223	ENST00000465278	IL6ST	P40189	918 aa	Predicted RBP	5.78	□□□□□ -1.48
CACNA1C-223	ENST00000465278	CALD1	Q05682	793 aa	Known RBP	5.78	□□□□□ -1.48
CACNA1C-223	ENST00000465278	PTPN13	Q12923	2485 aa		5.78	□□□□□ -1.48
CACNA1C-223	ENST00000465278	TNIP1	Q15025	636 aa		5.78	□□□□□ -1.48
CACNA1C-223	ENST00000465278	DGKK	Q5KSL6	1271 aa		5.78	□□□□□ -1.48
CACNA1C-223	ENST00000465278	TBC1D9B	Q66K14	1250 aa		5.78	□□□□□ -1.48
CACNA1C-223	ENST00000465278	CRIP3	Q6Q6R5	217 aa		5.78	□□□□□ -1.48
CACNA1C-223	ENST00000465278	CRTC1	Q6UUV9	634 aa		5.78	□□□□□ -1.48
CACNA1C-223	ENST00000465278	DOCK3	Q8IZD9	2030 aa		5.78	□□□□□ -1.48
CACNA1C-223	ENST00000465278	ABRA	Q8N0Z2	381 aa		5.78	□□□□□ -1.48
CACNA1C-223	ENST00000465278		Q8N1X5	172 aa		5.78	□□□□□ -1.48
CACNA1C-223	ENST00000465278	GLIS1	Q8NBF1	620 aa		5.78	□□□□□ -1.48
CACNA1C-223	ENST00000465278	RAET1E	Q8TD07	263 aa		5.78	□□□□□ -1.48
CACNA1C-223	ENST00000465278	SMCR8	Q8TEV9	937 aa	Predicted RBP	5.78	□□□□□ -1.48
CACNA1C-223	ENST00000465278	GLG1	Q92896	1179 aa		5.78	□□□□□ -1.48
CACNA1C-223	ENST00000465278	C18orf8	Q96DM3	657 aa		5.78	□□□□□ -1.48
CACNA1C-223	ENST00000465278	PGBD1	Q96JS3	809 aa		5.78	□□□□□ -1.48
CACNA1C-223	ENST00000465278	C17orf80	Q9BSJ5	609 aa		5.78	□□□□□ -1.48
CACNA1C-223	ENST00000465278	MAGEB5	Q9BZ81	275 aa		5.78	□□□□□ -1.48
CACNA1C-223	ENST00000465278	TRIM5	Q9C035	493 aa		5.78	□□□□□ -1.48
CACNA1C-223	ENST00000465278	DHX36	Q9H2U1	1008 aa	Known RBP	5.78	□□□□□ -1.48
CACNA1C-223	ENST00000465278	TRMT13	Q9NUP7	481 aa	Known RBP	5.78	□□□□□ -1.48
CACNA1C-223	ENST00000465278	LRCH1	Q9Y2L9	728 aa		5.78	□□□□□ -1.48
CACNA1C-223	ENST00000465278	SNX14	Q9Y5W7	946 aa		5.78	□□□□□ -1.48
CACNA1C-223	ENST00000465278	EPN1	Q9Y6I3	576 aa	Predicted RBP	5.78	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms