RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 IRAK2O43187 625 aa16.03■□□□□ 0.16
SKA3-204ENST00000462482 GJB3O75712 270 aa16.03■□□□□ 0.16
SKA3-204ENST00000462482 FTH1P19P0C7X4 201 aa16.03■□□□□ 0.16
SKA3-204ENST00000462482 PABPC1P11940 636 aaKnown RBP16.03■□□□□ 0.16
SKA3-204ENST00000462482 POLR2EP19388 210 aaKnown RBP16.03■□□□□ 0.16
SKA3-204ENST00000462482 HLA-FP30511 346 aa16.03■□□□□ 0.16
SKA3-204ENST00000462482 PPP1R2P41236 205 aa16.03■□□□□ 0.16
SKA3-204ENST00000462482 AFF3P51826 1226 aaKnown RBP16.03■□□□□ 0.16
SKA3-204ENST00000462482 DAOAP59103 153 aa16.03■□□□□ 0.16
SKA3-204ENST00000462482 ST8SIA6P61647 398 aa16.03■□□□□ 0.16
SKA3-204ENST00000462482 ZBTB16Q05516 673 aa16.03■□□□□ 0.16
SKA3-204ENST00000462482 SFSWAPQ12872 951 aaKnown RBP16.03■□□□□ 0.16
SKA3-204ENST00000462482 CAMK2GQ13555 558 aaPredicted RBP16.03■□□□□ 0.16
SKA3-204ENST00000462482 SUZ12Q15022 739 aaKnown RBP16.03■□□□□ 0.16
SKA3-204ENST00000462482 TTC31Q49AM3 519 aaPredicted RBP16.03■□□□□ 0.16
SKA3-204ENST00000462482 TMEM215Q68D42 235 aa16.03■□□□□ 0.16
SKA3-204ENST00000462482 LCLAT1Q6UWP7 414 aa16.03■□□□□ 0.16
SKA3-204ENST00000462482 RAB44Q7Z6P3 723 aaPredicted RBP16.03■□□□□ 0.16
SKA3-204ENST00000462482 SLC35C1Q96A29 364 aa16.03■□□□□ 0.16
SKA3-204ENST00000462482 CAMK1GQ96NX5 476 aa16.03■□□□□ 0.16
SKA3-204ENST00000462482 BTBD1Q9H0C5 482 aa16.03■□□□□ 0.16
SKA3-204ENST00000462482 SUN2Q9UH99 717 aa16.03■□□□□ 0.16
SKA3-204ENST00000462482 STOML2Q9UJZ1 356 aa16.03■□□□□ 0.16
SKA3-204ENST00000462482 SRRM3A6NNA2 597 aaPredicted RBP16.02■□□□□ 0.16
SKA3-204ENST00000462482 M0QYV0 167 aa16.02■□□□□ 0.16
SKA3-204ENST00000462482 MSI1O43347 362 aaKnown RBP16.02■□□□□ 0.16
SKA3-204ENST00000462482 FBXO21O94952 628 aa16.02■□□□□ 0.16
SKA3-204ENST00000462482 DLDP09622 509 aaKnown RBP16.02■□□□□ 0.16
SKA3-204ENST00000462482 ZNF883P0CG24 379 aa16.02■□□□□ 0.16
SKA3-204ENST00000462482 FMO5P49326 533 aa16.02■□□□□ 0.16
SKA3-204ENST00000462482 RGS7P49802 495 aa16.02■□□□□ 0.16
SKA3-204ENST00000462482 MPP7Q5T2T1 576 aa16.02■□□□□ 0.16
SKA3-204ENST00000462482 MBLAC2Q68D91 279 aa16.02■□□□□ 0.16
SKA3-204ENST00000462482 BHLHA9Q7RTU4 235 aa16.02■□□□□ 0.16
SKA3-204ENST00000462482 ZC3H3Q8IXZ2 948 aaKnown RBP16.02■□□□□ 0.16
SKA3-204ENST00000462482 FMR1NBQ8N0W7 255 aaPredicted RBP16.02■□□□□ 0.16
SKA3-204ENST00000462482 PPM1KQ8N3J5 372 aa16.02■□□□□ 0.16
SKA3-204ENST00000462482 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.02■□□□□ 0.16
SKA3-204ENST00000462482 GANCQ8TET4 914 aa16.02■□□□□ 0.16
SKA3-204ENST00000462482 CYB5D2Q8WUJ1 264 aa16.02■□□□□ 0.16
SKA3-204ENST00000462482 ADAMTS14Q8WXS8 1223 aa16.02■□□□□ 0.16
SKA3-204ENST00000462482 TM7SF3Q9NS93 570 aa16.02■□□□□ 0.16
SKA3-204ENST00000462482 NCKAP1Q9Y2A7 1128 aa16.02■□□□□ 0.16
SKA3-204ENST00000462482 NUP205Q92621 2012 aa16.02■□□□□ 0.15
SKA3-204ENST00000462482 FAM221BA6H8Z2 402 aa16.01■□□□□ 0.15
SKA3-204ENST00000462482 SART1O43290 800 aaKnown RBP16.01■□□□□ 0.15
SKA3-204ENST00000462482 TBL1XO60907 577 aa16.01■□□□□ 0.15
SKA3-204ENST00000462482 RNASEH1O60930 286 aaKnown RBP16.01■□□□□ 0.15
SKA3-204ENST00000462482 LTFP02788 710 aa16.01■□□□□ 0.15
SKA3-204ENST00000462482 TBX4P57082 545 aa16.01■□□□□ 0.15
SKA3-204ENST00000462482 CNGA2Q16280 664 aa16.01■□□□□ 0.15
SKA3-204ENST00000462482 HLA-BQ31612 363 aa16.01■□□□□ 0.15
SKA3-204ENST00000462482 MSANTD2Q6P1R3 559 aa16.01■□□□□ 0.15
SKA3-204ENST00000462482 MFN1Q8IWA4 741 aa16.01■□□□□ 0.15
SKA3-204ENST00000462482 RBBP8NLQ8NC74 664 aaPredicted RBP16.01■□□□□ 0.15
SKA3-204ENST00000462482 HJURPQ8NCD3 748 aaPredicted RBP16.01■□□□□ 0.15
SKA3-204ENST00000462482 ENGASEQ8NFI3 743 aa16.01■□□□□ 0.15
SKA3-204ENST00000462482 DHTKD1Q96HY7 919 aaPredicted RBP16.01■□□□□ 0.15
SKA3-204ENST00000462482 HSFY1Q96LI6 401 aa16.01■□□□□ 0.15
SKA3-204ENST00000462482 CEP63Q96MT8 703 aa16.01■□□□□ 0.15
SKA3-204ENST00000462482 CDC6Q99741 560 aa16.01■□□□□ 0.15
SKA3-204ENST00000462482 TMEM245Q9H330 911 aa16.01■□□□□ 0.15
SKA3-204ENST00000462482 STIM2Q9P246 746 aa16.01■□□□□ 0.15
SKA3-204ENST00000462482 MYOFQ9NZM1 2061 aa16■□□□□ 0.15
SKA3-204ENST00000462482 A0A1B0GVT2 93 aa16■□□□□ 0.15
SKA3-204ENST00000462482 TRIM49BA6NDI0 452 aa16■□□□□ 0.15
SKA3-204ENST00000462482 FLRT2O43155 660 aa16■□□□□ 0.15
SKA3-204ENST00000462482 ACSL4O60488 711 aa16■□□□□ 0.15
SKA3-204ENST00000462482 SEMA4FO95754 770 aa16■□□□□ 0.15
SKA3-204ENST00000462482 PMS1P54277 932 aaKnown RBP16■□□□□ 0.15
SKA3-204ENST00000462482 RING1Q06587 406 aa16■□□□□ 0.15
SKA3-204ENST00000462482 PIK3R6Q5UE93 754 aa16■□□□□ 0.15
SKA3-204ENST00000462482 ZNF776Q68DI1 518 aaPredicted RBP16■□□□□ 0.15
SKA3-204ENST00000462482 ADAT2Q7Z6V5 191 aaKnown RBP16■□□□□ 0.15
SKA3-204ENST00000462482 ADIPOR2Q86V24 386 aa16■□□□□ 0.15
SKA3-204ENST00000462482 ZNF366Q8N895 744 aa16■□□□□ 0.15
SKA3-204ENST00000462482 RHBDD1Q8TEB9 315 aa16■□□□□ 0.15
SKA3-204ENST00000462482 SLC35F5Q8WV83 523 aa16■□□□□ 0.15
SKA3-204ENST00000462482 AZIN2Q96A70 460 aa16■□□□□ 0.15
SKA3-204ENST00000462482 TRIM62Q9BVG3 475 aa16■□□□□ 0.15
SKA3-204ENST00000462482 C6orf106Q9H6K1 298 aaPredicted RBP16■□□□□ 0.15
SKA3-204ENST00000462482 SGK2Q9HBY8 427 aa16■□□□□ 0.15
SKA3-204ENST00000462482 RALYQ9UKM9 306 aaKnown RBP16■□□□□ 0.15
SKA3-204ENST00000462482 PCOLCE2Q9UKZ9 415 aa16■□□□□ 0.15
SKA3-204ENST00000462482 WDR3Q9UNX4 943 aaKnown RBP eCLIP16■□□□□ 0.15
SKA3-204ENST00000462482 PCDHGB2Q9Y5G2 931 aa16■□□□□ 0.15
SKA3-204ENST00000462482 PLXND1Q9Y4D7 1925 aa16■□□□□ 0.15
SKA3-204ENST00000462482 PIK3R2O00459 728 aa15.99■□□□□ 0.15
SKA3-204ENST00000462482 PMM2O15305 246 aa15.99■□□□□ 0.15
SKA3-204ENST00000462482 P4HA2O15460 535 aa15.99■□□□□ 0.15
SKA3-204ENST00000462482 FSBPO95073 299 aa15.99■□□□□ 0.15
SKA3-204ENST00000462482 MOCS3O95396 460 aa15.99■□□□□ 0.15
SKA3-204ENST00000462482 ASLP04424 464 aa15.99■□□□□ 0.15
SKA3-204ENST00000462482 ACSL1P33121 698 aa15.99■□□□□ 0.15
SKA3-204ENST00000462482 CSNK1EP49674 416 aaKnown RBP15.99■□□□□ 0.15
SKA3-204ENST00000462482 RPS14P62263 151 aaKnown RBP15.99■□□□□ 0.15
SKA3-204ENST00000462482 NUCB2P80303 420 aa15.99■□□□□ 0.15
SKA3-204ENST00000462482 CDH18Q13634 790 aa15.99■□□□□ 0.15
SKA3-204ENST00000462482 PKDCCQ504Y2 493 aa15.99■□□□□ 0.15
SKA3-204ENST00000462482 PMF1Q6P1K2 205 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms