RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 TRIM71Q2Q1W2 868 aaKnown RBP5.54□□□□□ -1.52
COPS3-204ENST00000462236 MAP9Q49MG5 647 aa5.54□□□□□ -1.52
COPS3-204ENST00000462236 COBLL1Q53SF7 1204 aa5.54□□□□□ -1.52
COPS3-204ENST00000462236 KHDC1LQ5JSQ8 128 aa5.54□□□□□ -1.52
COPS3-204ENST00000462236 SLC9C2Q5TAH2 1124 aa5.54□□□□□ -1.52
COPS3-204ENST00000462236 CTR9Q6PD62 1173 aa5.54□□□□□ -1.52
COPS3-204ENST00000462236 PPP1R3BQ86XI6 285 aa5.54□□□□□ -1.52
COPS3-204ENST00000462236 FBXO16Q8IX29 292 aaPredicted RBP5.54□□□□□ -1.52
COPS3-204ENST00000462236 RHOT2Q8IXI1 618 aa5.54□□□□□ -1.52
COPS3-204ENST00000462236 RPAP2Q8IXW5 612 aaPredicted RBP5.54□□□□□ -1.52
COPS3-204ENST00000462236 CPXCR1Q8N123 301 aa5.54□□□□□ -1.52
COPS3-204ENST00000462236 AFAP1L1Q8TED9 768 aa5.54□□□□□ -1.52
COPS3-204ENST00000462236 DVL3Q92997 716 aaPredicted RBP5.54□□□□□ -1.52
COPS3-204ENST00000462236 ADOQ96SZ5 270 aa5.54□□□□□ -1.52
COPS3-204ENST00000462236 C17orf80Q9BSJ5 609 aa5.54□□□□□ -1.52
COPS3-204ENST00000462236 MTG1Q9BT17 334 aaPredicted RBP5.54□□□□□ -1.52
COPS3-204ENST00000462236 C22orf23Q9BZE7 217 aa5.54□□□□□ -1.52
COPS3-204ENST00000462236 UPF3BQ9BZI7 483 aaKnown RBP5.54□□□□□ -1.52
COPS3-204ENST00000462236 KLC2Q9H0B6 622 aa5.54□□□□□ -1.52
COPS3-204ENST00000462236 GSTO2Q9H4Y5 243 aa5.54□□□□□ -1.52
COPS3-204ENST00000462236 ZNF703Q9H7S9 590 aaPredicted RBP5.54□□□□□ -1.52
COPS3-204ENST00000462236 ACAD9Q9H845 621 aa5.54□□□□□ -1.52
COPS3-204ENST00000462236 RSAD1Q9HA92 442 aa5.54□□□□□ -1.52
COPS3-204ENST00000462236 FBXO34Q9NWN3 711 aa5.54□□□□□ -1.52
COPS3-204ENST00000462236 SMPD4Q9NXE4 827 aa5.54□□□□□ -1.52
COPS3-204ENST00000462236 CYP39A1Q9NYL5 469 aa5.54□□□□□ -1.52
COPS3-204ENST00000462236 MUTYHQ9UIF7 546 aa5.54□□□□□ -1.52
COPS3-204ENST00000462236 FEM1BQ9UK73 627 aa5.54□□□□□ -1.52
COPS3-204ENST00000462236 TPCN1Q9ULQ1 816 aa5.54□□□□□ -1.52
COPS3-204ENST00000462236 TNNQ9UQP3 1299 aa5.54□□□□□ -1.52
COPS3-204ENST00000462236 MED16Q9Y2X0 877 aa5.54□□□□□ -1.52
COPS3-204ENST00000462236 PCDHA1Q9Y5I3 950 aa5.54□□□□□ -1.52
COPS3-204ENST00000462236 MYH9P35579 1960 aaKnown RBP5.53□□□□□ -1.52
COPS3-204ENST00000462236 MTCL1Q9Y4B5 1905 aaKnown RBP5.53□□□□□ -1.52
COPS3-204ENST00000462236 CFAP69A5D8W1 941 aa5.53□□□□□ -1.52
COPS3-204ENST00000462236 TMEM221A6NGB7 291 aa5.53□□□□□ -1.52
COPS3-204ENST00000462236 M0R296 226 aa5.53□□□□□ -1.52
COPS3-204ENST00000462236 MYO1FO00160 1098 aa5.53□□□□□ -1.52
COPS3-204ENST00000462236 FOXD2O60548 495 aaPredicted RBP5.53□□□□□ -1.52
COPS3-204ENST00000462236 SBK3P0C264 359 aa5.53□□□□□ -1.52
COPS3-204ENST00000462236 SPATA31D3P0C874 917 aa5.53□□□□□ -1.52
COPS3-204ENST00000462236 MYBP10242 640 aa5.53□□□□□ -1.52
COPS3-204ENST00000462236 MYF5P13349 255 aa5.53□□□□□ -1.52
COPS3-204ENST00000462236 HK1P19367 917 aa5.53□□□□□ -1.52
COPS3-204ENST00000462236 SLC6A4P31645 630 aa5.53□□□□□ -1.52
COPS3-204ENST00000462236 ADD2P35612 726 aa5.53□□□□□ -1.52
COPS3-204ENST00000462236 HABP2Q14520 560 aaPredicted RBP5.53□□□□□ -1.52
COPS3-204ENST00000462236 EPC2Q52LR7 807 aa5.53□□□□□ -1.52
COPS3-204ENST00000462236 SBK1Q52WX2 424 aa5.53□□□□□ -1.52
COPS3-204ENST00000462236 TCEAL5Q5H9L2 206 aa5.53□□□□□ -1.52
COPS3-204ENST00000462236 FAM102AQ5T9C2 384 aaPredicted RBP5.53□□□□□ -1.52
COPS3-204ENST00000462236 AGAP9Q5VTM2 703 aa5.53□□□□□ -1.52
COPS3-204ENST00000462236 APOA5Q6Q788 366 aa5.53□□□□□ -1.52
COPS3-204ENST00000462236 SPATA31D4Q6ZUB0 917 aa5.53□□□□□ -1.52
COPS3-204ENST00000462236 TMPRSS6Q8IU80 811 aa5.53□□□□□ -1.52
COPS3-204ENST00000462236 SH2D3CQ8N5H7 860 aa5.53□□□□□ -1.52
COPS3-204ENST00000462236 RNF169Q8NCN4 708 aa5.53□□□□□ -1.52
COPS3-204ENST00000462236 GMCL1P1Q8NEA9 526 aa5.53□□□□□ -1.52
COPS3-204ENST00000462236 IL31RAQ8NI17 732 aa5.53□□□□□ -1.52
COPS3-204ENST00000462236 KAT2BQ92831 832 aa5.53□□□□□ -1.52
COPS3-204ENST00000462236 APIPQ96GX9 242 aa5.53□□□□□ -1.52
COPS3-204ENST00000462236 ZC3H10Q96K80 434 aaKnown RBP5.53□□□□□ -1.52
COPS3-204ENST00000462236 MRGPRX1Q96LB2 322 aa5.53□□□□□ -1.52
COPS3-204ENST00000462236 MED15Q96RN5 788 aa5.53□□□□□ -1.52
COPS3-204ENST00000462236 C1orf43Q9BWL3 253 aa5.53□□□□□ -1.52
COPS3-204ENST00000462236 FTOQ9C0B1 505 aaKnown RBP eCLIP5.53□□□□□ -1.52
COPS3-204ENST00000462236 BHMT2Q9H2M3 363 aa5.53□□□□□ -1.52
COPS3-204ENST00000462236 ARMT1Q9H993 441 aa5.53□□□□□ -1.52
COPS3-204ENST00000462236 ZMAT3Q9HA38 289 aaKnown RBP5.53□□□□□ -1.52
COPS3-204ENST00000462236 ATP6V0A4Q9HBG4 840 aa5.53□□□□□ -1.52
COPS3-204ENST00000462236 RNF146Q9NTX7 359 aa5.53□□□□□ -1.52
COPS3-204ENST00000462236 CTNNA3Q9UI47 895 aa5.53□□□□□ -1.52
COPS3-204ENST00000462236 FAM50BQ9Y247 325 aa5.53□□□□□ -1.52
COPS3-204ENST00000462236 INSL6Q9Y581 213 aa5.53□□□□□ -1.52
COPS3-204ENST00000462236 F5P12259 2224 aa5.52□□□□□ -1.53
COPS3-204ENST00000462236 MIA3Q5JRA6 1907 aa5.52□□□□□ -1.53
COPS3-204ENST00000462236 GAGE12BA1L429 117 aa5.52□□□□□ -1.53
COPS3-204ENST00000462236 GAGE12HA6NDE8 117 aa5.52□□□□□ -1.53
COPS3-204ENST00000462236 PRSS29PA6NIE9 313 aa5.52□□□□□ -1.53
COPS3-204ENST00000462236 LOC730098B7Z3J9 87 aa5.52□□□□□ -1.53
COPS3-204ENST00000462236 C5orf67F2Z3F1 127 aa5.52□□□□□ -1.53
COPS3-204ENST00000462236 MUSKO15146 869 aa5.52□□□□□ -1.53
COPS3-204ENST00000462236 NCK2O43639 380 aa5.52□□□□□ -1.53
COPS3-204ENST00000462236 TBX10O75333 385 aa5.52□□□□□ -1.53
COPS3-204ENST00000462236 PPFIA4O75335 1185 aa5.52□□□□□ -1.53
COPS3-204ENST00000462236 SURF6O75683 361 aaKnown RBP5.52□□□□□ -1.53
COPS3-204ENST00000462236 BCAR3O75815 825 aa5.52□□□□□ -1.53
COPS3-204ENST00000462236 MBD4O95243 580 aa5.52□□□□□ -1.53
COPS3-204ENST00000462236 PEX2P28328 305 aa5.52□□□□□ -1.53
COPS3-204ENST00000462236 CPT1AP50416 773 aa5.52□□□□□ -1.53
COPS3-204ENST00000462236 SCNN1GP51170 649 aa5.52□□□□□ -1.53
COPS3-204ENST00000462236 CHN2P52757 468 aa5.52□□□□□ -1.53
COPS3-204ENST00000462236 ARFIP2P53365 341 aa5.52□□□□□ -1.53
COPS3-204ENST00000462236 VCPP55072 806 aaKnown RBP5.52□□□□□ -1.53
COPS3-204ENST00000462236 POU6F2P78424 691 aaPredicted RBP5.52□□□□□ -1.53
COPS3-204ENST00000462236 ZXDAP98168 799 aa5.52□□□□□ -1.53
COPS3-204ENST00000462236 EFEMP1Q12805 493 aa5.52□□□□□ -1.53
COPS3-204ENST00000462236 SPATS1Q496A3 300 aa5.52□□□□□ -1.53
COPS3-204ENST00000462236 UTP14CQ5TAP6 766 aaKnown RBP5.52□□□□□ -1.53
COPS3-204ENST00000462236 METRNLQ641Q3 311 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms