RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 NLRC4Q9NPP4 1024 aa5.36□□□□□ -1.55
SF3A3-202ENST00000460925 XPNPEP3Q9NQH7 507 aa5.36□□□□□ -1.55
SF3A3-202ENST00000460925 TBC1D22BQ9NU19 505 aa5.36□□□□□ -1.55
SF3A3-202ENST00000460925 BLOC1S4Q9NUP1 217 aa5.36□□□□□ -1.55
SF3A3-202ENST00000460925 DDX19AQ9NUU7 478 aaKnown RBP5.36□□□□□ -1.55
SF3A3-202ENST00000460925 HPSEQ9Y251 543 aa5.36□□□□□ -1.55
SF3A3-202ENST00000460925 POLHQ9Y253 713 aa5.36□□□□□ -1.55
SF3A3-202ENST00000460925 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.36□□□□□ -1.55
SF3A3-202ENST00000460925 OAS3Q9Y6K5 1087 aaKnown RBP5.36□□□□□ -1.55
SF3A3-202ENST00000460925 IGSF9BQ9UPX0 1349 aa5.36□□□□□ -1.55
SF3A3-202ENST00000460925 SCN5AQ14524 2016 aa5.36□□□□□ -1.55
SF3A3-202ENST00000460925 GOLGA6L4A6NEF3 574 aa5.35□□□□□ -1.55
SF3A3-202ENST00000460925 TMEM110-MUSTN1A8MSY1 372 aa5.35□□□□□ -1.55
SF3A3-202ENST00000460925 RSPH10B2B2RC85 870 aa5.35□□□□□ -1.55
SF3A3-202ENST00000460925 USO1O60763 962 aaKnown RBP5.35□□□□□ -1.55
SF3A3-202ENST00000460925 DUSP11O75319 330 aaKnown RBP5.35□□□□□ -1.55
SF3A3-202ENST00000460925 SLITRK3O94933 977 aa5.35□□□□□ -1.55
SF3A3-202ENST00000460925 CCDC175P0C221 793 aa5.35□□□□□ -1.55
SF3A3-202ENST00000460925 RSPH10BP0C881 870 aa5.35□□□□□ -1.55
SF3A3-202ENST00000460925 SERPINB3P29508 390 aa5.35□□□□□ -1.55
SF3A3-202ENST00000460925 UBA7P41226 1012 aa5.35□□□□□ -1.55
SF3A3-202ENST00000460925 STAT6P42226 847 aa5.35□□□□□ -1.55
SF3A3-202ENST00000460925 JAK3P52333 1124 aa5.35□□□□□ -1.55
SF3A3-202ENST00000460925 GTF2A1P52655 376 aaPredicted RBP5.35□□□□□ -1.55
SF3A3-202ENST00000460925 NCKAP1LP55160 1127 aa5.35□□□□□ -1.55
SF3A3-202ENST00000460925 PRMT2P55345 433 aa5.35□□□□□ -1.55
SF3A3-202ENST00000460925 SESN2P58004 480 aaPredicted RBP5.35□□□□□ -1.55
SF3A3-202ENST00000460925 UBE2HP62256 183 aa5.35□□□□□ -1.55
SF3A3-202ENST00000460925 TOP3AQ13472 1001 aaPredicted RBP5.35□□□□□ -1.55
SF3A3-202ENST00000460925 KRT72Q14CN4 511 aa5.35□□□□□ -1.55
SF3A3-202ENST00000460925 ARHGEF6Q15052 776 aa5.35□□□□□ -1.55
SF3A3-202ENST00000460925 PLCB4Q15147 1175 aa5.35□□□□□ -1.55
SF3A3-202ENST00000460925 NOMO1Q15155 1222 aa5.35□□□□□ -1.55
SF3A3-202ENST00000460925 CNN3Q15417 329 aaKnown RBP5.35□□□□□ -1.55
SF3A3-202ENST00000460925 KCNA10Q16322 511 aa5.35□□□□□ -1.55
SF3A3-202ENST00000460925 CAMK4Q16566 473 aa5.35□□□□□ -1.55
SF3A3-202ENST00000460925 PHF19Q5T6S3 580 aa5.35□□□□□ -1.55
SF3A3-202ENST00000460925 KRT79Q5XKE5 535 aa5.35□□□□□ -1.55
SF3A3-202ENST00000460925 TRIM68Q6AZZ1 485 aa5.35□□□□□ -1.55
SF3A3-202ENST00000460925 ADALQ6DHV7 355 aa5.35□□□□□ -1.55
SF3A3-202ENST00000460925 CXCL17Q6UXB2 119 aa5.35□□□□□ -1.55
SF3A3-202ENST00000460925 MAEAQ7L5Y9 396 aa5.35□□□□□ -1.55
SF3A3-202ENST00000460925 OTOP2Q7RTS6 562 aa5.35□□□□□ -1.55
SF3A3-202ENST00000460925 DAAM2Q86T65 1068 aa5.35□□□□□ -1.55
SF3A3-202ENST00000460925 TRIM74Q86UV6 250 aa5.35□□□□□ -1.55
SF3A3-202ENST00000460925 TRIM73Q86UV7 250 aa5.35□□□□□ -1.55
SF3A3-202ENST00000460925 FAM186BQ8IYM0 893 aa5.35□□□□□ -1.55
SF3A3-202ENST00000460925 NDUFAF2Q8N183 169 aa5.35□□□□□ -1.55
SF3A3-202ENST00000460925 C17orf50Q8WW18 174 aa5.35□□□□□ -1.55
SF3A3-202ENST00000460925 SEPT1Q8WYJ6 367 aa5.35□□□□□ -1.55
SF3A3-202ENST00000460925 KAT2BQ92831 832 aa5.35□□□□□ -1.55
SF3A3-202ENST00000460925 GLG1Q92896 1179 aa5.35□□□□□ -1.55
SF3A3-202ENST00000460925 KAT5Q92993 513 aa5.35□□□□□ -1.55
SF3A3-202ENST00000460925 CYFIP2Q96F07 1278 aa5.35□□□□□ -1.55
SF3A3-202ENST00000460925 ZNF668Q96K58 619 aaPredicted RBP5.35□□□□□ -1.55
SF3A3-202ENST00000460925 TNIP3Q96KP6 325 aa5.35□□□□□ -1.55
SF3A3-202ENST00000460925 MRGPRX4Q96LA9 322 aa5.35□□□□□ -1.55
SF3A3-202ENST00000460925 SAMD11Q96NU1 681 aa5.35□□□□□ -1.55
SF3A3-202ENST00000460925 PPP1R16BQ96T49 567 aa5.35□□□□□ -1.55
SF3A3-202ENST00000460925 C16orf70Q9BSU1 422 aa5.35□□□□□ -1.55
SF3A3-202ENST00000460925 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.35□□□□□ -1.55
SF3A3-202ENST00000460925 UPF3AQ9H1J1 476 aaKnown RBP5.35□□□□□ -1.55
SF3A3-202ENST00000460925 NUP62CLQ9H1M0 184 aa5.35□□□□□ -1.55
SF3A3-202ENST00000460925 BLZF1Q9H2G9 400 aa5.35□□□□□ -1.55
SF3A3-202ENST00000460925 EPB41L4BQ9H329 900 aa5.35□□□□□ -1.55
SF3A3-202ENST00000460925 RNPEPQ9H4A4 650 aa5.35□□□□□ -1.55
SF3A3-202ENST00000460925 ZNF302Q9NR11 478 aa5.35□□□□□ -1.55
SF3A3-202ENST00000460925 DACT1Q9NYF0 836 aa5.35□□□□□ -1.55
SF3A3-202ENST00000460925 DNAI1Q9UI46 699 aa5.35□□□□□ -1.55
SF3A3-202ENST00000460925 BLOC1S6Q9UL45 172 aa5.35□□□□□ -1.55
SF3A3-202ENST00000460925 MAFFQ9ULX9 164 aa5.35□□□□□ -1.55
SF3A3-202ENST00000460925 SUFUQ9UMX1 484 aa5.35□□□□□ -1.55
SF3A3-202ENST00000460925 ITM2BQ9Y287 266 aa5.35□□□□□ -1.55
SF3A3-202ENST00000460925 PCDHA10Q9Y5I2 948 aa5.35□□□□□ -1.55
SF3A3-202ENST00000460925 N6AMT1Q9Y5N5 214 aa5.35□□□□□ -1.55
SF3A3-202ENST00000460925 MORC2Q9Y6X9 1032 aaPredicted RBP5.35□□□□□ -1.55
SF3A3-202ENST00000460925 EMSYQ7Z589 1322 aa5.34□□□□□ -1.55
SF3A3-202ENST00000460925 KDM3AQ9Y4C1 1321 aa5.34□□□□□ -1.55
SF3A3-202ENST00000460925 IGKV6D-21A0A0A0MT36 114 aa5.34□□□□□ -1.55
SF3A3-202ENST00000460925 DYTNA2CJ06 578 aa5.34□□□□□ -1.55
SF3A3-202ENST00000460925 CCP110O43303 1012 aa5.34□□□□□ -1.55
SF3A3-202ENST00000460925 AKR1B10O60218 316 aa5.34□□□□□ -1.55
SF3A3-202ENST00000460925 ZNF202O95125 648 aa5.34□□□□□ -1.55
SF3A3-202ENST00000460925 STBD1O95210 358 aa5.34□□□□□ -1.55
SF3A3-202ENST00000460925 FTLP02792 175 aaPredicted RBP5.34□□□□□ -1.55
SF3A3-202ENST00000460925 ASGR1P07306 291 aa5.34□□□□□ -1.55
SF3A3-202ENST00000460925 GJB1P08034 283 aa5.34□□□□□ -1.55
SF3A3-202ENST00000460925 CCDC159P0C7I6 412 aa5.34□□□□□ -1.55
SF3A3-202ENST00000460925 JUNBP17275 347 aaPredicted RBP5.34□□□□□ -1.55
SF3A3-202ENST00000460925 CMA1P23946 247 aa5.34□□□□□ -1.55
SF3A3-202ENST00000460925 RPA1P27694 616 aa5.34□□□□□ -1.55
SF3A3-202ENST00000460925 PEX2P28328 305 aa5.34□□□□□ -1.55
SF3A3-202ENST00000460925 ECHS1P30084 290 aa5.34□□□□□ -1.55
SF3A3-202ENST00000460925 ETV4P43268 484 aa5.34□□□□□ -1.55
SF3A3-202ENST00000460925 SYKP43405 635 aa5.34□□□□□ -1.55
SF3A3-202ENST00000460925 QARSP47897 775 aaKnown RBP5.34□□□□□ -1.55
SF3A3-202ENST00000460925 SLC6A9P48067 706 aa5.34□□□□□ -1.55
SF3A3-202ENST00000460925 CLCN3P51790 818 aa5.34□□□□□ -1.55
SF3A3-202ENST00000460925 WNT3AP56704 352 aa5.34□□□□□ -1.55
SF3A3-202ENST00000460925 NKX6-1P78426 367 aaPredicted RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms