RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 DNAJC16Q9Y2G8 782 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 NID2Q14112 1375 aa10.01□□□□□ -0.81
UFD1-205ENST00000459854 MYL3P08590 195 aa10□□□□□ -0.81
UFD1-205ENST00000459854 HIST1H2AGP0C0S8 130 aaPredicted RBP10□□□□□ -0.81
UFD1-205ENST00000459854 ALOX12P18054 663 aa10□□□□□ -0.81
UFD1-205ENST00000459854 HIST1H2ADP20671 130 aa10□□□□□ -0.81
UFD1-205ENST00000459854 PSMB9P28065 219 aa10□□□□□ -0.81
UFD1-205ENST00000459854 ADSSP30520 456 aa10□□□□□ -0.81
UFD1-205ENST00000459854 GJA5P36382 358 aa10□□□□□ -0.81
UFD1-205ENST00000459854 EFNA5P52803 228 aa10□□□□□ -0.81
UFD1-205ENST00000459854 NFX1Q12986 1120 aaKnown RBP10□□□□□ -0.81
UFD1-205ENST00000459854 TBX2Q13207 712 aaPredicted RBP10□□□□□ -0.81
UFD1-205ENST00000459854 DUOXA2Q1HG44 320 aa10□□□□□ -0.81
UFD1-205ENST00000459854 CYP4Z2PQ8N1L4 340 aa10□□□□□ -0.81
UFD1-205ENST00000459854 SFRP1Q8N474 314 aa10□□□□□ -0.81
UFD1-205ENST00000459854 OR6B3Q8NGW1 331 aa10□□□□□ -0.81
UFD1-205ENST00000459854 AGR3Q8TD06 166 aa10□□□□□ -0.81
UFD1-205ENST00000459854 PARD3BQ8TEW8 1205 aa10□□□□□ -0.81
UFD1-205ENST00000459854 HIST1H2AHQ96KK5 128 aa10□□□□□ -0.81
UFD1-205ENST00000459854 PAFAH2Q99487 392 aa10□□□□□ -0.81
UFD1-205ENST00000459854 HIST1H2AJQ99878 128 aa10□□□□□ -0.81
UFD1-205ENST00000459854 H2AFJQ9BTM1 129 aa10□□□□□ -0.81
UFD1-205ENST00000459854 DCLK3Q9C098 648 aa10□□□□□ -0.81
UFD1-205ENST00000459854 UBE2OQ9C0C9 1292 aaKnown RBP10□□□□□ -0.81
UFD1-205ENST00000459854 CDKN2AIPQ9NXV6 580 aaPredicted RBP10□□□□□ -0.81
UFD1-205ENST00000459854 CROTQ9UKG9 612 aa10□□□□□ -0.81
UFD1-205ENST00000459854 LSM1O15116 133 aaKnown RBP10□□□□□ -0.81
UFD1-205ENST00000459854 RTN3O95197 1032 aaPredicted RBP10□□□□□ -0.81
UFD1-205ENST00000459854 TGFB3P10600 412 aa10□□□□□ -0.81
UFD1-205ENST00000459854 NPR3P17342 541 aa10□□□□□ -0.81
UFD1-205ENST00000459854 ALDH1A3P47895 512 aa10□□□□□ -0.81
UFD1-205ENST00000459854 QARSP47897 775 aaKnown RBP10□□□□□ -0.81
UFD1-205ENST00000459854 FLT3LGP49771 235 aa10□□□□□ -0.81
UFD1-205ENST00000459854 SESN2P58004 480 aaPredicted RBP10□□□□□ -0.81
UFD1-205ENST00000459854 NAA20P61599 178 aa10□□□□□ -0.81
UFD1-205ENST00000459854 BOLA3Q53S33 107 aa10□□□□□ -0.81
UFD1-205ENST00000459854 TCHHL1Q5QJ38 904 aaPredicted RBP10□□□□□ -0.81
UFD1-205ENST00000459854 GPAT2Q6NUI2 795 aa10□□□□□ -0.81
UFD1-205ENST00000459854 UGT3A1Q6NUS8 523 aa10□□□□□ -0.81
UFD1-205ENST00000459854 C11orf88Q6PI97 169 aa10□□□□□ -0.81
UFD1-205ENST00000459854 ABRAXAS1Q6UWZ7 409 aa10□□□□□ -0.81
UFD1-205ENST00000459854 SLC30A10Q6XR72 485 aa10□□□□□ -0.81
UFD1-205ENST00000459854 SCARA5Q6ZMJ2 495 aa10□□□□□ -0.81
UFD1-205ENST00000459854 FGD2Q7Z6J4 655 aa10□□□□□ -0.81
UFD1-205ENST00000459854 TRIM74Q86UV6 250 aa10□□□□□ -0.81
UFD1-205ENST00000459854 TRIM73Q86UV7 250 aa10□□□□□ -0.81
UFD1-205ENST00000459854 RAB42Q8N4Z0 105 aa10□□□□□ -0.81
UFD1-205ENST00000459854 ARRDC4Q8NCT1 418 aa10□□□□□ -0.81
UFD1-205ENST00000459854 SLAIN1Q8ND83 568 aa10□□□□□ -0.81
UFD1-205ENST00000459854 ASB2Q96Q27 587 aa10□□□□□ -0.81
UFD1-205ENST00000459854 HMX1Q9NP08 348 aaPredicted RBP10□□□□□ -0.81
UFD1-205ENST00000459854 CCNB1IP1Q9NPC3 277 aa10□□□□□ -0.81
UFD1-205ENST00000459854 RPRD1BQ9NQG5 326 aaKnown RBP10□□□□□ -0.81
UFD1-205ENST00000459854 NCKIPSDQ9NZQ3 722 aa10□□□□□ -0.81
UFD1-205ENST00000459854 TMCC3Q9ULS5 477 aa10□□□□□ -0.81
UFD1-205ENST00000459854 HPSEQ9Y251 543 aa10□□□□□ -0.81
UFD1-205ENST00000459854 BRCA1P38398 1863 aaKnown RBP10□□□□□ -0.81
UFD1-205ENST00000459854 FAM20BO75063 409 aa10□□□□□ -0.81
UFD1-205ENST00000459854 ARIH2O95376 493 aa10□□□□□ -0.81
UFD1-205ENST00000459854 HOXC6P09630 235 aa10□□□□□ -0.81
UFD1-205ENST00000459854 GRIK1P39086 918 aa10□□□□□ -0.81
UFD1-205ENST00000459854 ACADVLP49748 655 aa10□□□□□ -0.81
UFD1-205ENST00000459854 CPT1AP50416 773 aa10□□□□□ -0.81
UFD1-205ENST00000459854 OVGP1Q12889 678 aa10□□□□□ -0.81
UFD1-205ENST00000459854 THEM5Q8N1Q8 247 aa10□□□□□ -0.81
UFD1-205ENST00000459854 GALNT15Q8N3T1 639 aa10□□□□□ -0.81
UFD1-205ENST00000459854 SNX31Q8N9S9 440 aa10□□□□□ -0.81
UFD1-205ENST00000459854 OR7A2PQ8NGA2 310 aa10□□□□□ -0.81
UFD1-205ENST00000459854 WDR36Q8NI36 951 aaKnown RBP10□□□□□ -0.81
UFD1-205ENST00000459854 FEZF2Q8TBJ5 459 aa10□□□□□ -0.81
UFD1-205ENST00000459854 DCUN1D5Q9BTE7 237 aa10□□□□□ -0.81
UFD1-205ENST00000459854 KATNAL1Q9BW62 490 aa10□□□□□ -0.81
UFD1-205ENST00000459854 GRIP2Q9C0E4 1043 aa10□□□□□ -0.81
UFD1-205ENST00000459854 JPH1Q9HDC5 661 aaPredicted RBP10□□□□□ -0.81
UFD1-205ENST00000459854 ING3Q9NXR8 418 aa10□□□□□ -0.81
UFD1-205ENST00000459854 ZNF214Q9UL59 606 aaPredicted RBP10□□□□□ -0.81
UFD1-205ENST00000459854 NAALADL1Q9UQQ1 740 aa10□□□□□ -0.81
UFD1-205ENST00000459854 TMA7Q9Y2S6 64 aaKnown RBP10□□□□□ -0.81
UFD1-205ENST00000459854 CCDC182A6NF36 153 aa10□□□□□ -0.81
UFD1-205ENST00000459854 AKAP5P24588 427 aa10□□□□□ -0.81
UFD1-205ENST00000459854 HTRA3P83110 453 aa10□□□□□ -0.81
UFD1-205ENST00000459854 TYSND1Q2T9J0 566 aa10□□□□□ -0.81
UFD1-205ENST00000459854 ACAD10Q6JQN1 1059 aa10□□□□□ -0.81
UFD1-205ENST00000459854 ZNF544Q6NX49 715 aa10□□□□□ -0.81
UFD1-205ENST00000459854 PDXDC2PQ6P474 469 aa10□□□□□ -0.81
UFD1-205ENST00000459854 ELMSAN1Q6PJG2 1045 aa10□□□□□ -0.81
UFD1-205ENST00000459854 MRPL4Q9BYD3 311 aaKnown RBP10□□□□□ -0.81
UFD1-205ENST00000459854 ZNF446Q9NWS9 450 aa10□□□□□ -0.81
UFD1-205ENST00000459854 NMRK1Q9NWW6 199 aa10□□□□□ -0.81
UFD1-205ENST00000459854 PTTG2Q9NZH5 202 aa10□□□□□ -0.81
UFD1-205ENST00000459854 AKT3Q9Y243 479 aa10□□□□□ -0.81
UFD1-205ENST00000459854 DICER1Q9UPY3 1922 aaKnown RBP10□□□□□ -0.81
UFD1-205ENST00000459854 DYNC1LI2O43237 492 aaPredicted RBP9.99□□□□□ -0.81
UFD1-205ENST00000459854 PEX1O43933 1283 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 ABL1P00519 1130 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 AKR1A1P14550 325 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 PHKA2P46019 1235 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 DPYSQ14117 519 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 KYAT3Q6YP21 454 aaKnown RBP9.99□□□□□ -0.81
UFD1-205ENST00000459854 EXD1Q8NHP7 514 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms