RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 C16orf89Q6UX73 402 aa4.21□□□□□ -1.74
HMGB1P15-201ENST00000453854 RNF207Q6ZRF8 634 aa4.21□□□□□ -1.74
HMGB1P15-201ENST00000453854 PTCHD4Q6ZW05 846 aa4.21□□□□□ -1.74
HMGB1P15-201ENST00000453854 GET4Q7L5D6 327 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P15-201ENST00000453854 MRGPREQ86SM8 312 aa4.21□□□□□ -1.74
HMGB1P15-201ENST00000453854 CREBRFQ8IUR6 639 aa4.21□□□□□ -1.74
HMGB1P15-201ENST00000453854 PTGR2Q8N8N7 351 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P15-201ENST00000453854 TOR1AIP2Q8NFQ8 470 aa4.21□□□□□ -1.74
HMGB1P15-201ENST00000453854 GLMPQ8WWB7 406 aa4.21□□□□□ -1.74
HMGB1P15-201ENST00000453854 HAS1Q92839 578 aa4.21□□□□□ -1.74
HMGB1P15-201ENST00000453854 HVCN1Q96D96 273 aa4.21□□□□□ -1.74
HMGB1P15-201ENST00000453854 VPS50Q96JG6 964 aa4.21□□□□□ -1.74
HMGB1P15-201ENST00000453854 FAR2Q96K12 515 aa4.21□□□□□ -1.74
HMGB1P15-201ENST00000453854 PKNOX2Q96KN3 472 aa4.21□□□□□ -1.74
HMGB1P15-201ENST00000453854 SORCS2Q96PQ0 1159 aa4.21□□□□□ -1.74
HMGB1P15-201ENST00000453854 AGXT2Q9BYV1 514 aa4.21□□□□□ -1.74
HMGB1P15-201ENST00000453854 GPR63Q9BZJ6 419 aa4.21□□□□□ -1.74
HMGB1P15-201ENST00000453854 SERTAD4Q9NUC0 356 aa4.21□□□□□ -1.74
HMGB1P15-201ENST00000453854 FBXO28Q9NVF7 368 aa4.21□□□□□ -1.74
HMGB1P15-201ENST00000453854 RRP7AQ9Y3A4 280 aaKnown RBP4.21□□□□□ -1.74
HMGB1P15-201ENST00000453854 SYNJ1O43426 1573 aa4.21□□□□□ -1.74
HMGB1P15-201ENST00000453854 MAST3O60307 1309 aa4.21□□□□□ -1.74
HMGB1P15-201ENST00000453854 ADGRL1O94910 1474 aa4.2□□□□□ -1.74
HMGB1P15-201ENST00000453854 STX16-NPEPL1H3BU86 382 aa4.2□□□□□ -1.74
HMGB1P15-201ENST00000453854 STX16O14662 325 aa4.2□□□□□ -1.74
HMGB1P15-201ENST00000453854 SEPT4O43236 478 aa4.2□□□□□ -1.74
HMGB1P15-201ENST00000453854 MBPP02686 304 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P15-201ENST00000453854 DLDP09622 509 aaKnown RBP4.2□□□□□ -1.74
HMGB1P15-201ENST00000453854 IFIT1P09914 478 aaKnown RBP4.2□□□□□ -1.74
HMGB1P15-201ENST00000453854 ATP1A3P13637 1013 aa4.2□□□□□ -1.74
HMGB1P15-201ENST00000453854 ALADP13716 330 aa4.2□□□□□ -1.74
HMGB1P15-201ENST00000453854 ZFXP17010 805 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P15-201ENST00000453854 PTGS2P35354 604 aa4.2□□□□□ -1.74
HMGB1P15-201ENST00000453854 CLNS1AP54105 237 aaKnown RBP4.2□□□□□ -1.74
HMGB1P15-201ENST00000453854 SUMO2P61956 95 aaKnown RBP4.2□□□□□ -1.74
HMGB1P15-201ENST00000453854 E2F1Q01094 437 aa4.2□□□□□ -1.74
HMGB1P15-201ENST00000453854 TLE3Q04726 772 aa4.2□□□□□ -1.74
HMGB1P15-201ENST00000453854 ZNF484Q5JVG2 852 aa4.2□□□□□ -1.74
HMGB1P15-201ENST00000453854 ATG16L1Q676U5 607 aa4.2□□□□□ -1.74
HMGB1P15-201ENST00000453854 ANO7Q6IWH7 933 aa4.2□□□□□ -1.74
HMGB1P15-201ENST00000453854 FAM180BQ6P0A1 224 aa4.2□□□□□ -1.74
HMGB1P15-201ENST00000453854 DPY19L3Q6ZPD9 716 aa4.2□□□□□ -1.74
HMGB1P15-201ENST00000453854 Q6ZWC4 215 aa4.2□□□□□ -1.74
HMGB1P15-201ENST00000453854 KRT27Q7Z3Y8 459 aa4.2□□□□□ -1.74
HMGB1P15-201ENST00000453854 WDR53Q7Z5U6 358 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P15-201ENST00000453854 TBC1D1Q86TI0 1168 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P15-201ENST00000453854 ZSCAN30Q86W11 494 aa4.2□□□□□ -1.74
HMGB1P15-201ENST00000453854 TTC30BQ8N4P2 665 aa4.2□□□□□ -1.74
HMGB1P15-201ENST00000453854 SIRT6Q8N6T7 355 aa4.2□□□□□ -1.74
HMGB1P15-201ENST00000453854 XAGE5Q8WWM1 108 aa4.2□□□□□ -1.74
HMGB1P15-201ENST00000453854 RFFLQ8WZ73 363 aa4.2□□□□□ -1.74
HMGB1P15-201ENST00000453854 TRMT61AQ96FX7 289 aaKnown RBP4.2□□□□□ -1.74
HMGB1P15-201ENST00000453854 PRR11Q96HE9 360 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P15-201ENST00000453854 FBXL20Q96IG2 436 aa4.2□□□□□ -1.74
HMGB1P15-201ENST00000453854 Q96MF0 132 aa4.2□□□□□ -1.74
HMGB1P15-201ENST00000453854 EIF3CQ99613 913 aaKnown RBP4.2□□□□□ -1.74
HMGB1P15-201ENST00000453854 AIFM2Q9BRQ8 373 aa4.2□□□□□ -1.74
HMGB1P15-201ENST00000453854 THAP7Q9BT49 309 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P15-201ENST00000453854 DPCDQ9BVM2 203 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P15-201ENST00000453854 SAP30LQ9HAJ7 183 aa4.2□□□□□ -1.74
HMGB1P15-201ENST00000453854 PLEKHA2Q9HB19 425 aa4.2□□□□□ -1.74
HMGB1P15-201ENST00000453854 ANKFY1Q9P2R3 1169 aa4.2□□□□□ -1.74
HMGB1P15-201ENST00000453854 BAG5Q9UL15 447 aa4.2□□□□□ -1.74
HMGB1P15-201ENST00000453854 IFT140Q96RY7 1462 aa4.19□□□□□ -1.74
HMGB1P15-201ENST00000453854 CYP3A7-CYP3A51PA0A087WV96 503 aa4.19□□□□□ -1.74
HMGB1P15-201ENST00000453854 ANKRD18BA2A2Z9 1011 aa4.19□□□□□ -1.74
HMGB1P15-201ENST00000453854 F5H0A9 414 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P15-201ENST00000453854 HNRNPRO43390 633 aaKnown RBP4.19□□□□□ -1.74
HMGB1P15-201ENST00000453854 CA12O43570 354 aa4.19□□□□□ -1.74
HMGB1P15-201ENST00000453854 PEX1O43933 1283 aa4.19□□□□□ -1.74
HMGB1P15-201ENST00000453854 CHN1P15882 459 aa4.19□□□□□ -1.74
HMGB1P15-201ENST00000453854 IGFBP2P18065 325 aa4.19□□□□□ -1.74
HMGB1P15-201ENST00000453854 MATN1P21941 496 aa4.19□□□□□ -1.74
HMGB1P15-201ENST00000453854 TGM1P22735 817 aa4.19□□□□□ -1.74
HMGB1P15-201ENST00000453854 CYP3A7P24462 503 aa4.19□□□□□ -1.74
HMGB1P15-201ENST00000453854 KRT9P35527 623 aa4.19□□□□□ -1.74
HMGB1P15-201ENST00000453854 DIO1P49895 249 aa4.19□□□□□ -1.74
HMGB1P15-201ENST00000453854 NAP1L1P55209 391 aaKnown RBP4.19□□□□□ -1.74
HMGB1P15-201ENST00000453854 TPTEP56180 551 aa4.19□□□□□ -1.74
HMGB1P15-201ENST00000453854 PDCLQ13371 301 aa4.19□□□□□ -1.74
HMGB1P15-201ENST00000453854 BFSP2Q13515 415 aa4.19□□□□□ -1.74
HMGB1P15-201ENST00000453854 BAK1Q16611 211 aa4.19□□□□□ -1.74
HMGB1P15-201ENST00000453854 SPECC1Q5M775 1068 aa4.19□□□□□ -1.74
HMGB1P15-201ENST00000453854 CBWD5Q5RIA9 395 aa4.19□□□□□ -1.74
HMGB1P15-201ENST00000453854 SLC9C2Q5TAH2 1124 aa4.19□□□□□ -1.74
HMGB1P15-201ENST00000453854 PARS2Q7L3T8 475 aaKnown RBP4.19□□□□□ -1.74
HMGB1P15-201ENST00000453854 ZNF551Q7Z340 670 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P15-201ENST00000453854 SFTPA1Q8IWL2 248 aa4.19□□□□□ -1.74
HMGB1P15-201ENST00000453854 FSIP1Q8NA03 581 aa4.19□□□□□ -1.74
HMGB1P15-201ENST00000453854 OR52L2PQ8NGH6 319 aa4.19□□□□□ -1.74
HMGB1P15-201ENST00000453854 ST8SIA4Q92187 359 aa4.19□□□□□ -1.74
HMGB1P15-201ENST00000453854 RRP36Q96EU6 259 aaKnown RBP4.19□□□□□ -1.74
HMGB1P15-201ENST00000453854 ZNF503Q96F45 646 aa4.19□□□□□ -1.74
HMGB1P15-201ENST00000453854 LENG8Q96PV6 779 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P15-201ENST00000453854 PLEKHG4BQ96PX9 1271 aa4.19□□□□□ -1.74
HMGB1P15-201ENST00000453854 PIGSQ96S52 555 aa4.19□□□□□ -1.74
HMGB1P15-201ENST00000453854 MLST8Q9BVC4 326 aa4.19□□□□□ -1.74
HMGB1P15-201ENST00000453854 WDR11Q9BZH6 1224 aa4.19□□□□□ -1.74
HMGB1P15-201ENST00000453854 ARHGAP39Q9C0H5 1083 aa4.19□□□□□ -1.74
HMGB1P15-201ENST00000453854 CDCP1Q9H5V8 836 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms