RNA–Protein interactions for RNA: ENST00000452508.6

ATM-203, Transcript of ATM serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATM, Length 12,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-203ENST00000452508 DUSP28Q4G0W2 176 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 RRM2BQ7LG56 351 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 LINC00301Q8NCQ3 95 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 QRFPRQ96P65 431 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 SPON2Q9BUD6 331 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 WDR18Q9BV38 432 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 TRIT1Q9H3H1 467 aaKnown RBP3.68□□□□□ -1.82
ATM-203ENST00000452508 POLD4Q9HCU8 107 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 DDX4Q9NQI0 724 aaKnown RBP3.68□□□□□ -1.82
ATM-203ENST00000452508 CNGB3Q9NQW8 809 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 FETUBQ9UGM5 382 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 NAGPAQ9UK23 515 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 TRPM3Q9HCF6 1732 aaPredicted RBP3.68□□□□□ -1.82
ATM-203ENST00000452508 CACNB4O00305 520 aaPredicted RBP3.68□□□□□ -1.82
ATM-203ENST00000452508 CD3EAPO15446 510 aaKnown RBP3.68□□□□□ -1.82
ATM-203ENST00000452508 TIMM44O43615 452 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 DUSP11O75319 330 aaKnown RBP3.68□□□□□ -1.82
ATM-203ENST00000452508 CTDNEP1O95476 244 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 CSH1P0DML2 217 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 CSH2P0DML3 217 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 DR1Q01658 176 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 EFTUD2Q15029 972 aaKnown RBP eCLIP3.68□□□□□ -1.822e-9■■■■■ 27.4
ATM-203ENST00000452508 ZNHIT3Q15649 155 aaPredicted RBP3.68□□□□□ -1.82
ATM-203ENST00000452508 FBXO47Q5MNV8 452 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 CNKSR3Q6P9H4 555 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 DEFB128Q7Z7B8 93 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 FAM213AQ9BRX8 229 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.68□□□□□ -1.82
ATM-203ENST00000452508 DPP3Q9NY33 737 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 GTSE1Q9NYZ3 720 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 DDX20Q9UHI6 824 aaKnown RBP3.68□□□□□ -1.82
ATM-203ENST00000452508 PKD1L3Q7Z443 1732 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 MAGEA13PA6NCF6 341 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 RPA1P27694 616 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 CCR1P32246 355 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 COPS2P61201 443 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 CDK18Q07002 472 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 KRT72Q14CN4 511 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 PTGES3Q15185 160 aaKnown RBP3.68□□□□□ -1.82
ATM-203ENST00000452508 WLSQ5T9L3 541 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 C4orf19Q8IY42 314 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 PIGOQ8TEQ8 1089 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 LRRC39Q96DD0 335 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 CYFIP2Q96F07 1278 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 EEF2KMTQ96G04 330 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 C1orf50Q9BV19 199 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 SMYD2Q9NRG4 433 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 TAB2Q9NYJ8 693 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 PCDHA5Q9Y5H7 936 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 RAD54BQ9Y620 910 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.68□□□□□ -1.82
ATM-203ENST00000452508 B3GAT3O94766 335 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 C7P10643 843 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 ATP1A3P13637 1013 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 PRKAR2AP13861 404 aaKnown RBP3.68□□□□□ -1.82
ATM-203ENST00000452508 ZNF24P17028 368 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 GPC5P78333 572 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 DCTN2Q13561 401 aaKnown RBP3.68□□□□□ -1.82
ATM-203ENST00000452508 PKN3Q6P5Z2 889 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 TXNDC11Q6PKC3 985 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 RGL4Q8IZJ4 473 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 CERS5Q8N5B7 392 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 TMEM159Q96B96 161 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 CLPBQ9H078 707 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 SYTL2Q9HCH5 934 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 TBX20Q9UMR3 447 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 PCDHB2Q9Y5E7 798 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 ARPC4-TTLL3A0A0A6YYG9 625 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 OR6C75A6NL08 312 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 TRPC5OSA6NMA1 111 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 PLK4O00444 970 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 ATP2C2O75185 946 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 GTF2E2P29084 291 aaKnown RBP3.68□□□□□ -1.82
ATM-203ENST00000452508 OTUD4Q01804 1114 aaKnown RBP3.68□□□□□ -1.82
ATM-203ENST00000452508 IFT88Q13099 833 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 TOP3AQ13472 1001 aaPredicted RBP3.68□□□□□ -1.82
ATM-203ENST00000452508 SNRNP35Q16560 246 aaKnown RBP3.68□□□□□ -1.82
ATM-203ENST00000452508 FNDC3BQ53EP0 1204 aaKnown RBP3.68□□□□□ -1.82
ATM-203ENST00000452508 CHMP1BQ7LBR1 199 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 SFR1Q86XK3 245 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 SLC35F6Q8N357 371 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 OMA1Q96E52 524 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 YIPF2Q9BWQ6 316 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 SETD4Q9NVD3 440 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 PSTPIP1O43586 416 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 CCDC166P0CW27 439 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 FBXW10Q5XX13 1052 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 C18orf25Q96B23 403 aaPredicted RBP3.68□□□□□ -1.82
ATM-203ENST00000452508 IRX2Q9BZI1 471 aaPredicted RBP3.68□□□□□ -1.82
ATM-203ENST00000452508 LATS2Q9NRM7 1088 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 SIX4Q9UIU6 781 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 SYN3O14994 580 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 SOX30O94993 753 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 NQO1P15559 274 aaKnown RBP3.68□□□□□ -1.82
ATM-203ENST00000452508 EEF1DP29692 281 aaKnown RBP3.68□□□□□ -1.82
ATM-203ENST00000452508 SREBF1P36956 1147 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 RPS6P62753 249 aaKnown RBP3.68□□□□□ -1.82
ATM-203ENST00000452508 LBRQ14739 615 aaKnown RBP3.68□□□□□ -1.82
ATM-203ENST00000452508 FAM83EQ2M2I3 478 aa3.68□□□□□ -1.82
ATM-203ENST00000452508 BOLA3Q53S33 107 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms