RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 MAMLD1Q13495 774 aa10.23□□□□□ -0.77
CCDC171-203ENST00000449575 DAB2IPQ5VWQ8 1189 aa10.23□□□□□ -0.77
CCDC171-203ENST00000449575 VPS36Q86VN1 386 aa10.23□□□□□ -0.77
CCDC171-203ENST00000449575 ARHGAP18Q8N392 663 aa10.23□□□□□ -0.77
CCDC171-203ENST00000449575 C3orf20Q8ND61 904 aa10.23□□□□□ -0.77
CCDC171-203ENST00000449575 RNF139Q8WU17 664 aa10.23□□□□□ -0.77
CCDC171-203ENST00000449575 MCEEQ96PE7 176 aa10.23□□□□□ -0.77
CCDC171-203ENST00000449575 SELENOOQ9BVL4 669 aa10.23□□□□□ -0.77
CCDC171-203ENST00000449575 TMPRSS4Q9NRS4 437 aa10.23□□□□□ -0.77
CCDC171-203ENST00000449575 MUTYHQ9UIF7 546 aa10.23□□□□□ -0.77
CCDC171-203ENST00000449575 REXO2Q9Y3B8 237 aaKnown RBP10.23□□□□□ -0.77
CCDC171-203ENST00000449575 WNT6Q9Y6F9 365 aa10.23□□□□□ -0.77
CCDC171-203ENST00000449575 ZFP37Q9Y6Q3 630 aaPredicted RBP10.23□□□□□ -0.77
CCDC171-203ENST00000449575 TECTAO75443 2155 aa10.23□□□□□ -0.77
CCDC171-203ENST00000449575 GOLGA6L7A0A1B0GV03 622 aa10.23□□□□□ -0.77
CCDC171-203ENST00000449575 OTOL1A6NHN0 477 aaPredicted RBP10.23□□□□□ -0.77
CCDC171-203ENST00000449575 I6L893 689 aaPredicted RBP10.23□□□□□ -0.77
CCDC171-203ENST00000449575 DAB1O75553 588 aa10.23□□□□□ -0.77
CCDC171-203ENST00000449575 TRUB2O95900 331 aaKnown RBP10.23□□□□□ -0.77
CCDC171-203ENST00000449575 KRT3P12035 628 aa10.23□□□□□ -0.77
CCDC171-203ENST00000449575 EZRP15311 586 aaKnown RBP10.23□□□□□ -0.77
CCDC171-203ENST00000449575 GPC5P78333 572 aa10.23□□□□□ -0.77
CCDC171-203ENST00000449575 ATP11AP98196 1134 aa10.23□□□□□ -0.77
CCDC171-203ENST00000449575 ZNF252P-AS1Q0IIN9 211 aa10.23□□□□□ -0.77
CCDC171-203ENST00000449575 USP4Q13107 963 aa10.23□□□□□ -0.77
CCDC171-203ENST00000449575 ZKSCAN8Q15776 578 aaPredicted RBP10.23□□□□□ -0.77
CCDC171-203ENST00000449575 C11orf91Q3C1V1 193 aa10.23□□□□□ -0.77
CCDC171-203ENST00000449575 CEP85LQ5SZL2 805 aa10.23□□□□□ -0.77
CCDC171-203ENST00000449575 ALS2CLQ60I27 953 aa10.23□□□□□ -0.77
CCDC171-203ENST00000449575 PLEKHA7Q6IQ23 1121 aa10.23□□□□□ -0.77
CCDC171-203ENST00000449575 MSANTD2Q6P1R3 559 aa10.23□□□□□ -0.77
CCDC171-203ENST00000449575 KLHDC10Q6PID8 442 aa10.23□□□□□ -0.77
CCDC171-203ENST00000449575 CCNI2Q6ZMN8 369 aaPredicted RBP10.23□□□□□ -0.77
CCDC171-203ENST00000449575 ZDHHC17Q8IUH5 632 aa10.23□□□□□ -0.77
CCDC171-203ENST00000449575 ZNF276Q8N554 614 aa10.23□□□□□ -0.77
CCDC171-203ENST00000449575 CELF5Q8N6W0 485 aaKnown RBP10.23□□□□□ -0.77
CCDC171-203ENST00000449575 ACRBPQ8NEB7 543 aa10.23□□□□□ -0.77
CCDC171-203ENST00000449575 TTC8Q8TAM2 541 aa10.23□□□□□ -0.77
CCDC171-203ENST00000449575 RXFP2Q8WXD0 754 aa10.23□□□□□ -0.77
CCDC171-203ENST00000449575 ELSPBP1Q96BH3 223 aa10.23□□□□□ -0.77
CCDC171-203ENST00000449575 BTBD6Q96KE9 485 aa10.23□□□□□ -0.77
CCDC171-203ENST00000449575 RUFY1Q96T51 708 aa10.23□□□□□ -0.77
CCDC171-203ENST00000449575 TBCBQ99426 244 aa10.23□□□□□ -0.77
CCDC171-203ENST00000449575 ANLNQ9NQW6 1124 aa10.23□□□□□ -0.77
CCDC171-203ENST00000449575 XPO7Q9UIA9 1087 aaKnown RBP10.23□□□□□ -0.77
CCDC171-203ENST00000449575 MYO18AQ92614 2054 aaKnown RBP10.23□□□□□ -0.77
CCDC171-203ENST00000449575 DOCK4Q8N1I0 1966 aa10.23□□□□□ -0.77
CCDC171-203ENST00000449575 RCCD1A6NED2 376 aa10.22□□□□□ -0.77
CCDC171-203ENST00000449575 C2CD4BA6NLJ0 364 aa10.22□□□□□ -0.77
CCDC171-203ENST00000449575 AGPSO00116 658 aa10.22□□□□□ -0.77
CCDC171-203ENST00000449575 SART1O43290 800 aaKnown RBP10.22□□□□□ -0.77
CCDC171-203ENST00000449575 IGLV3-25P01717 112 aa10.22□□□□□ -0.77
CCDC171-203ENST00000449575 MATKP42679 507 aa10.22□□□□□ -0.77
CCDC171-203ENST00000449575 EIF4EBP2Q13542 120 aaPredicted RBP10.22□□□□□ -0.77
CCDC171-203ENST00000449575 CDO1Q16878 200 aa10.22□□□□□ -0.77
CCDC171-203ENST00000449575 CCDC14Q49A88 953 aa10.22□□□□□ -0.77
CCDC171-203ENST00000449575 DNAJC24Q6P3W2 148 aa10.22□□□□□ -0.77
CCDC171-203ENST00000449575 CPNE8Q86YQ8 564 aa10.22□□□□□ -0.77
CCDC171-203ENST00000449575 BBS7Q8IWZ6 715 aa10.22□□□□□ -0.77
CCDC171-203ENST00000449575 BPIFB1Q8TDL5 484 aa10.22□□□□□ -0.77
CCDC171-203ENST00000449575 UHRF1Q96T88 793 aaPredicted RBP10.22□□□□□ -0.77
CCDC171-203ENST00000449575 NPY6RQ99463 290 aa10.22□□□□□ -0.77
CCDC171-203ENST00000449575 MAGEB5Q9BZ81 275 aa10.22□□□□□ -0.77
CCDC171-203ENST00000449575 ACTR5Q9H9F9 607 aaPredicted RBP10.22□□□□□ -0.77
CCDC171-203ENST00000449575 PIGVQ9NUD9 493 aa10.22□□□□□ -0.77
CCDC171-203ENST00000449575 ASNSD1Q9NWL6 643 aa10.22□□□□□ -0.77
CCDC171-203ENST00000449575 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.22□□□□□ -0.77
CCDC171-203ENST00000449575 STRIP2Q9ULQ0 834 aa10.22□□□□□ -0.77
CCDC171-203ENST00000449575 SIGLEC16A6NMB1 481 aa10.22□□□□□ -0.77
CCDC171-203ENST00000449575 SRRM3A6NNA2 597 aaPredicted RBP10.22□□□□□ -0.77
CCDC171-203ENST00000449575 M0QYT0 321 aa10.22□□□□□ -0.77
CCDC171-203ENST00000449575 MYO1FO00160 1098 aa10.22□□□□□ -0.77
CCDC171-203ENST00000449575 DPYSL4O14531 572 aa10.22□□□□□ -0.77
CCDC171-203ENST00000449575 ECI2O75521 394 aa10.22□□□□□ -0.77
CCDC171-203ENST00000449575 NEBLO76041 1014 aa10.22□□□□□ -0.77
CCDC171-203ENST00000449575 GLI1P08151 1106 aa10.22□□□□□ -0.77
CCDC171-203ENST00000449575 ARSAP15289 507 aa10.22□□□□□ -0.77
CCDC171-203ENST00000449575 WEE1P30291 646 aa10.22□□□□□ -0.77
CCDC171-203ENST00000449575 GDI1P31150 447 aa10.22□□□□□ -0.77
CCDC171-203ENST00000449575 SARNPP82979 210 aaKnown RBP10.22□□□□□ -0.77
CCDC171-203ENST00000449575 NME3Q13232 169 aa10.22□□□□□ -0.77
CCDC171-203ENST00000449575 MTSS1LQ765P7 747 aa10.22□□□□□ -0.77
CCDC171-203ENST00000449575 MFSD6LQ8IWD5 586 aa10.22□□□□□ -0.77
CCDC171-203ENST00000449575 NT5C3BQ969T7 300 aa10.22□□□□□ -0.77
CCDC171-203ENST00000449575 VCPIP1Q96JH7 1222 aa10.22□□□□□ -0.77
CCDC171-203ENST00000449575 DDX23Q9BUQ8 820 aaKnown RBP10.22□□□□□ -0.77
CCDC171-203ENST00000449575 EBF3Q9H4W6 596 aa10.22□□□□□ -0.77
CCDC171-203ENST00000449575 GTSE1Q9NYZ3 720 aa10.22□□□□□ -0.77
CCDC171-203ENST00000449575 SAR1BQ9Y6B6 198 aa10.22□□□□□ -0.77
CCDC171-203ENST00000449575 EPN1Q9Y6I3 576 aaPredicted RBP10.22□□□□□ -0.77
CCDC171-203ENST00000449575 SOBPA7XYQ1 873 aa10.21□□□□□ -0.77
CCDC171-203ENST00000449575 IRAK2O43187 625 aa10.21□□□□□ -0.77
CCDC171-203ENST00000449575 NDUFA10O95299 355 aa10.21□□□□□ -0.77
CCDC171-203ENST00000449575 PDGFRAP16234 1089 aa10.21□□□□□ -0.77
CCDC171-203ENST00000449575 PSMC3P17980 439 aa10.21□□□□□ -0.77
CCDC171-203ENST00000449575 NOS2P35228 1153 aa10.21□□□□□ -0.77
CCDC171-203ENST00000449575 SULT1E1P49888 294 aa10.21□□□□□ -0.77
CCDC171-203ENST00000449575 VCPP55072 806 aaKnown RBP10.21□□□□□ -0.77
CCDC171-203ENST00000449575 SNX16P57768 344 aa10.21□□□□□ -0.77
CCDC171-203ENST00000449575 ACTN3Q08043 901 aaPredicted RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms