RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 LPCAT1Q8NF37 534 aa11.49□□□□□ -0.57
FN1-211ENST00000443816 ATP13A3Q9H7F0 1226 aa11.49□□□□□ -0.57
FN1-211ENST00000443816 GPAMQ9HCL2 828 aa11.49□□□□□ -0.57
FN1-211ENST00000443816 RBM12Q9NTZ6 932 aaKnown RBP11.49□□□□□ -0.57
FN1-211ENST00000443816 POLG2Q9UHN1 485 aa11.49□□□□□ -0.57
FN1-211ENST00000443816 FRMPD4Q14CM0 1322 aa11.49□□□□□ -0.57
FN1-211ENST00000443816 KRT6AP02538 564 aa11.49□□□□□ -0.57
FN1-211ENST00000443816 KRT6BP04259 564 aa11.49□□□□□ -0.57
FN1-211ENST00000443816 HDCP19113 662 aa11.49□□□□□ -0.57
FN1-211ENST00000443816 MMP13P45452 471 aa11.49□□□□□ -0.57
FN1-211ENST00000443816 KRT6CP48668 564 aa11.49□□□□□ -0.57
FN1-211ENST00000443816 IYDQ6PHW0 289 aa11.49□□□□□ -0.57
FN1-211ENST00000443816 KIAA1324Q6UXG2 1013 aaKnown RBP11.49□□□□□ -0.57
FN1-211ENST00000443816 TPGS1Q6ZTW0 290 aa11.49□□□□□ -0.57
FN1-211ENST00000443816 SCUBE3Q8IX30 993 aa11.49□□□□□ -0.57
FN1-211ENST00000443816 B3GALNT2Q8NCR0 500 aa11.49□□□□□ -0.57
FN1-211ENST00000443816 PPP1R14AQ96A00 147 aa11.49□□□□□ -0.57
FN1-211ENST00000443816 TBCBQ99426 244 aa11.49□□□□□ -0.57
FN1-211ENST00000443816 OSBPL10Q9BXB5 764 aa11.49□□□□□ -0.57
FN1-211ENST00000443816 ZDHHC6Q9H6R6 413 aa11.49□□□□□ -0.57
FN1-211ENST00000443816 ZC4H2Q9NQZ6 224 aa11.49□□□□□ -0.57
FN1-211ENST00000443816 NCKIPSDQ9NZQ3 722 aa11.49□□□□□ -0.57
FN1-211ENST00000443816 TRPC4Q9UBN4 977 aa11.49□□□□□ -0.57
FN1-211ENST00000443816 SLIT3O75094 1523 aa11.49□□□□□ -0.57
FN1-211ENST00000443816 OPLAHO14841 1288 aa11.49□□□□□ -0.57
FN1-211ENST00000443816 ACAT1P24752 427 aaKnown RBP11.49□□□□□ -0.57
FN1-211ENST00000443816 HPCAL1P37235 193 aa11.49□□□□□ -0.57
FN1-211ENST00000443816 MDH1P40925 334 aaKnown RBP11.49□□□□□ -0.57
FN1-211ENST00000443816 MARSP56192 900 aaKnown RBP11.49□□□□□ -0.57
FN1-211ENST00000443816 MRPL28Q13084 256 aaKnown RBP11.49□□□□□ -0.57
FN1-211ENST00000443816 TRIP4Q15650 581 aaPredicted RBP11.49□□□□□ -0.57
FN1-211ENST00000443816 INSCQ1MX18 579 aa11.49□□□□□ -0.57
FN1-211ENST00000443816 SEL1L3Q68CR1 1132 aa11.49□□□□□ -0.57
FN1-211ENST00000443816 DCLRE1AQ6PJP8 1040 aa11.49□□□□□ -0.57
FN1-211ENST00000443816 BRSK2Q8IWQ3 736 aa11.49□□□□□ -0.57
FN1-211ENST00000443816 CNDP1Q96KN2 507 aa11.49□□□□□ -0.57
FN1-211ENST00000443816 TMEM237Q96Q45 408 aa11.49□□□□□ -0.57
FN1-211ENST00000443816 TKTL2Q9H0I9 626 aa11.49□□□□□ -0.57
FN1-211ENST00000443816 GIT1Q9Y2X7 761 aa11.49□□□□□ -0.57
FN1-211ENST00000443816 TRIM49D1C9J1S8 452 aa11.49□□□□□ -0.57
FN1-211ENST00000443816 H3BMM5 538 aa11.49□□□□□ -0.57
FN1-211ENST00000443816 SLITRK3O94933 977 aa11.49□□□□□ -0.57
FN1-211ENST00000443816 NPR3P17342 541 aa11.49□□□□□ -0.57
FN1-211ENST00000443816 CCL23P55773 120 aa11.49□□□□□ -0.57
FN1-211ENST00000443816 CDH17Q12864 832 aa11.49□□□□□ -0.57
FN1-211ENST00000443816 TOMM20Q15388 145 aa11.49□□□□□ -0.57
FN1-211ENST00000443816 GRTP1Q5TC63 336 aa11.49□□□□□ -0.57
FN1-211ENST00000443816 PTAR1Q7Z6K3 402 aaPredicted RBP11.49□□□□□ -0.57
FN1-211ENST00000443816 TRAPPC5Q8IUR0 188 aa11.49□□□□□ -0.57
FN1-211ENST00000443816 FBXO22Q8NEZ5 403 aa11.49□□□□□ -0.57
FN1-211ENST00000443816 WDR24Q96S15 920 aa11.49□□□□□ -0.57
FN1-211ENST00000443816 WDR18Q9BV38 432 aa11.49□□□□□ -0.57
FN1-211ENST00000443816 TMCO1Q9UM00 188 aa11.49□□□□□ -0.57
FN1-211ENST00000443816 KIF13AQ9H1H9 1805 aa11.49□□□□□ -0.57
FN1-211ENST00000443816 KDM4FA0A1W2PPD8 638 aa11.48□□□□□ -0.57
FN1-211ENST00000443816 LTFP02788 710 aa11.48□□□□□ -0.57
FN1-211ENST00000443816 PTPN1P18031 435 aaKnown RBP11.48□□□□□ -0.57
FN1-211ENST00000443816 SULT2A1Q06520 285 aa11.48□□□□□ -0.57
FN1-211ENST00000443816 DDR1Q08345 913 aa11.48□□□□□ -0.57
FN1-211ENST00000443816 FAXCQ5TGI0 409 aa11.48□□□□□ -0.57
FN1-211ENST00000443816 PLAGL2Q9UPG8 496 aa11.48□□□□□ -0.57
FN1-211ENST00000443816 PIK3CDO00329 1044 aa11.48□□□□□ -0.57
FN1-211ENST00000443816 WDR47O94967 919 aa11.48□□□□□ -0.57
FN1-211ENST00000443816 YBX3P16989 372 aaKnown RBP eCLIP11.48□□□□□ -0.572e-58■□□□□ 9.3
FN1-211ENST00000443816 NOS2P35228 1153 aa11.48□□□□□ -0.57
FN1-211ENST00000443816 TRAPPC12Q8WVT3 735 aa11.48□□□□□ -0.57
FN1-211ENST00000443816 CELF4Q9BZC1 486 aaKnown RBP11.48□□□□□ -0.57
FN1-211ENST00000443816 TLE6Q9H808 572 aa11.48□□□□□ -0.57
FN1-211ENST00000443816 MYO18AQ92614 2054 aaKnown RBP11.48□□□□□ -0.57
FN1-211ENST00000443816 PEAK1Q9H792 1746 aa11.48□□□□□ -0.57
FN1-211ENST00000443816 SEC24DO94855 1032 aaPredicted RBP11.48□□□□□ -0.57
FN1-211ENST00000443816 ZBTB48P10074 688 aaPredicted RBP11.48□□□□□ -0.57
FN1-211ENST00000443816 PRKAA2P54646 552 aa11.48□□□□□ -0.57
FN1-211ENST00000443816 ANKRD23Q86SG2 305 aa11.48□□□□□ -0.57
FN1-211ENST00000443816 CPA6Q8N4T0 437 aa11.48□□□□□ -0.57
FN1-211ENST00000443816 USP7Q93009 1102 aa11.48□□□□□ -0.57
FN1-211ENST00000443816 BBS4Q96RK4 519 aa11.48□□□□□ -0.57
FN1-211ENST00000443816 OSBPL6Q9BZF3 934 aa11.48□□□□□ -0.57
FN1-211ENST00000443816 PHACTR1Q9C0D0 580 aa11.48□□□□□ -0.57
FN1-211ENST00000443816 SOHLH2Q9NX45 425 aa11.48□□□□□ -0.57
FN1-211ENST00000443816 TRIM10Q9UDY6 481 aa11.48□□□□□ -0.57
FN1-211ENST00000443816 MAP3K6O95382 1288 aa11.48□□□□□ -0.57
FN1-211ENST00000443816 CYP3A4P08684 503 aa11.48□□□□□ -0.57
FN1-211ENST00000443816 GSTM1P09488 218 aa11.48□□□□□ -0.57
FN1-211ENST00000443816 CDC25CP30307 473 aa11.48□□□□□ -0.57
FN1-211ENST00000443816 NPY2RP49146 381 aa11.48□□□□□ -0.57
FN1-211ENST00000443816 PAGE2BQ5JRK9 111 aa11.48□□□□□ -0.57
FN1-211ENST00000443816 HELQQ8TDG4 1101 aa11.48□□□□□ -0.57
FN1-211ENST00000443816 GPN3Q9UHW5 284 aaPredicted RBP11.48□□□□□ -0.57
FN1-211ENST00000443816 MED1Q15648 1581 aaPredicted RBP11.48□□□□□ -0.57
FN1-211ENST00000443816 UBA1P22314 1058 aaKnown RBP11.48□□□□□ -0.57
FN1-211ENST00000443816 PIK3CGP48736 1102 aa11.48□□□□□ -0.57
FN1-211ENST00000443816 SLC6A3Q01959 620 aa11.48□□□□□ -0.57
FN1-211ENST00000443816 MKRN4PQ13434 485 aaPredicted RBP11.48□□□□□ -0.57
FN1-211ENST00000443816 ADGRA1Q86SQ6 560 aa11.48□□□□□ -0.57
FN1-211ENST00000443816 ADCK1Q86TW2 530 aa11.48□□□□□ -0.57
FN1-211ENST00000443816 ZNF606Q8WXB4 792 aa11.48□□□□□ -0.57
FN1-211ENST00000443816 HPS4Q9NQG7 708 aa11.48□□□□□ -0.57
FN1-211ENST00000443816 TMEM120BA0PK00 339 aa11.48□□□□□ -0.57
FN1-211ENST00000443816 FAM86B1E9PN63 330 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms