RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 CALB1P05937 261 aa13.33□□□□□ -0.28
PDLIM2-212ENST00000443561 GZMAP12544 262 aa13.33□□□□□ -0.28
PDLIM2-212ENST00000443561 EIF4A3P38919 411 aaKnown RBP13.33□□□□□ -0.28
PDLIM2-212ENST00000443561 HDAC4P56524 1084 aa13.33□□□□□ -0.28
PDLIM2-212ENST00000443561 SATB1Q01826 763 aa13.33□□□□□ -0.28
PDLIM2-212ENST00000443561 NME3Q13232 169 aa13.33□□□□□ -0.28
PDLIM2-212ENST00000443561 TRIM14Q14142 442 aa13.33□□□□□ -0.28
PDLIM2-212ENST00000443561 GEN1Q17RS7 908 aa13.33□□□□□ -0.28
PDLIM2-212ENST00000443561 TDRD12Q587J7 1177 aaKnown RBP13.33□□□□□ -0.28
PDLIM2-212ENST00000443561 ADGRF1Q5T601 910 aa13.33□□□□□ -0.28
PDLIM2-212ENST00000443561 RAP1GAP2Q684P5 730 aa13.33□□□□□ -0.28
PDLIM2-212ENST00000443561 NUGGCQ68CJ6 796 aa13.33□□□□□ -0.28
PDLIM2-212ENST00000443561 CYP4V2Q6ZWL3 525 aaPredicted RBP13.33□□□□□ -0.28
PDLIM2-212ENST00000443561 CIR1Q86X95 450 aaPredicted RBP13.33□□□□□ -0.28
PDLIM2-212ENST00000443561 TERB1Q8NA31 727 aa13.33□□□□□ -0.28
PDLIM2-212ENST00000443561 OR52K2Q8NGK3 314 aa13.33□□□□□ -0.28
PDLIM2-212ENST00000443561 ARHGEF26Q96DR7 871 aa13.33□□□□□ -0.28
PDLIM2-212ENST00000443561 MRFAP1L1Q96HT8 127 aa13.33□□□□□ -0.28
PDLIM2-212ENST00000443561 NELL2Q99435 816 aa13.33□□□□□ -0.28
PDLIM2-212ENST00000443561 TRIM62Q9BVG3 475 aa13.33□□□□□ -0.28
PDLIM2-212ENST00000443561 PACSIN1Q9BY11 444 aa13.33□□□□□ -0.28
PDLIM2-212ENST00000443561 TRIM5Q9C035 493 aa13.33□□□□□ -0.28
PDLIM2-212ENST00000443561 PRMT8Q9NR22 394 aaPredicted RBP13.33□□□□□ -0.28
PDLIM2-212ENST00000443561 ADAMTS1Q9UHI8 967 aa13.33□□□□□ -0.28
PDLIM2-212ENST00000443561 ZNF510Q9Y2H8 683 aa13.33□□□□□ -0.28
PDLIM2-212ENST00000443561 HS3ST4Q9Y661 456 aa13.33□□□□□ -0.28
PDLIM2-212ENST00000443561 K7ESF4 209 aa13.32□□□□□ -0.28
PDLIM2-212ENST00000443561 KAT7O95251 611 aa13.32□□□□□ -0.28
PDLIM2-212ENST00000443561 FTLP02792 175 aaPredicted RBP13.32□□□□□ -0.28
PDLIM2-212ENST00000443561 CCDC172P0C7W6 258 aa13.32□□□□□ -0.28
PDLIM2-212ENST00000443561 TACR2P21452 398 aa13.32□□□□□ -0.28
PDLIM2-212ENST00000443561 PLA2G5P39877 138 aa13.32□□□□□ -0.28
PDLIM2-212ENST00000443561 PTPN9P43378 593 aa13.32□□□□□ -0.28
PDLIM2-212ENST00000443561 HARS2P49590 506 aaKnown RBP13.32□□□□□ -0.28
PDLIM2-212ENST00000443561 ATP11AP98196 1134 aa13.32□□□□□ -0.28
PDLIM2-212ENST00000443561 DMWDQ09019 674 aa13.32□□□□□ -0.28
PDLIM2-212ENST00000443561 NR1H3Q13133 447 aa13.32□□□□□ -0.28
PDLIM2-212ENST00000443561 MAPK8IP2Q13387 824 aaPredicted RBP13.32□□□□□ -0.28
PDLIM2-212ENST00000443561 MAMLD1Q13495 774 aa13.32□□□□□ -0.28
PDLIM2-212ENST00000443561 PPP2R5DQ14738 602 aa13.32□□□□□ -0.28
PDLIM2-212ENST00000443561 C1orf228Q6PIY5 440 aa13.32□□□□□ -0.28
PDLIM2-212ENST00000443561 KIAA0907Q7Z7F0 614 aaPredicted RBP13.32□□□□□ -0.28
PDLIM2-212ENST00000443561 FAM131BQ86XD5 332 aa13.32□□□□□ -0.28
PDLIM2-212ENST00000443561 CPNE8Q86YQ8 564 aa13.32□□□□□ -0.28
PDLIM2-212ENST00000443561 UNC45BQ8IWX7 931 aa13.32□□□□□ -0.28
PDLIM2-212ENST00000443561 USP33Q8TEY7 942 aa13.32□□□□□ -0.28
PDLIM2-212ENST00000443561 IGSF8Q969P0 613 aa13.32□□□□□ -0.28
PDLIM2-212ENST00000443561 MCEEQ96PE7 176 aa13.32□□□□□ -0.28
PDLIM2-212ENST00000443561 PNKPQ96T60 521 aa13.32□□□□□ -0.28
PDLIM2-212ENST00000443561 CD248Q9HCU0 757 aa13.32□□□□□ -0.28
PDLIM2-212ENST00000443561 ARHGEF4Q9NR80 690 aa13.32□□□□□ -0.28
PDLIM2-212ENST00000443561 DNAJC17Q9NVM6 304 aaKnown RBP13.32□□□□□ -0.28
PDLIM2-212ENST00000443561 WDR35Q9P2L0 1181 aa13.32□□□□□ -0.28
PDLIM2-212ENST00000443561 ZNF212Q9UDV6 495 aa13.32□□□□□ -0.28
PDLIM2-212ENST00000443561 MRPS17Q9Y2R5 130 aaKnown RBP13.32□□□□□ -0.28
PDLIM2-212ENST00000443561 PLXND1Q9Y4D7 1925 aa13.32□□□□□ -0.28
PDLIM2-212ENST00000443561 ADAM23O75077 832 aa13.31□□□□□ -0.28
PDLIM2-212ENST00000443561 RTN2O75298 545 aa13.31□□□□□ -0.28
PDLIM2-212ENST00000443561 PAGE1O75459 146 aa13.31□□□□□ -0.28
PDLIM2-212ENST00000443561 KRT3P12035 628 aa13.31□□□□□ -0.28
PDLIM2-212ENST00000443561 DRD1P21728 446 aa13.31□□□□□ -0.28
PDLIM2-212ENST00000443561 FECHP22830 423 aa13.31□□□□□ -0.28
PDLIM2-212ENST00000443561 HLA-FP30511 346 aa13.31□□□□□ -0.28
PDLIM2-212ENST00000443561 CHKAP35790 457 aa13.31□□□□□ -0.28
PDLIM2-212ENST00000443561 SEC13P55735 322 aa13.31□□□□□ -0.28
PDLIM2-212ENST00000443561 SNX16P57768 344 aa13.31□□□□□ -0.28
PDLIM2-212ENST00000443561 DEUP1Q05D60 604 aa13.31□□□□□ -0.28
PDLIM2-212ENST00000443561 GFPT1Q06210 699 aaPredicted RBP13.31□□□□□ -0.28
PDLIM2-212ENST00000443561 CDO1Q16878 200 aa13.31□□□□□ -0.28
PDLIM2-212ENST00000443561 FSCBQ5H9T9 825 aa13.31□□□□□ -0.28
PDLIM2-212ENST00000443561 DGKKQ5KSL6 1271 aa13.31□□□□□ -0.28
PDLIM2-212ENST00000443561 MANEALQ5VSG8 457 aa13.31□□□□□ -0.28
PDLIM2-212ENST00000443561 DAB2IPQ5VWQ8 1189 aa13.31□□□□□ -0.28
PDLIM2-212ENST00000443561 EGFLAMQ63HQ2 1017 aa13.31□□□□□ -0.28
PDLIM2-212ENST00000443561 FBXL22Q6P050 247 aa13.31□□□□□ -0.28
PDLIM2-212ENST00000443561 DNAJC24Q6P3W2 148 aa13.31□□□□□ -0.28
PDLIM2-212ENST00000443561 TSSK4Q6SA08 328 aa13.31□□□□□ -0.28
PDLIM2-212ENST00000443561 CFAP52Q8N1V2 620 aa13.31□□□□□ -0.28
PDLIM2-212ENST00000443561 CCDC185Q8N715 623 aa13.31□□□□□ -0.28
PDLIM2-212ENST00000443561 MSANTD4Q8NCY6 345 aa13.31□□□□□ -0.28
PDLIM2-212ENST00000443561 OR8K1Q8NGG5 319 aa13.31□□□□□ -0.28
PDLIM2-212ENST00000443561 NELL1Q92832 810 aa13.31□□□□□ -0.28
PDLIM2-212ENST00000443561 VCPIP1Q96JH7 1222 aa13.31□□□□□ -0.28
PDLIM2-212ENST00000443561 BTN2A3PQ96KV6 586 aa13.31□□□□□ -0.28
PDLIM2-212ENST00000443561 PEBP4Q96S96 227 aa13.31□□□□□ -0.28
PDLIM2-212ENST00000443561 ACOX2Q99424 681 aa13.31□□□□□ -0.28
PDLIM2-212ENST00000443561 THAP2Q9H0W7 228 aa13.31□□□□□ -0.28
PDLIM2-212ENST00000443561 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.31□□□□□ -0.28
PDLIM2-212ENST00000443561 RRN3Q9NYV6 651 aa13.31□□□□□ -0.28
PDLIM2-212ENST00000443561 INTS6Q9UL03 887 aaKnown RBP13.31□□□□□ -0.28
PDLIM2-212ENST00000443561 SLC27A6Q9Y2P4 619 aa13.31□□□□□ -0.28
PDLIM2-212ENST00000443561 VPS13AQ96RL7 3174 aa13.3□□□□□ -0.28
PDLIM2-212ENST00000443561 SSU72P8A0A1W2PR75 194 aa13.3□□□□□ -0.28
PDLIM2-212ENST00000443561 TMEM191CA6NGB0 347 aa13.3□□□□□ -0.28
PDLIM2-212ENST00000443561 CHURC1-FNTBB4DL54 471 aa13.3□□□□□ -0.28
PDLIM2-212ENST00000443561 FAM72CH0Y354 149 aa13.3□□□□□ -0.28
PDLIM2-212ENST00000443561 TBL1XO60907 577 aa13.3□□□□□ -0.28
PDLIM2-212ENST00000443561 APOEP02649 317 aa13.3□□□□□ -0.28
PDLIM2-212ENST00000443561 TPM3P06753 285 aa13.3□□□□□ -0.28
PDLIM2-212ENST00000443561 TCF4P15884 667 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms