RNA–Protein interactions for RNA: ENST00000441141.5

VPS8-208, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-208ENST00000441141 SF3A3Q12874 501 aaKnown RBP eCLIP3.72□□□□□ -1.81
VPS8-208ENST00000441141 PFKFB3Q16875 520 aaPredicted RBP3.72□□□□□ -1.81
VPS8-208ENST00000441141 PRAMEF17Q5VTA0 474 aa3.72□□□□□ -1.81
VPS8-208ENST00000441141 MSANTD2Q6P1R3 559 aa3.72□□□□□ -1.81
VPS8-208ENST00000441141 TMEM88Q6PEY1 159 aa3.72□□□□□ -1.81
VPS8-208ENST00000441141 ZNF354CQ86Y25 554 aa3.72□□□□□ -1.81
VPS8-208ENST00000441141 ANKRD18AQ8IVF6 992 aa3.72□□□□□ -1.81
VPS8-208ENST00000441141 SMAP1Q8IYB5 467 aaPredicted RBP3.72□□□□□ -1.81
VPS8-208ENST00000441141 SEMA6DQ8NFY4 1073 aa3.72□□□□□ -1.81
VPS8-208ENST00000441141 OR6Y1Q8NGX8 325 aa3.72□□□□□ -1.81
VPS8-208ENST00000441141 SLC22A17Q8WUG5 538 aa3.72□□□□□ -1.81
VPS8-208ENST00000441141 AKAP1Q92667 903 aaKnown RBP eCLIP3.72□□□□□ -1.81
VPS8-208ENST00000441141 SDCCAG3Q96C92 435 aa3.72□□□□□ -1.81
VPS8-208ENST00000441141 EDC3Q96F86 508 aaKnown RBP3.72□□□□□ -1.81
VPS8-208ENST00000441141 ASB2Q96Q27 587 aa3.72□□□□□ -1.81
VPS8-208ENST00000441141 FAM167BQ9BTA0 163 aa3.72□□□□□ -1.81
VPS8-208ENST00000441141 FSCN3Q9NQT6 498 aa3.72□□□□□ -1.81
VPS8-208ENST00000441141 PRDM8Q9NQV8 689 aa3.72□□□□□ -1.81
VPS8-208ENST00000441141 KIF17Q9P2E2 1029 aa3.72□□□□□ -1.81
VPS8-208ENST00000441141 LPAR3Q9UBY5 353 aa3.72□□□□□ -1.81
VPS8-208ENST00000441141 ASAP1Q9ULH1 1129 aa3.72□□□□□ -1.81
VPS8-208ENST00000441141 PCDHB2Q9Y5E7 798 aa3.72□□□□□ -1.81
VPS8-208ENST00000441141 SIRT4Q9Y6E7 314 aaPredicted RBP3.72□□□□□ -1.81
VPS8-208ENST00000441141 TBC1D3DA0A087WVF3 549 aa3.71□□□□□ -1.82
VPS8-208ENST00000441141 TBC1D3IA0A087WXS9 549 aa3.71□□□□□ -1.82
VPS8-208ENST00000441141 TBC1D3EA0A087X179 549 aa3.71□□□□□ -1.82
VPS8-208ENST00000441141 TBC1D3KA0A087X1G2 549 aa3.71□□□□□ -1.82
VPS8-208ENST00000441141 CCDC187A0A096LP49 1063 aa3.71□□□□□ -1.82
VPS8-208ENST00000441141 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.71□□□□□ -1.82
VPS8-208ENST00000441141 TBC1D3BA6NDS4 549 aa3.71□□□□□ -1.82
VPS8-208ENST00000441141 TBC1D3FA6NER0 549 aaPredicted RBP3.71□□□□□ -1.82
VPS8-208ENST00000441141 TBC1D3LB9A6J9 549 aa3.71□□□□□ -1.82
VPS8-208ENST00000441141 SMIM22K7EJ46 135 aa3.71□□□□□ -1.82
VPS8-208ENST00000441141 FYB1O15117 783 aa3.71□□□□□ -1.82
VPS8-208ENST00000441141 NKX2-8O15522 239 aa3.71□□□□□ -1.82
VPS8-208ENST00000441141 SEPT4O43236 478 aa3.71□□□□□ -1.82
VPS8-208ENST00000441141 RPP40O75818 363 aaKnown RBP3.71□□□□□ -1.82
VPS8-208ENST00000441141 ALDOAP04075 364 aaKnown RBP3.71□□□□□ -1.82
VPS8-208ENST00000441141 TBC1D3HP0C7X1 549 aa3.71□□□□□ -1.82
VPS8-208ENST00000441141 DHRS4L1P0CG22 281 aa3.71□□□□□ -1.82
VPS8-208ENST00000441141 CERS1P27544 350 aa3.71□□□□□ -1.82
VPS8-208ENST00000441141 CST5P28325 142 aaPredicted RBP3.71□□□□□ -1.82
VPS8-208ENST00000441141 GRK5P34947 590 aa3.71□□□□□ -1.82
VPS8-208ENST00000441141 PCP4P48539 62 aa3.71□□□□□ -1.82
VPS8-208ENST00000441141 AARSP49588 968 aaKnown RBP eCLIP3.71□□□□□ -1.82
VPS8-208ENST00000441141 PPFIA1Q13136 1202 aa3.71□□□□□ -1.82
VPS8-208ENST00000441141 BIRC3Q13489 604 aa3.71□□□□□ -1.82
VPS8-208ENST00000441141 RAPGEF1Q13905 1077 aa3.71□□□□□ -1.82
VPS8-208ENST00000441141 FAM110CQ1W6H9 321 aa3.71□□□□□ -1.82
VPS8-208ENST00000441141 INO80DQ53TQ3 878 aaPredicted RBP3.71□□□□□ -1.82
VPS8-208ENST00000441141 HSP90AB4PQ58FF6 505 aa3.71□□□□□ -1.82
VPS8-208ENST00000441141 ANKRD40Q6AI12 368 aa3.71□□□□□ -1.82
VPS8-208ENST00000441141 TBC1D3GQ6DHY5 549 aa3.71□□□□□ -1.82
VPS8-208ENST00000441141 SULT6B1Q6IMI4 303 aa3.71□□□□□ -1.82
VPS8-208ENST00000441141 TBC1D3CQ6IPX1 549 aa3.71□□□□□ -1.82
VPS8-208ENST00000441141 CRELD2Q6UXH1 353 aaPredicted RBP3.71□□□□□ -1.82
VPS8-208ENST00000441141 RANBP10Q6VN20 620 aa3.71□□□□□ -1.82
VPS8-208ENST00000441141 UEVLDQ8IX04 471 aa3.71□□□□□ -1.82
VPS8-208ENST00000441141 TBC1D3Q8IZP1 549 aaPredicted RBP3.71□□□□□ -1.82
VPS8-208ENST00000441141 CPXCR1Q8N123 301 aa3.71□□□□□ -1.82
VPS8-208ENST00000441141 PNLDC1Q8NA58 520 aaKnown RBP3.71□□□□□ -1.82
VPS8-208ENST00000441141 STT3BQ8TCJ2 826 aa3.71□□□□□ -1.82
VPS8-208ENST00000441141 PPM1EQ8WY54 764 aa3.71□□□□□ -1.82
VPS8-208ENST00000441141 C3orf49Q96BT1 292 aa3.71□□□□□ -1.82
VPS8-208ENST00000441141 REPS1Q96D71 796 aa3.71□□□□□ -1.82
VPS8-208ENST00000441141 TRAPPC9Q96Q05 1148 aa3.71□□□□□ -1.82
VPS8-208ENST00000441141 SENP7Q9BQF6 1050 aa3.71□□□□□ -1.82
VPS8-208ENST00000441141 POLR3GLQ9BT43 218 aa3.71□□□□□ -1.82
VPS8-208ENST00000441141 SORBS1Q9BX66 1292 aaKnown RBP3.71□□□□□ -1.82
VPS8-208ENST00000441141 SEMA4CQ9C0C4 833 aa3.71□□□□□ -1.82
VPS8-208ENST00000441141 PABPC3Q9H361 631 aaKnown RBP3.71□□□□□ -1.82
VPS8-208ENST00000441141 TAF1DQ9H5J8 278 aaPredicted RBP3.71□□□□□ -1.82
VPS8-208ENST00000441141 CDCP1Q9H5V8 836 aa3.71□□□□□ -1.82
VPS8-208ENST00000441141 SAP30LQ9HAJ7 183 aa3.71□□□□□ -1.82
VPS8-208ENST00000441141 ABHD10Q9NUJ1 306 aa3.71□□□□□ -1.82
VPS8-208ENST00000441141 ARL8BQ9NVJ2 186 aa3.71□□□□□ -1.82
VPS8-208ENST00000441141 GRHPRQ9UBQ7 328 aa3.71□□□□□ -1.82
VPS8-208ENST00000441141 ADAM21Q9UKJ8 722 aa3.71□□□□□ -1.82
VPS8-208ENST00000441141 VPS4AQ9UN37 437 aa3.71□□□□□ -1.82
VPS8-208ENST00000441141 SCAF8Q9UPN6 1271 aaKnown RBP3.71□□□□□ -1.82
VPS8-208ENST00000441141 CNTN6Q9UQ52 1028 aa3.71□□□□□ -1.82
VPS8-208ENST00000441141 ZBTB1Q9Y2K1 713 aa3.71□□□□□ -1.82
VPS8-208ENST00000441141 HEMK1Q9Y5R4 338 aaPredicted RBP3.71□□□□□ -1.82
VPS8-208ENST00000441141 MBD3L5A6NJ08 208 aaPredicted RBP3.7□□□□□ -1.82
VPS8-208ENST00000441141 HNRNPRO43390 633 aaKnown RBP3.7□□□□□ -1.82
VPS8-208ENST00000441141 PRAMEF2O60811 474 aa3.7□□□□□ -1.82
VPS8-208ENST00000441141 PPP6R2O75170 966 aa3.7□□□□□ -1.82
VPS8-208ENST00000441141 ALADP13716 330 aa3.7□□□□□ -1.82
VPS8-208ENST00000441141 TACR3P29371 465 aa3.7□□□□□ -1.82
VPS8-208ENST00000441141 SERPINA4P29622 427 aa3.7□□□□□ -1.82
VPS8-208ENST00000441141 PAPOLAP51003 745 aaKnown RBP3.7□□□□□ -1.82
VPS8-208ENST00000441141 RAE1P78406 368 aaKnown RBP3.7□□□□□ -1.82
VPS8-208ENST00000441141 FHL1Q13642 323 aa3.7□□□□□ -1.82
VPS8-208ENST00000441141 ETFDHQ16134 617 aa3.7□□□□□ -1.82
VPS8-208ENST00000441141 TIGD6Q17RP2 521 aa3.7□□□□□ -1.82
VPS8-208ENST00000441141 AAK1Q2M2I8 961 aa3.7□□□□□ -1.82
VPS8-208ENST00000441141 BTBD16Q32M84 506 aa3.7□□□□□ -1.82
VPS8-208ENST00000441141 TUBB8Q3ZCM7 444 aa3.7□□□□□ -1.82
VPS8-208ENST00000441141 KLHL22Q53GT1 634 aa3.7□□□□□ -1.82
VPS8-208ENST00000441141 DGAT2L7PQ6IED9 249 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms