RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 LSSP48449 732 aa11.72□□□□□ -0.53
CSTF3-203ENST00000438862 SLC5A3P53794 718 aa11.72□□□□□ -0.53
CSTF3-203ENST00000438862 ARID5AQ03989 594 aa11.72□□□□□ -0.53
CSTF3-203ENST00000438862 NFATC3Q12968 1075 aa11.72□□□□□ -0.53
CSTF3-203ENST00000438862 DHX8Q14562 1220 aaKnown RBP11.72□□□□□ -0.53
CSTF3-203ENST00000438862 ANKS1BQ7Z6G8 1248 aa11.72□□□□□ -0.53
CSTF3-203ENST00000438862 OXR1Q8N573 874 aa11.72□□□□□ -0.53
CSTF3-203ENST00000438862 BHMTQ93088 406 aa11.72□□□□□ -0.53
CSTF3-203ENST00000438862 CCDC97Q96F63 343 aaPredicted RBP11.72□□□□□ -0.53
CSTF3-203ENST00000438862 PIWIL1Q96J94 861 aaKnown RBP11.72□□□□□ -0.53
CSTF3-203ENST00000438862 KCNK16Q96T55 309 aa11.72□□□□□ -0.53
CSTF3-203ENST00000438862 B3GNT5Q9BYG0 378 aa11.72□□□□□ -0.53
CSTF3-203ENST00000438862 FBXO44Q9H4M3 255 aa11.72□□□□□ -0.53
CSTF3-203ENST00000438862 PDE11AQ9HCR9 933 aa11.72□□□□□ -0.53
CSTF3-203ENST00000438862 THSD1Q9NS62 852 aa11.72□□□□□ -0.53
CSTF3-203ENST00000438862 INTS13Q9NVM9 706 aa11.72□□□□□ -0.53
CSTF3-203ENST00000438862 CLDN5O00501 218 aa11.71□□□□□ -0.53
CSTF3-203ENST00000438862 TBX18O95935 607 aa11.71□□□□□ -0.53
CSTF3-203ENST00000438862 F13A1P00488 732 aa11.71□□□□□ -0.53
CSTF3-203ENST00000438862 AFPP02771 609 aaKnown RBP11.71□□□□□ -0.53
CSTF3-203ENST00000438862 DNTTP04053 509 aa11.71□□□□□ -0.53
CSTF3-203ENST00000438862 IGHV4-34P06331 123 aa11.71□□□□□ -0.53
CSTF3-203ENST00000438862 CD38P28907 300 aa11.71□□□□□ -0.53
CSTF3-203ENST00000438862 GCGRP47871 477 aa11.71□□□□□ -0.53
CSTF3-203ENST00000438862 RXRGP48443 463 aa11.71□□□□□ -0.53
CSTF3-203ENST00000438862 GABREP78334 506 aa11.71□□□□□ -0.53
CSTF3-203ENST00000438862 ASIC1P78348 528 aa11.71□□□□□ -0.53
CSTF3-203ENST00000438862 SERINC3Q13530 473 aa11.71□□□□□ -0.53
CSTF3-203ENST00000438862 SURF1Q15526 300 aa11.71□□□□□ -0.53
CSTF3-203ENST00000438862 DUOXA2Q1HG44 320 aa11.71□□□□□ -0.53
CSTF3-203ENST00000438862 TTC31Q49AM3 519 aaPredicted RBP11.71□□□□□ -0.53
CSTF3-203ENST00000438862 RILPL1Q5EBL4 403 aa11.71□□□□□ -0.53
CSTF3-203ENST00000438862 SFMBT2Q5VUG0 894 aa11.71□□□□□ -0.53
CSTF3-203ENST00000438862 FYB2Q5VWT5 728 aa11.71□□□□□ -0.53
CSTF3-203ENST00000438862 KIAA1614Q5VZ46 1190 aa11.71□□□□□ -0.53
CSTF3-203ENST00000438862 KIAA0895LQ68EN5 471 aa11.71□□□□□ -0.53
CSTF3-203ENST00000438862 RBBP8NLQ8NC74 664 aaPredicted RBP11.71□□□□□ -0.53
CSTF3-203ENST00000438862 B3GALNT2Q8NCR0 500 aa11.71□□□□□ -0.53
CSTF3-203ENST00000438862 SAAL1Q96ER3 474 aa11.71□□□□□ -0.53
CSTF3-203ENST00000438862 CALML4Q96GE6 196 aa11.71□□□□□ -0.53
CSTF3-203ENST00000438862 MRPL45Q9BRJ2 306 aaKnown RBP11.71□□□□□ -0.53
CSTF3-203ENST00000438862 SLC2A11Q9BYW1 496 aa11.71□□□□□ -0.53
CSTF3-203ENST00000438862 CIPCQ9C0C6 399 aa11.71□□□□□ -0.53
CSTF3-203ENST00000438862 ERVMER34-1Q9H9K5 563 aa11.71□□□□□ -0.53
CSTF3-203ENST00000438862 POLR1BQ9H9Y6 1135 aa11.71□□□□□ -0.53
CSTF3-203ENST00000438862 DMAP1Q9NPF5 467 aaPredicted RBP11.71□□□□□ -0.53
CSTF3-203ENST00000438862 CYLDQ9NQC7 956 aa11.71□□□□□ -0.53
CSTF3-203ENST00000438862 SEPT3Q9UH03 358 aa11.71□□□□□ -0.53
CSTF3-203ENST00000438862 NCKAP1Q9Y2A7 1128 aa11.71□□□□□ -0.53
CSTF3-203ENST00000438862 PLXNA2O75051 1894 aa11.7□□□□□ -0.54
CSTF3-203ENST00000438862 AHCTF1Q8WYP5 2266 aa11.7□□□□□ -0.54
CSTF3-203ENST00000438862 VWA3AA6NCI4 1184 aa11.7□□□□□ -0.54
CSTF3-203ENST00000438862 PRPF6O94906 941 aaKnown RBP11.7□□□□□ -0.54
CSTF3-203ENST00000438862 MPOP05164 745 aa11.7□□□□□ -0.54
CSTF3-203ENST00000438862 PDE4CQ08493 712 aa11.7□□□□□ -0.54
CSTF3-203ENST00000438862 SFSWAPQ12872 951 aaKnown RBP11.7□□□□□ -0.54
CSTF3-203ENST00000438862 BNIP3Q12983 259 aa11.7□□□□□ -0.54
CSTF3-203ENST00000438862 UBAP2LQ14157 1087 aaKnown RBP11.7□□□□□ -0.54
CSTF3-203ENST00000438862 MCTP1Q6DN14 999 aa11.7□□□□□ -0.54
CSTF3-203ENST00000438862 KLHDC10Q6PID8 442 aa11.7□□□□□ -0.54
CSTF3-203ENST00000438862 BRICD5Q6PL45 260 aa11.7□□□□□ -0.54
CSTF3-203ENST00000438862 CCDC81Q6ZN84 652 aa11.7□□□□□ -0.54
CSTF3-203ENST00000438862 ZSWIM2Q8NEG5 633 aa11.7□□□□□ -0.54
CSTF3-203ENST00000438862 GOLGA1Q92805 767 aa11.7□□□□□ -0.54
CSTF3-203ENST00000438862 AK8Q96MA6 479 aa11.7□□□□□ -0.54
CSTF3-203ENST00000438862 SLC6A18Q96N87 628 aa11.7□□□□□ -0.54
CSTF3-203ENST00000438862 ACCSQ96QU6 501 aa11.7□□□□□ -0.54
CSTF3-203ENST00000438862 STRA6Q9BX79 667 aa11.7□□□□□ -0.54
CSTF3-203ENST00000438862 IKZF4Q9H2S9 585 aa11.7□□□□□ -0.54
CSTF3-203ENST00000438862 SCML1Q9UN30 329 aa11.7□□□□□ -0.54
CSTF3-203ENST00000438862 PLA2G4CQ9UP65 541 aa11.7□□□□□ -0.54
CSTF3-203ENST00000438862 ZDHHC9Q9Y397 364 aa11.7□□□□□ -0.54
CSTF3-203ENST00000438862 NME7Q9Y5B8 376 aa11.7□□□□□ -0.54
CSTF3-203ENST00000438862 PCDHB1Q9Y5F3 818 aa11.7□□□□□ -0.54
CSTF3-203ENST00000438862 ARID1BQ8NFD5 2236 aaPredicted RBP11.7□□□□□ -0.54
CSTF3-203ENST00000438862 A8MXQ7 604 aa11.69□□□□□ -0.54
CSTF3-203ENST00000438862 SUV39H1O43463 412 aa11.69□□□□□ -0.54
CSTF3-203ENST00000438862 USP12O75317 370 aa11.69□□□□□ -0.54
CSTF3-203ENST00000438862 WNT1P04628 370 aa11.69□□□□□ -0.54
CSTF3-203ENST00000438862 CYBBP04839 570 aa11.69□□□□□ -0.54
CSTF3-203ENST00000438862 KRT10P13645 584 aa11.69□□□□□ -0.54
CSTF3-203ENST00000438862 UBA7P41226 1012 aa11.69□□□□□ -0.54
CSTF3-203ENST00000438862 INHBCP55103 352 aa11.69□□□□□ -0.54
CSTF3-203ENST00000438862 RPS14P62263 151 aaKnown RBP11.69□□□□□ -0.54
CSTF3-203ENST00000438862 SGO2Q562F6 1265 aa11.69□□□□□ -0.54
CSTF3-203ENST00000438862 SLC45A4Q5BKX6 768 aa11.69□□□□□ -0.54
CSTF3-203ENST00000438862 ARL6IP4Q66PJ3 421 aaKnown RBP11.69□□□□□ -0.54
CSTF3-203ENST00000438862 IGF2-ASQ6U949 168 aa11.69□□□□□ -0.54
CSTF3-203ENST00000438862 USP30Q70CQ3 517 aa11.69□□□□□ -0.54
CSTF3-203ENST00000438862 EXD3Q8N9H8 876 aa11.69□□□□□ -0.54
CSTF3-203ENST00000438862 SMARCD1Q96GM5 515 aa11.69□□□□□ -0.54
CSTF3-203ENST00000438862 VCPIP1Q96JH7 1222 aa11.69□□□□□ -0.54
CSTF3-203ENST00000438862 FAM84AQ96KN4 292 aa11.69□□□□□ -0.54
CSTF3-203ENST00000438862 DEPDC7Q96QD5 511 aa11.69□□□□□ -0.54
CSTF3-203ENST00000438862 MED10Q9BTT4 135 aa11.69□□□□□ -0.54
CSTF3-203ENST00000438862 TMEM245Q9H330 911 aa11.69□□□□□ -0.54
CSTF3-203ENST00000438862 DPEP3Q9H4B8 488 aa11.69□□□□□ -0.54
CSTF3-203ENST00000438862 ASCL3Q9NQ33 180 aa11.69□□□□□ -0.54
CSTF3-203ENST00000438862 AASDHPPTQ9NRN7 309 aa11.69□□□□□ -0.54
CSTF3-203ENST00000438862 STARD5Q9NSY2 213 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms