RNA–Protein interactions for RNA: ENST00000433972.1

RPUSD3-208, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-208ENST00000433972 MPP7Q5T2T1 576 aa15.51■□□□□ 0.07
RPUSD3-208ENST00000433972 LCLAT1Q6UWP7 414 aa15.51■□□□□ 0.07
RPUSD3-208ENST00000433972 OR2T3Q8NH03 318 aa15.51■□□□□ 0.07
RPUSD3-208ENST00000433972 ERLEC1Q96DZ1 483 aa15.51■□□□□ 0.07
RPUSD3-208ENST00000433972 DDX50Q9BQ39 737 aaKnown RBP15.51■□□□□ 0.07
RPUSD3-208ENST00000433972 TRIM62Q9BVG3 475 aa15.51■□□□□ 0.07
RPUSD3-208ENST00000433972 GPR174Q9BXC1 333 aa15.51■□□□□ 0.07
RPUSD3-208ENST00000433972 YJEFN3A6XGL0 299 aa15.5■□□□□ 0.07
RPUSD3-208ENST00000433972 E7ENQ6 273 aa15.5■□□□□ 0.07
RPUSD3-208ENST00000433972 SART1O43290 800 aaKnown RBP15.5■□□□□ 0.07
RPUSD3-208ENST00000433972 FBXO21O94952 628 aa15.5■□□□□ 0.07
RPUSD3-208ENST00000433972 LETM1O95202 739 aaPredicted RBP15.5■□□□□ 0.07
RPUSD3-208ENST00000433972 CER1O95813 267 aa15.5■□□□□ 0.07
RPUSD3-208ENST00000433972 FMO5P49326 533 aa15.5■□□□□ 0.07
RPUSD3-208ENST00000433972 DAOAP59103 153 aa15.5■□□□□ 0.07
RPUSD3-208ENST00000433972 SFSWAPQ12872 951 aaKnown RBP15.5■□□□□ 0.07
RPUSD3-208ENST00000433972 GRIK2Q13002 908 aa15.5■□□□□ 0.07
RPUSD3-208ENST00000433972 CNGA2Q16280 664 aa15.5■□□□□ 0.07
RPUSD3-208ENST00000433972 FNDC3BQ53EP0 1204 aaKnown RBP15.5■□□□□ 0.07
RPUSD3-208ENST00000433972 MSANTD2Q6P1R3 559 aa15.5■□□□□ 0.07
RPUSD3-208ENST00000433972 TMEM270Q6UE05 265 aa15.5■□□□□ 0.07
RPUSD3-208ENST00000433972 BHLHA9Q7RTU4 235 aa15.5■□□□□ 0.07
RPUSD3-208ENST00000433972 CCDC117Q8IWD4 279 aaPredicted RBP15.5■□□□□ 0.07
RPUSD3-208ENST00000433972 PPM1KQ8N3J5 372 aa15.5■□□□□ 0.07
RPUSD3-208ENST00000433972 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.5■□□□□ 0.07
RPUSD3-208ENST00000433972 UBA3Q8TBC4 463 aa15.5■□□□□ 0.07
RPUSD3-208ENST00000433972 EDEM1Q92611 657 aa15.5■□□□□ 0.07
RPUSD3-208ENST00000433972 HSFY1Q96LI6 401 aa15.5■□□□□ 0.07
RPUSD3-208ENST00000433972 MIR1-1HGQ9H1L0 117 aa15.5■□□□□ 0.07
RPUSD3-208ENST00000433972 FSCN3Q9NQT6 498 aa15.5■□□□□ 0.07
RPUSD3-208ENST00000433972 ZMIZ1Q9ULJ6 1067 aa15.5■□□□□ 0.07
RPUSD3-208ENST00000433972 MSRB2Q9Y3D2 182 aa15.5■□□□□ 0.07
RPUSD3-208ENST00000433972 PCDHB4Q9Y5E5 795 aa15.5■□□□□ 0.07
RPUSD3-208ENST00000433972 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.5■□□□□ 0.07
RPUSD3-208ENST00000433972 MYOFQ9NZM1 2061 aa15.5■□□□□ 0.07
RPUSD3-208ENST00000433972 MYH10P35580 1976 aa15.49■□□□□ 0.07
RPUSD3-208ENST00000433972 SPAARA0A1B0GVQ0 90 aa15.49■□□□□ 0.07
RPUSD3-208ENST00000433972 METTL12A8MUP2 240 aa15.49■□□□□ 0.07
RPUSD3-208ENST00000433972 TULP2O00295 520 aa15.49■□□□□ 0.07
RPUSD3-208ENST00000433972 BCAT2O15382 392 aaPredicted RBP15.49■□□□□ 0.07
RPUSD3-208ENST00000433972 LCP1P13796 627 aa15.49■□□□□ 0.07
RPUSD3-208ENST00000433972 CD59P13987 128 aa15.49■□□□□ 0.07
RPUSD3-208ENST00000433972 PRKCSHP14314 528 aaPredicted RBP15.49■□□□□ 0.07
RPUSD3-208ENST00000433972 PRKCHP24723 683 aa15.49■□□□□ 0.07
RPUSD3-208ENST00000433972 COPAP53621 1224 aa15.49■□□□□ 0.07
RPUSD3-208ENST00000433972 MARSP56192 900 aaKnown RBP15.49■□□□□ 0.07
RPUSD3-208ENST00000433972 RING1Q06587 406 aa15.49■□□□□ 0.07
RPUSD3-208ENST00000433972 LRMPQ12912 555 aa15.49■□□□□ 0.07
RPUSD3-208ENST00000433972 CAMK2GQ13555 558 aaPredicted RBP15.49■□□□□ 0.07
RPUSD3-208ENST00000433972 DPCR1Q3MIW9 517 aa15.49■□□□□ 0.07
RPUSD3-208ENST00000433972 TTC31Q49AM3 519 aaPredicted RBP15.49■□□□□ 0.07
RPUSD3-208ENST00000433972 DCAF12L1Q5VU92 463 aa15.49■□□□□ 0.07
RPUSD3-208ENST00000433972 RBM43Q6ZSC3 357 aaKnown RBP15.49■□□□□ 0.07
RPUSD3-208ENST00000433972 CHST9Q7L1S5 443 aa15.49■□□□□ 0.07
RPUSD3-208ENST00000433972 GATA6Q92908 595 aa15.49■□□□□ 0.07
RPUSD3-208ENST00000433972 AZIN2Q96A70 460 aa15.49■□□□□ 0.07
RPUSD3-208ENST00000433972 LHX5Q9H2C1 402 aa15.49■□□□□ 0.07
RPUSD3-208ENST00000433972 THAP9Q9H5L6 903 aa15.49■□□□□ 0.07
RPUSD3-208ENST00000433972 CD93Q9NPY3 652 aa15.49■□□□□ 0.07
RPUSD3-208ENST00000433972 SUN2Q9UH99 717 aa15.49■□□□□ 0.07
RPUSD3-208ENST00000433972 SFMBT1Q9UHJ3 866 aa15.49■□□□□ 0.07
RPUSD3-208ENST00000433972 GGA2Q9UJY4 613 aa15.49■□□□□ 0.07
RPUSD3-208ENST00000433972 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.49■□□□□ 0.07
RPUSD3-208ENST00000433972 TNRC6BQ9UPQ9 1833 aaKnown RBP15.49■□□□□ 0.07
RPUSD3-208ENST00000433972 MAP1BP46821 2468 aaKnown RBP15.49■□□□□ 0.07
RPUSD3-208ENST00000433972 M0QYV0 167 aa15.48■□□□□ 0.07
RPUSD3-208ENST00000433972 HYAL3O43820 417 aaPredicted RBP15.48■□□□□ 0.07
RPUSD3-208ENST00000433972 TSPAN3O60637 253 aa15.48■□□□□ 0.07
RPUSD3-208ENST00000433972 AFPP02771 609 aaKnown RBP15.48■□□□□ 0.07
RPUSD3-208ENST00000433972 LTFP02788 710 aa15.48■□□□□ 0.07
RPUSD3-208ENST00000433972 DNTTP04053 509 aa15.48■□□□□ 0.07
RPUSD3-208ENST00000433972 DLDP09622 509 aaKnown RBP15.48■□□□□ 0.07
RPUSD3-208ENST00000433972 ZNF883P0CG24 379 aa15.48■□□□□ 0.07
RPUSD3-208ENST00000433972 PABPC1P11940 636 aaKnown RBP15.48■□□□□ 0.07
RPUSD3-208ENST00000433972 POLR2EP19388 210 aaKnown RBP15.48■□□□□ 0.07
RPUSD3-208ENST00000433972 SPINK2P20155 84 aa15.48■□□□□ 0.07
RPUSD3-208ENST00000433972 HLA-FP30511 346 aa15.48■□□□□ 0.07
RPUSD3-208ENST00000433972 MATKP42679 507 aa15.48■□□□□ 0.07
RPUSD3-208ENST00000433972 ST8SIA6P61647 398 aa15.48■□□□□ 0.07
RPUSD3-208ENST00000433972 GCNT1Q02742 428 aa15.48■□□□□ 0.07
RPUSD3-208ENST00000433972 TEAD4Q15561 434 aa15.48■□□□□ 0.07
RPUSD3-208ENST00000433972 TRIP6Q15654 476 aaKnown RBP15.48■□□□□ 0.07
RPUSD3-208ENST00000433972 STX1AQ16623 288 aa15.48■□□□□ 0.07
RPUSD3-208ENST00000433972 SKOR2Q2VWA4 1001 aaPredicted RBP15.48■□□□□ 0.07
RPUSD3-208ENST00000433972 PKDCCQ504Y2 493 aa15.48■□□□□ 0.07
RPUSD3-208ENST00000433972 NAXDQ8IW45 347 aa15.48■□□□□ 0.07
RPUSD3-208ENST00000433972 ZCCHC9Q8N567 271 aaKnown RBP15.48■□□□□ 0.07
RPUSD3-208ENST00000433972 UBR7Q8N806 425 aa15.48■□□□□ 0.07
RPUSD3-208ENST00000433972 RBBP8NLQ8NC74 664 aaPredicted RBP15.48■□□□□ 0.07
RPUSD3-208ENST00000433972 SLC35F5Q8WV83 523 aa15.48■□□□□ 0.07
RPUSD3-208ENST00000433972 P2RY11Q96G91 374 aa15.48■□□□□ 0.07
RPUSD3-208ENST00000433972 SERPINB11Q96P15 392 aa15.48■□□□□ 0.07
RPUSD3-208ENST00000433972 NAT10Q9H0A0 1025 aaKnown RBP15.48■□□□□ 0.07
RPUSD3-208ENST00000433972 ABCB8Q9NUT2 735 aa15.48■□□□□ 0.07
RPUSD3-208ENST00000433972 CLEC4EQ9ULY5 219 aa15.48■□□□□ 0.07
RPUSD3-208ENST00000433972 APOBEC2Q9Y235 224 aaKnown RBP15.48■□□□□ 0.07
RPUSD3-208ENST00000433972 CEP295Q9C0D2 2601 aa15.47■□□□□ 0.07
RPUSD3-208ENST00000433972 KCNJ18B7U540 433 aa15.47■□□□□ 0.07
RPUSD3-208ENST00000433972 SH3BP5O60239 455 aa15.47■□□□□ 0.07
RPUSD3-208ENST00000433972 GJB3O75712 270 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms