RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 TRIM2Q9C040 744 aa6.62□□□□□ -1.35
USP54-206ENST00000433394 CDCP1Q9H5V8 836 aa6.62□□□□□ -1.35
USP54-206ENST00000433394 OLA1Q9NTK5 396 aaKnown RBP6.62□□□□□ -1.35
USP54-206ENST00000433394 SERTAD4Q9NUC0 356 aa6.62□□□□□ -1.35
USP54-206ENST00000433394 ALKBH4Q9NXW9 302 aa6.62□□□□□ -1.35
USP54-206ENST00000433394 SCINQ9Y6U3 715 aa6.62□□□□□ -1.35
USP54-206ENST00000433394 MAST3O60307 1309 aa6.61□□□□□ -1.35
USP54-206ENST00000433394 M0QYT0 321 aa6.61□□□□□ -1.35
USP54-206ENST00000433394 FOXD2O60548 495 aaPredicted RBP6.61□□□□□ -1.35
USP54-206ENST00000433394 CYP3A4P08684 503 aa6.61□□□□□ -1.35
USP54-206ENST00000433394 GPD2P43304 727 aa6.61□□□□□ -1.35
USP54-206ENST00000433394 DIO1P49895 249 aa6.61□□□□□ -1.35
USP54-206ENST00000433394 CCT8P50990 548 aa6.61□□□□□ -1.35
USP54-206ENST00000433394 EIF5P55010 431 aaKnown RBP6.61□□□□□ -1.35
USP54-206ENST00000433394 TAS2R50P59544 299 aa6.61□□□□□ -1.35
USP54-206ENST00000433394 DEUP1Q05D60 604 aa6.61□□□□□ -1.35
USP54-206ENST00000433394 FOXE3Q13461 319 aa6.61□□□□□ -1.35
USP54-206ENST00000433394 DCTN1Q14203 1278 aa6.61□□□□□ -1.35
USP54-206ENST00000433394 CNGA3Q16281 694 aa6.61□□□□□ -1.35
USP54-206ENST00000433394 CBWD5Q5RIA9 395 aa6.61□□□□□ -1.35
USP54-206ENST00000433394 KIAA0895LQ68EN5 471 aa6.61□□□□□ -1.35
USP54-206ENST00000433394 KIRREL2Q6UWL6 708 aa6.61□□□□□ -1.35
USP54-206ENST00000433394 RHOUQ7L0Q8 258 aa6.61□□□□□ -1.35
USP54-206ENST00000433394 SLC29A4Q7RTT9 530 aa6.61□□□□□ -1.35
USP54-206ENST00000433394 MRGPREQ86SM8 312 aa6.61□□□□□ -1.35
USP54-206ENST00000433394 ARMC8Q8IUR7 673 aa6.61□□□□□ -1.35
USP54-206ENST00000433394 ARRDC3Q96B67 414 aa6.61□□□□□ -1.35
USP54-206ENST00000433394 CD180Q99467 661 aa6.61□□□□□ -1.35
USP54-206ENST00000433394 HTATIP2Q9BUP3 242 aa6.61□□□□□ -1.35
USP54-206ENST00000433394 FSD1LQ9BXM9 530 aa6.61□□□□□ -1.35
USP54-206ENST00000433394 ZNF341Q9BYN7 854 aa6.61□□□□□ -1.35
USP54-206ENST00000433394 PAIP1Q9H074 479 aaKnown RBP6.61□□□□□ -1.35
USP54-206ENST00000433394 SAP30LQ9HAJ7 183 aa6.61□□□□□ -1.35
USP54-206ENST00000433394 ENTPD2Q9Y5L3 495 aa6.61□□□□□ -1.35
USP54-206ENST00000433394 VWC2LB2RUY7 222 aa6.6□□□□□ -1.35
USP54-206ENST00000433394 B4E171 279 aa6.6□□□□□ -1.35
USP54-206ENST00000433394 TISP43B9A030 160 aa6.6□□□□□ -1.35
USP54-206ENST00000433394 PLSCR1O15162 318 aa6.6□□□□□ -1.35
USP54-206ENST00000433394 SUV39H1O43463 412 aa6.6□□□□□ -1.35
USP54-206ENST00000433394 HEXIM1O94992 359 aaKnown RBP6.6□□□□□ -1.35
USP54-206ENST00000433394 CD4P01730 458 aa6.6□□□□□ -1.35
USP54-206ENST00000433394 CHN1P15882 459 aa6.6□□□□□ -1.35
USP54-206ENST00000433394 TGM1P22735 817 aa6.6□□□□□ -1.35
USP54-206ENST00000433394 TSPAN7P41732 249 aa6.6□□□□□ -1.35
USP54-206ENST00000433394 COPB1P53618 953 aaKnown RBP6.6□□□□□ -1.35
USP54-206ENST00000433394 RPP30P78346 268 aaKnown RBP6.6□□□□□ -1.35
USP54-206ENST00000433394 LMAN2Q12907 356 aa6.6□□□□□ -1.35
USP54-206ENST00000433394 THOC5Q13769 683 aaKnown RBP6.6□□□□□ -1.35
USP54-206ENST00000433394 NFIL3Q16649 462 aa6.6□□□□□ -1.35
USP54-206ENST00000433394 ACAD10Q6JQN1 1059 aa6.6□□□□□ -1.35
USP54-206ENST00000433394 GRASPQ7Z6J2 395 aaPredicted RBP6.6□□□□□ -1.35
USP54-206ENST00000433394 PEG10Q86TG7 708 aaKnown RBP6.6□□□□□ -1.35
USP54-206ENST00000433394 C16orf71Q8IYS4 520 aaPredicted RBP6.6□□□□□ -1.35
USP54-206ENST00000433394 RFFLQ8WZ73 363 aa6.6□□□□□ -1.35
USP54-206ENST00000433394 TBC1D5Q92609 795 aa6.6□□□□□ -1.35
USP54-206ENST00000433394 ZUFSPQ96AP4 578 aa6.6□□□□□ -1.35
USP54-206ENST00000433394 TIGD1Q96MW7 591 aa6.6□□□□□ -1.35
USP54-206ENST00000433394 ACAD9Q9H845 621 aa6.6□□□□□ -1.35
USP54-206ENST00000433394 RMI1Q9H9A7 625 aa6.6□□□□□ -1.35
USP54-206ENST00000433394 VEZTQ9HBM0 779 aa6.6□□□□□ -1.35
USP54-206ENST00000433394 DLL3Q9NYJ7 618 aa6.6□□□□□ -1.35
USP54-206ENST00000433394 ASAP1Q9ULH1 1129 aa6.6□□□□□ -1.35
USP54-206ENST00000433394 RTN3O95197 1032 aaPredicted RBP6.59□□□□□ -1.35
USP54-206ENST00000433394 ESRRBO95718 433 aa6.59□□□□□ -1.35
USP54-206ENST00000433394 ADH4P08319 380 aa6.59□□□□□ -1.35
USP54-206ENST00000433394 GALNSP34059 522 aa6.59□□□□□ -1.35
USP54-206ENST00000433394 TUBP50607 506 aa6.59□□□□□ -1.35
USP54-206ENST00000433394 CASP6P55212 293 aa6.59□□□□□ -1.35
USP54-206ENST00000433394 RAE1P78406 368 aaKnown RBP6.59□□□□□ -1.35
USP54-206ENST00000433394 CFHR3Q02985 330 aa6.59□□□□□ -1.35
USP54-206ENST00000433394 ALKBH1Q13686 389 aaKnown RBP6.59□□□□□ -1.35
USP54-206ENST00000433394 VSTM1Q6UX27 236 aa6.59□□□□□ -1.35
USP54-206ENST00000433394 C16orf89Q6UX73 402 aa6.59□□□□□ -1.35
USP54-206ENST00000433394 ENDOVQ8N8Q3 282 aaKnown RBP6.59□□□□□ -1.35
USP54-206ENST00000433394 LINS1Q8NG48 757 aa6.59□□□□□ -1.35
USP54-206ENST00000433394 AKAP1Q92667 903 aaKnown RBP eCLIP6.59□□□□□ -1.35
USP54-206ENST00000433394 ZBTB10Q96DT7 871 aa6.59□□□□□ -1.35
USP54-206ENST00000433394 DAZAP1Q96EP5 407 aaKnown RBP6.59□□□□□ -1.35
USP54-206ENST00000433394 RNF125Q96EQ8 232 aa6.59□□□□□ -1.35
USP54-206ENST00000433394 C20orf173Q96LM9 149 aa6.59□□□□□ -1.35
USP54-206ENST00000433394 C7orf26Q96N11 449 aa6.59□□□□□ -1.35
USP54-206ENST00000433394 SNX18Q96RF0 628 aa6.59□□□□□ -1.35
USP54-206ENST00000433394 KRTAP4-9Q9BYQ8 210 aa6.59□□□□□ -1.35
USP54-206ENST00000433394 CLPBQ9H078 707 aa6.59□□□□□ -1.35
USP54-206ENST00000433394 SFXN1Q9H9B4 322 aa6.59□□□□□ -1.35
USP54-206ENST00000433394 ABHD10Q9NUJ1 306 aa6.59□□□□□ -1.35
USP54-206ENST00000433394 SLC25A13Q9UJS0 675 aa6.59□□□□□ -1.35
USP54-206ENST00000433394 MAFFQ9ULX9 164 aa6.59□□□□□ -1.35
USP54-206ENST00000433394 H0YIZ8 118 aa6.58□□□□□ -1.36
USP54-206ENST00000433394 TULP3O75386 442 aa6.58□□□□□ -1.36
USP54-206ENST00000433394 TBX18O95935 607 aa6.58□□□□□ -1.36
USP54-206ENST00000433394 ATP1A3P13637 1013 aa6.58□□□□□ -1.36
USP54-206ENST00000433394 BDNFP23560 247 aa6.58□□□□□ -1.36
USP54-206ENST00000433394 RXRGP48443 463 aa6.58□□□□□ -1.36
USP54-206ENST00000433394 OAZ1P54368 228 aa6.58□□□□□ -1.36
USP54-206ENST00000433394 WDR5P61964 334 aaKnown RBP6.58□□□□□ -1.36
USP54-206ENST00000433394 GPC5P78333 572 aa6.58□□□□□ -1.36
USP54-206ENST00000433394 BAK1Q16611 211 aa6.58□□□□□ -1.36
USP54-206ENST00000433394 MIIPQ5JXC2 388 aa6.58□□□□□ -1.36
USP54-206ENST00000433394 MZT2BQ6NZ67 158 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms