RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 CCDC127Q96BQ5 260 aa8.25□□□□□ -1.09
ECHDC1-207ENST00000430841 CRELD1Q96HD1 420 aa8.25□□□□□ -1.09
ECHDC1-207ENST00000430841 LGMNQ99538 433 aa8.25□□□□□ -1.09
ECHDC1-207ENST00000430841 DUSP9Q99956 384 aaKnown RBP8.25□□□□□ -1.09
ECHDC1-207ENST00000430841 MRPL45Q9BRJ2 306 aaKnown RBP8.25□□□□□ -1.09
ECHDC1-207ENST00000430841 TRIM9Q9C026 710 aa8.25□□□□□ -1.09
ECHDC1-207ENST00000430841 DCLK3Q9C098 648 aa8.25□□□□□ -1.09
ECHDC1-207ENST00000430841 LRRC27Q9C0I9 530 aa8.25□□□□□ -1.09
ECHDC1-207ENST00000430841 BTBD1Q9H0C5 482 aa8.25□□□□□ -1.09
ECHDC1-207ENST00000430841 CD93Q9NPY3 652 aa8.25□□□□□ -1.09
ECHDC1-207ENST00000430841 OLFML3Q9NRN5 406 aa8.25□□□□□ -1.09
ECHDC1-207ENST00000430841 BLOC1S4Q9NUP1 217 aa8.25□□□□□ -1.09
ECHDC1-207ENST00000430841 PANK4Q9NVE7 773 aa8.25□□□□□ -1.09
ECHDC1-207ENST00000430841 PLK2Q9NYY3 685 aa8.25□□□□□ -1.09
ECHDC1-207ENST00000430841 USP36Q9P275 1121 aaKnown RBP8.25□□□□□ -1.09
ECHDC1-207ENST00000430841 STRIP2Q9ULQ0 834 aa8.25□□□□□ -1.09
ECHDC1-207ENST00000430841 PLA2G4CQ9UP65 541 aa8.25□□□□□ -1.09
ECHDC1-207ENST00000430841 NCKAP1Q9Y2A7 1128 aa8.25□□□□□ -1.09
ECHDC1-207ENST00000430841 ANKRD6Q9Y2G4 727 aa8.25□□□□□ -1.09
ECHDC1-207ENST00000430841 BPTFQ12830 3046 aa8.24□□□□□ -1.09
ECHDC1-207ENST00000430841 NAV2Q8IVL1 2488 aa8.24□□□□□ -1.09
ECHDC1-207ENST00000430841 ASXL3Q9C0F0 2248 aa8.24□□□□□ -1.09
ECHDC1-207ENST00000430841 PRRT4C9JH25 899 aa8.24□□□□□ -1.09
ECHDC1-207ENST00000430841 ENC1O14682 589 aa8.24□□□□□ -1.09
ECHDC1-207ENST00000430841 YKT6O15498 198 aa8.24□□□□□ -1.09
ECHDC1-207ENST00000430841 RNASEH1O60930 286 aaKnown RBP8.24□□□□□ -1.09
ECHDC1-207ENST00000430841 LDOC1O95751 146 aaPredicted RBP8.24□□□□□ -1.09
ECHDC1-207ENST00000430841 SEMA4FO95754 770 aa8.24□□□□□ -1.09
ECHDC1-207ENST00000430841 FAM163BP0C2L3 166 aa8.24□□□□□ -1.09
ECHDC1-207ENST00000430841 FAM200BP0CF97 657 aa8.24□□□□□ -1.09
ECHDC1-207ENST00000430841 ATICP31939 592 aa8.24□□□□□ -1.09
ECHDC1-207ENST00000430841 PLA2G4AP47712 749 aa8.24□□□□□ -1.09
ECHDC1-207ENST00000430841 ARRB1P49407 418 aaPredicted RBP8.24□□□□□ -1.09
ECHDC1-207ENST00000430841 CYP2J2P51589 502 aa8.24□□□□□ -1.09
ECHDC1-207ENST00000430841 UCNP55089 124 aa8.24□□□□□ -1.09
ECHDC1-207ENST00000430841 SMAD1Q15797 465 aaKnown RBP8.24□□□□□ -1.09
ECHDC1-207ENST00000430841 SNRNP35Q16560 246 aaKnown RBP8.24□□□□□ -1.09
ECHDC1-207ENST00000430841 KIF19Q2TAC6 998 aa8.24□□□□□ -1.09
ECHDC1-207ENST00000430841 ZNF667Q5HYK9 610 aa8.24□□□□□ -1.09
ECHDC1-207ENST00000430841 HTR3DQ70Z44 454 aa8.24□□□□□ -1.09
ECHDC1-207ENST00000430841 MARCH9Q86YJ5 346 aa8.24□□□□□ -1.09
ECHDC1-207ENST00000430841 CCDC117Q8IWD4 279 aaPredicted RBP8.24□□□□□ -1.09
ECHDC1-207ENST00000430841 Q8N3U1 123 aa8.24□□□□□ -1.09
ECHDC1-207ENST00000430841 OR5B17Q8NGF7 314 aa8.24□□□□□ -1.09
ECHDC1-207ENST00000430841 SCAMP5Q8TAC9 235 aa8.24□□□□□ -1.09
ECHDC1-207ENST00000430841 DDI1Q8WTU0 396 aa8.24□□□□□ -1.09
ECHDC1-207ENST00000430841 SCARF2Q96GP6 870 aaPredicted RBP8.24□□□□□ -1.09
ECHDC1-207ENST00000430841 FAM84AQ96KN4 292 aa8.24□□□□□ -1.09
ECHDC1-207ENST00000430841 CNDP2Q96KP4 475 aaKnown RBP8.24□□□□□ -1.09
ECHDC1-207ENST00000430841 FIZ1Q96SL8 496 aa8.24□□□□□ -1.09
ECHDC1-207ENST00000430841 CGRRF1Q99675 332 aa8.24□□□□□ -1.09
ECHDC1-207ENST00000430841 ARHGAP9Q9BRR9 750 aa8.24□□□□□ -1.09
ECHDC1-207ENST00000430841 B3GNT5Q9BYG0 378 aa8.24□□□□□ -1.09
ECHDC1-207ENST00000430841 IMPG2Q9BZV3 1241 aa8.24□□□□□ -1.09
ECHDC1-207ENST00000430841 IKZF4Q9H2S9 585 aa8.24□□□□□ -1.09
ECHDC1-207ENST00000430841 DPEP3Q9H4B8 488 aa8.24□□□□□ -1.09
ECHDC1-207ENST00000430841 FBRSQ9HAH7 460 aa8.24□□□□□ -1.09
ECHDC1-207ENST00000430841 ITM2CQ9NQX7 267 aa8.24□□□□□ -1.09
ECHDC1-207ENST00000430841 AASDHPPTQ9NRN7 309 aa8.24□□□□□ -1.09
ECHDC1-207ENST00000430841 HSPBP1Q9NZL4 362 aa8.24□□□□□ -1.09
ECHDC1-207ENST00000430841 MARK1Q9P0L2 795 aa8.24□□□□□ -1.09
ECHDC1-207ENST00000430841 RASAL2Q9UJF2 1139 aa8.24□□□□□ -1.09
ECHDC1-207ENST00000430841 NAGPAQ9UK23 515 aa8.24□□□□□ -1.09
ECHDC1-207ENST00000430841 SMC3Q9UQE7 1217 aa8.24□□□□□ -1.09
ECHDC1-207ENST00000430841 SNX11Q9Y5W9 270 aa8.24□□□□□ -1.09
ECHDC1-207ENST00000430841 VPS37CA5D8V6 355 aaPredicted RBP8.23□□□□□ -1.09
ECHDC1-207ENST00000430841 FAM47DPA6NHR8 397 aa8.23□□□□□ -1.09
ECHDC1-207ENST00000430841 WASH3PC4AMC7 463 aa8.23□□□□□ -1.09
ECHDC1-207ENST00000430841 STX6O43752 255 aa8.23□□□□□ -1.09
ECHDC1-207ENST00000430841 PCDHGA12O60330 932 aa8.23□□□□□ -1.09
ECHDC1-207ENST00000430841 CELA2BP08218 269 aaPredicted RBP8.23□□□□□ -1.09
ECHDC1-207ENST00000430841 C1SP09871 688 aa8.23□□□□□ -1.09
ECHDC1-207ENST00000430841 ITPKBP27987 946 aa8.23□□□□□ -1.09
ECHDC1-207ENST00000430841 GJB2P29033 226 aa8.23□□□□□ -1.09
ECHDC1-207ENST00000430841 ADORA2BP29275 332 aa8.23□□□□□ -1.09
ECHDC1-207ENST00000430841 IL12RB1P42701 662 aa8.23□□□□□ -1.09
ECHDC1-207ENST00000430841 MAP3K7CLP57077 242 aa8.23□□□□□ -1.09
ECHDC1-207ENST00000430841 SLC8A3P57103 927 aa8.23□□□□□ -1.09
ECHDC1-207ENST00000430841 ST8SIA6P61647 398 aa8.23□□□□□ -1.09
ECHDC1-207ENST00000430841 CCDC173Q0VFZ6 552 aa8.23□□□□□ -1.09
ECHDC1-207ENST00000430841 HES3Q5TGS1 186 aa8.23□□□□□ -1.09
ECHDC1-207ENST00000430841 CBWD2Q8IUF1 395 aa8.23□□□□□ -1.09
ECHDC1-207ENST00000430841 OR2T3Q8NH03 318 aa8.23□□□□□ -1.09
ECHDC1-207ENST00000430841 BAHD1Q8TBE0 780 aaPredicted RBP8.23□□□□□ -1.09
ECHDC1-207ENST00000430841 GOLGA1Q92805 767 aa8.23□□□□□ -1.09
ECHDC1-207ENST00000430841 KCNK16Q96T55 309 aa8.23□□□□□ -1.09
ECHDC1-207ENST00000430841 MKRN2Q9H000 416 aaKnown RBP8.23□□□□□ -1.09
ECHDC1-207ENST00000430841 CLMPQ9H6B4 373 aa8.23□□□□□ -1.09
ECHDC1-207ENST00000430841 TM9SF3Q9HD45 589 aa8.23□□□□□ -1.09
ECHDC1-207ENST00000430841 BTBD3Q9Y2F9 522 aa8.23□□□□□ -1.09
ECHDC1-207ENST00000430841 PCDHGA1Q9Y5H4 931 aa8.23□□□□□ -1.09
ECHDC1-207ENST00000430841 PCDHA5Q9Y5H7 936 aa8.23□□□□□ -1.09
ECHDC1-207ENST00000430841 LAMA5O15230 3695 aa8.23□□□□□ -1.09
ECHDC1-207ENST00000430841 MUC22E2RYF6 1773 aaPredicted RBP8.22□□□□□ -1.09
ECHDC1-207ENST00000430841 SMG1Q96Q15 3661 aaKnown RBP8.22□□□□□ -1.09
ECHDC1-207ENST00000430841 TYW5A2RUC4 315 aaKnown RBP8.22□□□□□ -1.09
ECHDC1-207ENST00000430841 LRRC72A6NJI9 287 aa8.22□□□□□ -1.09
ECHDC1-207ENST00000430841 KCNJ18B7U540 433 aa8.22□□□□□ -1.09
ECHDC1-207ENST00000430841 H0Y8X5 98 aa8.22□□□□□ -1.09
ECHDC1-207ENST00000430841 ERVH48-1M5A8F1 160 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms