RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 CCDC130P13994 396 aa12.96□□□□□ -0.33
CPNE4-201ENST00000429747 PSMC3P17980 439 aa12.96□□□□□ -0.33
CPNE4-201ENST00000429747 EEF1DP29692 281 aaKnown RBP12.96□□□□□ -0.33
CPNE4-201ENST00000429747 NAGLUP54802 743 aa12.96□□□□□ -0.33
CPNE4-201ENST00000429747 ABCE1P61221 599 aaKnown RBP12.96□□□□□ -0.33
CPNE4-201ENST00000429747 ADIGQ0VDE8 80 aa12.96□□□□□ -0.33
CPNE4-201ENST00000429747 R3HDM1Q15032 1099 aaKnown RBP12.96□□□□□ -0.33
CPNE4-201ENST00000429747 BTBD8Q5XKL5 378 aa12.96□□□□□ -0.33
CPNE4-201ENST00000429747 REPS2Q8NFH8 660 aa12.96□□□□□ -0.33
CPNE4-201ENST00000429747 OR52K1Q8NGK4 314 aa12.96□□□□□ -0.33
CPNE4-201ENST00000429747 SKA2Q8WVK7 121 aaPredicted RBP12.96□□□□□ -0.33
CPNE4-201ENST00000429747 MPP4Q96JB8 637 aa12.96□□□□□ -0.33
CPNE4-201ENST00000429747 PCDH18Q9HCL0 1135 aa12.96□□□□□ -0.33
CPNE4-201ENST00000429747 NDUFA13Q9P0J0 144 aa12.96□□□□□ -0.33
CPNE4-201ENST00000429747 ITGA11Q9UKX5 1188 aa12.96□□□□□ -0.33
CPNE4-201ENST00000429747 BAG5Q9UL15 447 aa12.96□□□□□ -0.33
CPNE4-201ENST00000429747 HBS1LQ9Y450 684 aaKnown RBP12.96□□□□□ -0.33
CPNE4-201ENST00000429747 CHD4Q14839 1912 aa12.96□□□□□ -0.33
CPNE4-201ENST00000429747 SRP72O76094 671 aaKnown RBP12.96□□□□□ -0.33
CPNE4-201ENST00000429747 APOA4P06727 396 aa12.96□□□□□ -0.33
CPNE4-201ENST00000429747 ZNF286BP0CG31 522 aa12.96□□□□□ -0.33
CPNE4-201ENST00000429747 IVDP26440 423 aa12.96□□□□□ -0.33
CPNE4-201ENST00000429747 POU6F1Q14863 301 aa12.96□□□□□ -0.33
CPNE4-201ENST00000429747 C16orf87Q6PH81 154 aa12.96□□□□□ -0.33
CPNE4-201ENST00000429747 C10orf107Q8IVU9 208 aa12.96□□□□□ -0.33
CPNE4-201ENST00000429747 PLD5Q8N7P1 536 aa12.96□□□□□ -0.33
CPNE4-201ENST00000429747 CXorf38Q8TB03 319 aa12.96□□□□□ -0.33
CPNE4-201ENST00000429747 SLC2A14Q8TDB8 520 aa12.96□□□□□ -0.33
CPNE4-201ENST00000429747 AFG1LQ8WV93 481 aa12.96□□□□□ -0.33
CPNE4-201ENST00000429747 PRPF18Q99633 342 aaKnown RBP12.96□□□□□ -0.33
CPNE4-201ENST00000429747 FAM192AQ9GZU8 254 aa12.96□□□□□ -0.33
CPNE4-201ENST00000429747 ZNF395Q9H8N7 513 aaPredicted RBP12.96□□□□□ -0.33
CPNE4-201ENST00000429747 UBQLN1Q9UMX0 589 aaKnown RBP12.96□□□□□ -0.33
CPNE4-201ENST00000429747 ZNF541Q9H0D2 1346 aa12.96□□□□□ -0.33
CPNE4-201ENST00000429747 KAT6AQ92794 2004 aa12.96□□□□□ -0.34
CPNE4-201ENST00000429747 SUPT7LO94864 414 aa12.96□□□□□ -0.34
CPNE4-201ENST00000429747 SLC25A27O95847 323 aa12.96□□□□□ -0.34
CPNE4-201ENST00000429747 CYP2C9P11712 490 aa12.96□□□□□ -0.34
CPNE4-201ENST00000429747 RPS12P25398 132 aaKnown RBP12.96□□□□□ -0.34
CPNE4-201ENST00000429747 NR2C2P49116 596 aa12.96□□□□□ -0.34
CPNE4-201ENST00000429747 STX5Q13190 355 aa12.96□□□□□ -0.34
CPNE4-201ENST00000429747 SH3PXD2AQ5TCZ1 1133 aa12.96□□□□□ -0.34
CPNE4-201ENST00000429747 FAM136AQ96C01 138 aa12.96□□□□□ -0.34
CPNE4-201ENST00000429747 NRBF2Q96F24 287 aa12.96□□□□□ -0.34
CPNE4-201ENST00000429747 IFT43Q96FT9 208 aa12.96□□□□□ -0.34
CPNE4-201ENST00000429747 MARK4Q96L34 752 aa12.96□□□□□ -0.34
CPNE4-201ENST00000429747 SYT11Q9BT88 431 aa12.96□□□□□ -0.34
CPNE4-201ENST00000429747 ZCWPW1Q9H0M4 648 aa12.96□□□□□ -0.34
CPNE4-201ENST00000429747 DHX33Q9H6R0 707 aaKnown RBP12.96□□□□□ -0.34
CPNE4-201ENST00000429747 NMRAL1Q9HBL8 299 aa12.96□□□□□ -0.34
CPNE4-201ENST00000429747 A0A0A0MRY4 1105 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 TM7SF2O76062 418 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 PIGNO95427 931 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 SETSIPP0DME0 302 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 STMN1P16949 149 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 AKAP5P24588 427 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 WASHC5Q12768 1159 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 GALNTL6Q49A17 601 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 NOTUMQ6P988 496 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 TRMT10BQ6PF06 316 aaKnown RBP12.95□□□□□ -0.34
CPNE4-201ENST00000429747 ARCQ7LC44 396 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 PDCD6IPQ8WUM4 868 aaKnown RBP12.95□□□□□ -0.34
CPNE4-201ENST00000429747 CNDP1Q96KN2 507 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 SPATA13Q96N96 652 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 WDCPQ9H6R7 721 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 SP110Q9HB58 689 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 SPC25Q9HBM1 224 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 ACSS2Q9NR19 701 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 ARHGEF37A1IGU5 675 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 MTSS1O43312 755 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 UGT1A9O60656 530 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 ITGA2BP08514 1039 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 GOT1P17174 413 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 LAMC2Q13753 1193 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 TCEAL1Q15170 157 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 CCDC153Q494R4 210 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 AGKQ53H12 422 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 DPY19L2Q6NUT2 758 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 KCNMB4Q86W47 210 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 NAT8LQ8N9F0 302 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 WNK4Q96J92 1243 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 APBA2Q99767 749 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 MAGEB5Q9BZ81 275 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 CCDC90BQ9GZT6 254 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 UGT1A7Q9HAW7 530 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 UGT1A10Q9HAW8 530 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 UGT1A8Q9HAW9 530 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 PCDHA11Q9Y5I1 949 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 TGDSO95455 350 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 GTF2A2P52657 109 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 KLF1Q13351 362 aaPredicted RBP12.95□□□□□ -0.34
CPNE4-201ENST00000429747 KRT72Q14CN4 511 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 ZNF484Q5JVG2 852 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 ANO7Q6IWH7 933 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 CCDC117Q8IWD4 279 aaPredicted RBP12.95□□□□□ -0.34
CPNE4-201ENST00000429747 ZNF786Q8N393 782 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 PCYOX1LQ8NBM8 494 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 B4GALNT2Q8NHY0 566 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 FAM193BQ96PV7 902 aaPredicted RBP12.95□□□□□ -0.34
CPNE4-201ENST00000429747 ELOVL4Q9GZR5 314 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms