RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 KREMEN1Q96MU8 473 aa17.79■□□□□ 0.44
TRIM39-209ENST00000428728 INTS2Q9H0H0 1204 aaKnown RBP17.79■□□□□ 0.44
TRIM39-209ENST00000428728 SLC32A1Q9H598 525 aa17.79■□□□□ 0.44
TRIM39-209ENST00000428728 GGA2Q9UJY4 613 aa17.79■□□□□ 0.44
TRIM39-209ENST00000428728 PLXNA2O75051 1894 aa17.78■□□□□ 0.44
TRIM39-209ENST00000428728 ARHGAP33O14559 1287 aa17.78■□□□□ 0.44
TRIM39-209ENST00000428728 OPHN1O60890 802 aa17.78■□□□□ 0.44
TRIM39-209ENST00000428728 TOP3BO95985 862 aaKnown RBP17.78■□□□□ 0.44
TRIM39-209ENST00000428728 IGLV3-27P01718 113 aa17.78■□□□□ 0.44
TRIM39-209ENST00000428728 AFPP02771 609 aaKnown RBP17.78■□□□□ 0.44
TRIM39-209ENST00000428728 ACADMP11310 421 aa17.78■□□□□ 0.44
TRIM39-209ENST00000428728 TBX4P57082 545 aa17.78■□□□□ 0.44
TRIM39-209ENST00000428728 GCNT1Q02742 428 aa17.78■□□□□ 0.44
TRIM39-209ENST00000428728 WDR45BQ5MNZ6 344 aa17.78■□□□□ 0.44
TRIM39-209ENST00000428728 FAM124AQ86V42 546 aa17.78■□□□□ 0.44
TRIM39-209ENST00000428728 EHBP1Q8NDI1 1231 aa17.78■□□□□ 0.44
TRIM39-209ENST00000428728 WFIKKN2Q8TEU8 576 aa17.78■□□□□ 0.44
TRIM39-209ENST00000428728 SRRTQ9BXP5 876 aaKnown RBP17.78■□□□□ 0.44
TRIM39-209ENST00000428728 MIR1-1HGQ9H1L0 117 aa17.78■□□□□ 0.44
TRIM39-209ENST00000428728 ST7Q9NRC1 585 aa17.78■□□□□ 0.44
TRIM39-209ENST00000428728 WSB2Q9NYS7 404 aaPredicted RBP17.78■□□□□ 0.44
TRIM39-209ENST00000428728 SUSD2Q9UGT4 822 aa17.78■□□□□ 0.44
TRIM39-209ENST00000428728 STOML2Q9UJZ1 356 aa17.78■□□□□ 0.44
TRIM39-209ENST00000428728 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.78■□□□□ 0.44
TRIM39-209ENST00000428728 GOLGA6L7A0A1B0GV03 622 aa17.77■□□□□ 0.44
TRIM39-209ENST00000428728 SPAARA0A1B0GVQ0 90 aa17.77■□□□□ 0.44
TRIM39-209ENST00000428728 TIMM44O43615 452 aa17.77■□□□□ 0.44
TRIM39-209ENST00000428728 TBL1XO60907 577 aa17.77■□□□□ 0.44
TRIM39-209ENST00000428728 FBXO21O94952 628 aa17.77■□□□□ 0.44
TRIM39-209ENST00000428728 GNA14O95837 355 aa17.77■□□□□ 0.44
TRIM39-209ENST00000428728 SYPP08247 313 aa17.77■□□□□ 0.44
TRIM39-209ENST00000428728 PABPC1P11940 636 aaKnown RBP17.77■□□□□ 0.44
TRIM39-209ENST00000428728 GNSP15586 552 aa17.77■□□□□ 0.44
TRIM39-209ENST00000428728 SLC6A4P31645 630 aa17.77■□□□□ 0.44
TRIM39-209ENST00000428728 SLC11A2P49281 568 aa17.77■□□□□ 0.44
TRIM39-209ENST00000428728 SEMA3BQ13214 749 aa17.77■□□□□ 0.44
TRIM39-209ENST00000428728 FAM133BQ5BKY9 247 aaKnown RBP17.77■□□□□ 0.44
TRIM39-209ENST00000428728 NUGGCQ68CJ6 796 aa17.77■□□□□ 0.44
TRIM39-209ENST00000428728 FOXR2Q6PJQ5 311 aa17.77■□□□□ 0.44
TRIM39-209ENST00000428728 PIP4P1Q86T03 277 aa17.77■□□□□ 0.44
TRIM39-209ENST00000428728 METTL3Q86U44 580 aaKnown RBP17.77■□□□□ 0.44
TRIM39-209ENST00000428728 AHI1Q8N157 1196 aa17.77■□□□□ 0.44
TRIM39-209ENST00000428728 ZCCHC9Q8N567 271 aaKnown RBP17.77■□□□□ 0.44
TRIM39-209ENST00000428728 FAM149B1Q96BN6 582 aa17.77■□□□□ 0.44
TRIM39-209ENST00000428728 HSFY1Q96LI6 401 aa17.77■□□□□ 0.44
TRIM39-209ENST00000428728 ITM2CQ9NQX7 267 aa17.77■□□□□ 0.44
TRIM39-209ENST00000428728 STIM2Q9P246 746 aa17.77■□□□□ 0.44
TRIM39-209ENST00000428728 USP24Q9UPU5 2620 aa17.76■□□□□ 0.43
TRIM39-209ENST00000428728 CD70P32970 193 aa17.76■□□□□ 0.43
TRIM39-209ENST00000428728 SIM1P81133 766 aaPredicted RBP17.76■□□□□ 0.43
TRIM39-209ENST00000428728 GRIK2Q13002 908 aa17.76■□□□□ 0.43
TRIM39-209ENST00000428728 PIK3R6Q5UE93 754 aa17.76■□□□□ 0.43
TRIM39-209ENST00000428728 DCAF12L1Q5VU92 463 aa17.76■□□□□ 0.43
TRIM39-209ENST00000428728 MBLAC2Q68D91 279 aa17.76■□□□□ 0.43
TRIM39-209ENST00000428728 ADIPOR2Q86V24 386 aa17.76■□□□□ 0.43
TRIM39-209ENST00000428728 UNC45BQ8IWX7 931 aa17.76■□□□□ 0.43
TRIM39-209ENST00000428728 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.76■□□□□ 0.43
TRIM39-209ENST00000428728 DQX1Q8TE96 717 aaKnown RBP17.76■□□□□ 0.43
TRIM39-209ENST00000428728 SNX19Q92543 992 aa17.76■□□□□ 0.43
TRIM39-209ENST00000428728 PRICKLE1Q96MT3 831 aaPredicted RBP17.76■□□□□ 0.43
TRIM39-209ENST00000428728 C1QTNF9BB2RNN3 333 aa17.75■□□□□ 0.43
TRIM39-209ENST00000428728 ACSL4O60488 711 aa17.75■□□□□ 0.43
TRIM39-209ENST00000428728 MOCS2O96007 188 aaPredicted RBP17.75■□□□□ 0.43
TRIM39-209ENST00000428728 C1QTNF9P0C862 333 aa17.75■□□□□ 0.43
TRIM39-209ENST00000428728 OXTRP30559 389 aa17.75■□□□□ 0.43
TRIM39-209ENST00000428728 MARSP56192 900 aaKnown RBP17.75■□□□□ 0.43
TRIM39-209ENST00000428728 RING1Q06587 406 aa17.75■□□□□ 0.43
TRIM39-209ENST00000428728 CAMK2GQ13555 558 aaPredicted RBP17.75■□□□□ 0.43
TRIM39-209ENST00000428728 NADSYN1Q6IA69 706 aa17.75■□□□□ 0.43
TRIM39-209ENST00000428728 DENND1BQ6P3S1 775 aa17.75■□□□□ 0.43
TRIM39-209ENST00000428728 CREBRFQ8IUR6 639 aa17.75■□□□□ 0.43
TRIM39-209ENST00000428728 MFN1Q8IWA4 741 aa17.75■□□□□ 0.43
TRIM39-209ENST00000428728 SCUBE3Q8IX30 993 aa17.75■□□□□ 0.43
TRIM39-209ENST00000428728 HJURPQ8NCD3 748 aaPredicted RBP17.75■□□□□ 0.43
TRIM39-209ENST00000428728 OR2T3Q8NH03 318 aa17.75■□□□□ 0.43
TRIM39-209ENST00000428728 ADAM32Q8TC27 787 aa17.75■□□□□ 0.43
TRIM39-209ENST00000428728 FCRL2Q96LA5 508 aaPredicted RBP17.75■□□□□ 0.43
TRIM39-209ENST00000428728 SERPINB11Q96P15 392 aa17.75■□□□□ 0.43
TRIM39-209ENST00000428728 ADAM33Q9BZ11 813 aa17.75■□□□□ 0.43
TRIM39-209ENST00000428728 LHX5Q9H2C1 402 aa17.75■□□□□ 0.43
TRIM39-209ENST00000428728 TMEM245Q9H330 911 aa17.75■□□□□ 0.43
TRIM39-209ENST00000428728 UBE2TQ9NPD8 197 aaPredicted RBP17.75■□□□□ 0.43
TRIM39-209ENST00000428728 PLA2G4CQ9UP65 541 aa17.75■□□□□ 0.43
TRIM39-209ENST00000428728 A0A1B0GTW7 788 aa17.74■□□□□ 0.43
TRIM39-209ENST00000428728 TYW5A2RUC4 315 aaKnown RBP17.74■□□□□ 0.43
TRIM39-209ENST00000428728 THAP12O43422 761 aa17.74■□□□□ 0.43
TRIM39-209ENST00000428728 LETM1O95202 739 aaPredicted RBP17.74■□□□□ 0.43
TRIM39-209ENST00000428728 IGLV3-19P01714 112 aa17.74■□□□□ 0.43
TRIM39-209ENST00000428728 FYNP06241 537 aa17.74■□□□□ 0.43
TRIM39-209ENST00000428728 POLR2EP19388 210 aaKnown RBP17.74■□□□□ 0.43
TRIM39-209ENST00000428728 RPS24P62847 133 aaKnown RBP17.74■□□□□ 0.43
TRIM39-209ENST00000428728 PTPRNQ16849 979 aa17.74■□□□□ 0.43
TRIM39-209ENST00000428728 GJB7Q6PEY0 223 aa17.74■□□□□ 0.43
TRIM39-209ENST00000428728 UNQ6494/PRO21346Q6UXR6 183 aa17.74■□□□□ 0.43
TRIM39-209ENST00000428728 KIAA0907Q7Z7F0 614 aaPredicted RBP17.74■□□□□ 0.43
TRIM39-209ENST00000428728 TAC4Q86UU9 113 aa17.74■□□□□ 0.43
TRIM39-209ENST00000428728 DNASE2BQ8WZ79 361 aa17.74■□□□□ 0.43
TRIM39-209ENST00000428728 MYEOVQ96EZ4 313 aa17.74■□□□□ 0.43
TRIM39-209ENST00000428728 CRACR2AQ9BSW2 395 aa17.74■□□□□ 0.43
TRIM39-209ENST00000428728 NUP58Q9BVL2 599 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms