RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 POF1BQ8WVV4 589 aa9.38□□□□□ -0.91
NR1I3-209ENST00000428574 C1orf54Q8WWF1 131 aa9.38□□□□□ -0.91
NR1I3-209ENST00000428574 ATG4AQ8WYN0 398 aa9.38□□□□□ -0.91
NR1I3-209ENST00000428574 FATE1Q969F0 183 aa9.38□□□□□ -0.91
NR1I3-209ENST00000428574 RNF34Q969K3 372 aa9.38□□□□□ -0.91
NR1I3-209ENST00000428574 ACSF2Q96CM8 615 aaPredicted RBP9.38□□□□□ -0.91
NR1I3-209ENST00000428574 LRRC45Q96CN5 670 aa9.38□□□□□ -0.91
NR1I3-209ENST00000428574 FCRL2Q96LA5 508 aaPredicted RBP9.38□□□□□ -0.91
NR1I3-209ENST00000428574 ZNF512Q96ME7 567 aaPredicted RBP9.38□□□□□ -0.91
NR1I3-209ENST00000428574 OLFM3Q96PB7 478 aa9.38□□□□□ -0.91
NR1I3-209ENST00000428574 QKIQ96PU8 341 aaKnown RBP eCLIP9.38□□□□□ -0.91
NR1I3-209ENST00000428574 RAB6CQ9H0N0 254 aa9.38□□□□□ -0.91
NR1I3-209ENST00000428574 CATSPERBQ9H7T0 1116 aa9.38□□□□□ -0.91
NR1I3-209ENST00000428574 ENTPD7Q9NQZ7 604 aa9.38□□□□□ -0.91
NR1I3-209ENST00000428574 OSER1Q9NX31 292 aa9.38□□□□□ -0.91
NR1I3-209ENST00000428574 ZDHHC7Q9NXF8 308 aa9.38□□□□□ -0.91
NR1I3-209ENST00000428574 MARCH2Q9P0N8 246 aa9.38□□□□□ -0.91
NR1I3-209ENST00000428574 MTRF1LQ9UGC7 380 aaKnown RBP9.38□□□□□ -0.91
NR1I3-209ENST00000428574 DNPEPQ9ULA0 475 aa9.38□□□□□ -0.91
NR1I3-209ENST00000428574 ZNF148Q9UQR1 794 aa9.38□□□□□ -0.91
NR1I3-209ENST00000428574 MYO16Q9Y6X6 1858 aa9.37□□□□□ -0.91
NR1I3-209ENST00000428574 IGLV3-10A0A075B6K4 115 aa9.37□□□□□ -0.91
NR1I3-209ENST00000428574 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.37□□□□□ -0.91
NR1I3-209ENST00000428574 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.37□□□□□ -0.91
NR1I3-209ENST00000428574 LCHNA4D1U4 455 aa9.37□□□□□ -0.91
NR1I3-209ENST00000428574 STK10O94804 968 aaKnown RBP9.37□□□□□ -0.91
NR1I3-209ENST00000428574 SEC31AO94979 1220 aaKnown RBP9.37□□□□□ -0.91
NR1I3-209ENST00000428574 LRG1P02750 347 aa9.37□□□□□ -0.91
NR1I3-209ENST00000428574 GOT1P17174 413 aa9.37□□□□□ -0.91
NR1I3-209ENST00000428574 DNAJB2P25686 324 aa9.37□□□□□ -0.91
NR1I3-209ENST00000428574 BMP8BP34820 402 aa9.37□□□□□ -0.91
NR1I3-209ENST00000428574 ACTN2P35609 894 aa9.37□□□□□ -0.91
NR1I3-209ENST00000428574 CLCN4P51793 760 aa9.37□□□□□ -0.91
NR1I3-209ENST00000428574 ATXN1P54253 815 aaKnown RBP9.37□□□□□ -0.91
NR1I3-209ENST00000428574 SLC7A5Q01650 507 aa9.37□□□□□ -0.91
NR1I3-209ENST00000428574 TWF1Q12792 350 aa9.37□□□□□ -0.91
NR1I3-209ENST00000428574 IFRD2Q12894 506 aaPredicted RBP9.37□□□□□ -0.91
NR1I3-209ENST00000428574 MTMR3Q13615 1198 aa9.37□□□□□ -0.91
NR1I3-209ENST00000428574 MORF4L2Q15014 288 aa9.37□□□□□ -0.91
NR1I3-209ENST00000428574 P3H1Q32P28 736 aa9.37□□□□□ -0.91
NR1I3-209ENST00000428574 C5orf22Q49AR2 442 aa9.37□□□□□ -0.91
NR1I3-209ENST00000428574 LRRC31Q6UY01 552 aa9.37□□□□□ -0.91
NR1I3-209ENST00000428574 GSTA5Q7RTV2 222 aa9.37□□□□□ -0.91
NR1I3-209ENST00000428574 HDXQ7Z353 690 aa9.37□□□□□ -0.91
NR1I3-209ENST00000428574 DNAJB7Q7Z6W7 309 aaPredicted RBP9.37□□□□□ -0.91
NR1I3-209ENST00000428574 RELL1Q8IUW5 271 aa9.37□□□□□ -0.91
NR1I3-209ENST00000428574 KREMEN2Q8NCW0 462 aa9.37□□□□□ -0.91
NR1I3-209ENST00000428574 CASKIN2Q8WXE0 1202 aa9.37□□□□□ -0.91
NR1I3-209ENST00000428574 RSAD2Q8WXG1 361 aa9.37□□□□□ -0.91
NR1I3-209ENST00000428574 ART4Q93070 314 aa9.37□□□□□ -0.91
NR1I3-209ENST00000428574 TBC1D31Q96DN5 1066 aa9.37□□□□□ -0.91
NR1I3-209ENST00000428574 CCDC114Q96M63 670 aa9.37□□□□□ -0.91
NR1I3-209ENST00000428574 PPP1R2P1Q96PQ5 205 aa9.37□□□□□ -0.91
NR1I3-209ENST00000428574 FMO2Q99518 471 aa9.37□□□□□ -0.91
NR1I3-209ENST00000428574 VAT1Q99536 393 aa9.37□□□□□ -0.91
NR1I3-209ENST00000428574 CDCA3Q99618 268 aaPredicted RBP9.37□□□□□ -0.91
NR1I3-209ENST00000428574 GDF15Q99988 308 aa9.37□□□□□ -0.91
NR1I3-209ENST00000428574 DDX50Q9BQ39 737 aaKnown RBP9.37□□□□□ -0.91
NR1I3-209ENST00000428574 ACBD3Q9H3P7 528 aa9.37□□□□□ -0.91
NR1I3-209ENST00000428574 ZDHHC18Q9NUE0 388 aa9.37□□□□□ -0.91
NR1I3-209ENST00000428574 GPATCH2LQ9NWQ4 482 aa9.37□□□□□ -0.91
NR1I3-209ENST00000428574 GRHL1Q9NZI5 618 aa9.37□□□□□ -0.91
NR1I3-209ENST00000428574 DTLQ9NZJ0 730 aa9.37□□□□□ -0.91
NR1I3-209ENST00000428574 ASIC3Q9UHC3 531 aa9.37□□□□□ -0.91
NR1I3-209ENST00000428574 STOML2Q9UJZ1 356 aa9.37□□□□□ -0.91
NR1I3-209ENST00000428574 SHOC2Q9UQ13 582 aa9.37□□□□□ -0.91
NR1I3-209ENST00000428574 NEU3Q9UQ49 428 aa9.37□□□□□ -0.91
NR1I3-209ENST00000428574 GREB1Q4ZG55 1949 aa9.37□□□□□ -0.91
NR1I3-209ENST00000428574 C5orf60A6NFR6 353 aa9.36□□□□□ -0.91
NR1I3-209ENST00000428574 DAPK3O43293 454 aa9.36□□□□□ -0.91
NR1I3-209ENST00000428574 XYLBO75191 536 aa9.36□□□□□ -0.91
NR1I3-209ENST00000428574 PAGE1O75459 146 aa9.36□□□□□ -0.91
NR1I3-209ENST00000428574 SOAT2O75908 522 aa9.36□□□□□ -0.91
NR1I3-209ENST00000428574 LRIG2O94898 1065 aa9.36□□□□□ -0.91
NR1I3-209ENST00000428574 KRT14P02533 472 aa9.36□□□□□ -0.91
NR1I3-209ENST00000428574 F11P03951 625 aa9.36□□□□□ -0.91
NR1I3-209ENST00000428574 C8AP07357 584 aa9.36□□□□□ -0.91
NR1I3-209ENST00000428574 PECAM1P16284 738 aaPredicted RBP9.36□□□□□ -0.91
NR1I3-209ENST00000428574 ERCC2P18074 760 aa9.36□□□□□ -0.91
NR1I3-209ENST00000428574 IVDP26440 423 aa9.36□□□□□ -0.91
NR1I3-209ENST00000428574 EPHB2P29323 1055 aa9.36□□□□□ -0.91
NR1I3-209ENST00000428574 ECHS1P30084 290 aa9.36□□□□□ -0.91
NR1I3-209ENST00000428574 MAGEA6P43360 314 aa9.36□□□□□ -0.91
NR1I3-209ENST00000428574 SLC11A2P49281 568 aa9.36□□□□□ -0.91
NR1I3-209ENST00000428574 CARSP49589 748 aaKnown RBP9.36□□□□□ -0.91
NR1I3-209ENST00000428574 HARS2P49590 506 aaKnown RBP9.36□□□□□ -0.91
NR1I3-209ENST00000428574 RABGGTBP53611 331 aa9.36□□□□□ -0.91
NR1I3-209ENST00000428574 DYNLT1P63172 113 aa9.36□□□□□ -0.91
NR1I3-209ENST00000428574 CDK16Q00536 496 aa9.36□□□□□ -0.91
NR1I3-209ENST00000428574 MMRN1Q13201 1228 aa9.36□□□□□ -0.91
NR1I3-209ENST00000428574 SLMAPQ14BN4 828 aa9.36□□□□□ -0.91
NR1I3-209ENST00000428574 PRKD1Q15139 912 aaPredicted RBP9.36□□□□□ -0.91
NR1I3-209ENST00000428574 TTC39BQ5VTQ0 682 aaPredicted RBP9.36□□□□□ -0.91
NR1I3-209ENST00000428574 SDHAF4Q5VUM1 108 aa9.36□□□□□ -0.91
NR1I3-209ENST00000428574 DDX42Q86XP3 938 aaKnown RBP eCLIP9.36□□□□□ -0.91
NR1I3-209ENST00000428574 ADAM32Q8TC27 787 aa9.36□□□□□ -0.91
NR1I3-209ENST00000428574 GIPC2Q8TF65 315 aa9.36□□□□□ -0.91
NR1I3-209ENST00000428574 HDAC11Q96DB2 347 aa9.36□□□□□ -0.91
NR1I3-209ENST00000428574 TSGA13Q96PP4 275 aa9.36□□□□□ -0.91
NR1I3-209ENST00000428574 GCNAQ96QF7 691 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms