RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 TRPV2Q9Y5S1 764 aa13.48□□□□□ -0.25
SPG11-202ENST00000427534 GSAPA4D1B5 854 aa13.48□□□□□ -0.25
SPG11-202ENST00000427534 NEK2P51955 445 aa13.48□□□□□ -0.25
SPG11-202ENST00000427534 TREML2Q5T2D2 321 aa13.48□□□□□ -0.25
SPG11-202ENST00000427534 MARC1Q5VT66 337 aa13.48□□□□□ -0.25
SPG11-202ENST00000427534 DEFB106AQ8N104 65 aa13.48□□□□□ -0.25
SPG11-202ENST00000427534 ELMO1Q92556 727 aa13.48□□□□□ -0.25
SPG11-202ENST00000427534 ERP44Q9BS26 406 aa13.48□□□□□ -0.25
SPG11-202ENST00000427534 KLHL1Q9NR64 748 aa13.48□□□□□ -0.25
SPG11-202ENST00000427534 CTNNAL1Q9UBT7 734 aa13.48□□□□□ -0.25
SPG11-202ENST00000427534 SREBF1P36956 1147 aa13.48□□□□□ -0.25
SPG11-202ENST00000427534 GPC2Q8N158 579 aa13.48□□□□□ -0.25
SPG11-202ENST00000427534 RNF148Q8N7C7 305 aa13.48□□□□□ -0.25
SPG11-202ENST00000427534 ANKRD7Q92527 254 aa13.48□□□□□ -0.25
SPG11-202ENST00000427534 MTERF3Q96E29 417 aa13.48□□□□□ -0.25
SPG11-202ENST00000427534 KBTBD4Q9NVX7 518 aa13.48□□□□□ -0.25
SPG11-202ENST00000427534 PRKAG3Q9UGI9 489 aa13.48□□□□□ -0.25
SPG11-202ENST00000427534 POLG2Q9UHN1 485 aa13.48□□□□□ -0.25
SPG11-202ENST00000427534 ANKRD63C9JTQ0 380 aa13.47□□□□□ -0.25
SPG11-202ENST00000427534 DAB1O75553 588 aa13.47□□□□□ -0.25
SPG11-202ENST00000427534 GSTA3Q16772 222 aa13.47□□□□□ -0.25
SPG11-202ENST00000427534 KIAA0319LQ8IZA0 1049 aa13.47□□□□□ -0.25
SPG11-202ENST00000427534 CFAP52Q8N1V2 620 aa13.47□□□□□ -0.25
SPG11-202ENST00000427534 TMEM199Q8N511 208 aa13.47□□□□□ -0.25
SPG11-202ENST00000427534 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.47□□□□□ -0.25
SPG11-202ENST00000427534 CXorf40AQ8TE69 158 aa13.47□□□□□ -0.25
SPG11-202ENST00000427534 USP7Q93009 1102 aa13.47□□□□□ -0.25
SPG11-202ENST00000427534 DNAJC1Q96KC8 554 aaKnown RBP13.47□□□□□ -0.25
SPG11-202ENST00000427534 TBCDQ9BTW9 1192 aa13.47□□□□□ -0.25
SPG11-202ENST00000427534 ZMYND8Q9ULU4 1186 aaPredicted RBP13.47□□□□□ -0.25
SPG11-202ENST00000427534 SMIM10L2AP0DMW4 78 aa13.47□□□□□ -0.25
SPG11-202ENST00000427534 SMIM10L2BP0DMW5 78 aa13.47□□□□□ -0.25
SPG11-202ENST00000427534 EPS8Q12929 822 aa13.47□□□□□ -0.25
SPG11-202ENST00000427534 COL9A2Q14055 689 aaPredicted RBP13.47□□□□□ -0.25
SPG11-202ENST00000427534 AGBL2Q5U5Z8 902 aa13.47□□□□□ -0.25
SPG11-202ENST00000427534 CD99L2Q8TCZ2 262 aa13.47□□□□□ -0.25
SPG11-202ENST00000427534 SLC16A10Q8TF71 515 aa13.47□□□□□ -0.25
SPG11-202ENST00000427534 THAP11Q96EK4 314 aa13.47□□□□□ -0.25
SPG11-202ENST00000427534 BBS4Q96RK4 519 aa13.47□□□□□ -0.25
SPG11-202ENST00000427534 GTF3C4Q9UKN8 822 aa13.47□□□□□ -0.25
SPG11-202ENST00000427534 LGALS2P05162 132 aa13.47□□□□□ -0.25
SPG11-202ENST00000427534 BCL2L1Q07817 233 aa13.47□□□□□ -0.25
SPG11-202ENST00000427534 NTRK3Q16288 839 aa13.47□□□□□ -0.25
SPG11-202ENST00000427534 ATP6AP1LQ52LC2 224 aa13.47□□□□□ -0.25
SPG11-202ENST00000427534 ZMAT2Q96NC0 199 aaKnown RBP13.47□□□□□ -0.25
SPG11-202ENST00000427534 PPP1R10Q96QC0 940 aaKnown RBP13.47□□□□□ -0.25
SPG11-202ENST00000427534 HAO1Q9UJM8 370 aa13.47□□□□□ -0.25
SPG11-202ENST00000427534 PIAS1O75925 651 aa13.47□□□□□ -0.25
SPG11-202ENST00000427534 YBX3P16989 372 aaKnown RBP eCLIP13.47□□□□□ -0.252e-6■□□□□ 10.6
SPG11-202ENST00000427534 S100A5P33763 92 aa13.47□□□□□ -0.25
SPG11-202ENST00000427534 C15orf59Q2T9L4 293 aaPredicted RBP13.47□□□□□ -0.25
SPG11-202ENST00000427534 EARS2Q5JPH6 523 aaKnown RBP13.47□□□□□ -0.25
SPG11-202ENST00000427534 RBM43Q6ZSC3 357 aaKnown RBP13.47□□□□□ -0.25
SPG11-202ENST00000427534 MILR1Q7Z6M3 343 aa13.47□□□□□ -0.25
SPG11-202ENST00000427534 KRT77Q7Z794 578 aa13.47□□□□□ -0.25
SPG11-202ENST00000427534 RASAL3Q86YV0 1011 aa13.47□□□□□ -0.25
SPG11-202ENST00000427534 FOXP3Q9BZS1 431 aa13.47□□□□□ -0.25
SPG11-202ENST00000427534 AKAP3O75969 853 aa13.47□□□□□ -0.25
SPG11-202ENST00000427534 SYN1P17600 705 aa13.47□□□□□ -0.25
SPG11-202ENST00000427534 EHD4Q9H223 541 aa13.47□□□□□ -0.25
SPG11-202ENST00000427534 PARVBQ9HBI1 364 aa13.47□□□□□ -0.25
SPG11-202ENST00000427534 IL17RBQ9NRM6 502 aa13.47□□□□□ -0.25
SPG11-202ENST00000427534 TMPRSS4Q9NRS4 437 aa13.47□□□□□ -0.25
SPG11-202ENST00000427534 SDR42E2A6NKP2 422 aa13.46□□□□□ -0.25
SPG11-202ENST00000427534 HNRNPCP07910 306 aaKnown RBP eCLIP13.46□□□□□ -0.257e-10■■■■■ 30.9
SPG11-202ENST00000427534 FDFT1P37268 417 aa13.46□□□□□ -0.25
SPG11-202ENST00000427534 CRYMQ14894 314 aa13.46□□□□□ -0.25
SPG11-202ENST00000427534 ZCCHC23Q6ZST2 131 aa13.46□□□□□ -0.25
SPG11-202ENST00000427534 GMCL1P1Q8NEA9 526 aa13.46□□□□□ -0.25
SPG11-202ENST00000427534 RNF31Q96EP0 1072 aa13.46□□□□□ -0.25
SPG11-202ENST00000427534 SEC16BQ96JE7 1060 aa13.46□□□□□ -0.25
SPG11-202ENST00000427534 CCT8L2Q96SF2 557 aa13.46□□□□□ -0.25
SPG11-202ENST00000427534 NSMCE4AQ9NXX6 385 aa13.46□□□□□ -0.25
SPG11-202ENST00000427534 SNX13Q9Y5W8 968 aa13.46□□□□□ -0.25
SPG11-202ENST00000427534 TCRBV5S4A2TA0A5A2 114 aa13.46□□□□□ -0.25
SPG11-202ENST00000427534 EIF3HO15372 352 aaKnown RBP eCLIP13.46□□□□□ -0.252e-6■■■■□ 21.2
SPG11-202ENST00000427534 ETS1P14921 441 aa13.46□□□□□ -0.25
SPG11-202ENST00000427534 PTPRAP18433 802 aa13.46□□□□□ -0.25
SPG11-202ENST00000427534 DLG4P78352 724 aa13.46□□□□□ -0.25
SPG11-202ENST00000427534 FGD3Q5JSP0 725 aa13.46□□□□□ -0.25
SPG11-202ENST00000427534 R3HCC1LQ7Z5L2 792 aaKnown RBP13.46□□□□□ -0.25
SPG11-202ENST00000427534 WDR49Q8IV35 697 aa13.46□□□□□ -0.25
SPG11-202ENST00000427534 SMARCD1Q96GM5 515 aa13.46□□□□□ -0.25
SPG11-202ENST00000427534 NR2E3Q9Y5X4 410 aa13.46□□□□□ -0.25
SPG11-202ENST00000427534 RBAK-RBAKDNI3L0D1 243 aa13.46□□□□□ -0.25
SPG11-202ENST00000427534 USP1O94782 785 aa13.46□□□□□ -0.25
SPG11-202ENST00000427534 CXCL14O95715 111 aa13.46□□□□□ -0.25
SPG11-202ENST00000427534 KRT8P05787 483 aa13.46□□□□□ -0.25
SPG11-202ENST00000427534 NFKB1P19838 968 aa13.46□□□□□ -0.25
SPG11-202ENST00000427534 MAXP61244 160 aa13.46□□□□□ -0.25
SPG11-202ENST00000427534 GALNT3Q14435 633 aa13.46□□□□□ -0.25
SPG11-202ENST00000427534 PKN1Q16512 942 aa13.46□□□□□ -0.25
SPG11-202ENST00000427534 HEATR4Q86WZ0 1026 aa13.46□□□□□ -0.25
SPG11-202ENST00000427534 SLC13A5Q86YT5 568 aaPredicted RBP13.46□□□□□ -0.25
SPG11-202ENST00000427534 COLGALT2Q8IYK4 626 aa13.46□□□□□ -0.25
SPG11-202ENST00000427534 FEM1CQ96JP0 617 aa13.46□□□□□ -0.25
SPG11-202ENST00000427534 ABCG4Q9H172 646 aa13.46□□□□□ -0.25
SPG11-202ENST00000427534 CYP39A1Q9NYL5 469 aa13.46□□□□□ -0.25
SPG11-202ENST00000427534 KRT33AO76009 404 aa13.46□□□□□ -0.25
SPG11-202ENST00000427534 MUTP22033 750 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms