RNA–Protein interactions for RNA: ENST00000416529.5

RBM39-209, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 594 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-209ENST00000416529 AP5Z1O43299 807 aa8.01□□□□□ -1.13
RBM39-209ENST00000416529 HCRTO43612 131 aa8.01□□□□□ -1.13
RBM39-209ENST00000416529 BEST1O76090 585 aa8.01□□□□□ -1.13
RBM39-209ENST00000416529 MTA2O94776 668 aa8.01□□□□□ -1.13
RBM39-209ENST00000416529 ENDOD1O94919 500 aa8.01□□□□□ -1.13
RBM39-209ENST00000416529 FTLP02792 175 aaPredicted RBP8.01□□□□□ -1.13
RBM39-209ENST00000416529 TMEM253P0C7T8 217 aa8.01□□□□□ -1.13
RBM39-209ENST00000416529 SPATA31D3P0C874 917 aa8.01□□□□□ -1.13
RBM39-209ENST00000416529 KRT3P12035 628 aa8.01□□□□□ -1.13
RBM39-209ENST00000416529 MYL4P12829 197 aa8.01□□□□□ -1.13
RBM39-209ENST00000416529 GTF2F1P35269 517 aaKnown RBP eCLIP8.01□□□□□ -1.13
RBM39-209ENST00000416529 CHKAP35790 457 aa8.01□□□□□ -1.13
RBM39-209ENST00000416529 SLC1A1P43005 524 aa8.01□□□□□ -1.13
RBM39-209ENST00000416529 EPHA4P54764 986 aa8.01□□□□□ -1.13
RBM39-209ENST00000416529 OXCT1P55809 520 aa8.01□□□□□ -1.13
RBM39-209ENST00000416529 PSMA6P60900 246 aaKnown RBP8.01□□□□□ -1.13
RBM39-209ENST00000416529 APBA1Q02410 837 aa8.01□□□□□ -1.13
RBM39-209ENST00000416529 PIGHQ14442 188 aaPredicted RBP8.01□□□□□ -1.13
RBM39-209ENST00000416529 PPP2R5DQ14738 602 aa8.01□□□□□ -1.13
RBM39-209ENST00000416529 PDGFRLQ15198 375 aa8.01□□□□□ -1.13
RBM39-209ENST00000416529 SLC25A52Q3SY17 297 aa8.01□□□□□ -1.13
RBM39-209ENST00000416529 PTPN20Q4JDL3 420 aa8.01□□□□□ -1.13
RBM39-209ENST00000416529 HS1BP3Q53T59 392 aa8.01□□□□□ -1.13
RBM39-209ENST00000416529 MPP7Q5T2T1 576 aa8.01□□□□□ -1.13
RBM39-209ENST00000416529 GPR158Q5T848 1215 aa8.01□□□□□ -1.13
RBM39-209ENST00000416529 NAA35Q5VZE5 725 aa8.01□□□□□ -1.13
RBM39-209ENST00000416529 OLFML1Q6UWY5 402 aa8.01□□□□□ -1.13
RBM39-209ENST00000416529 SPATA31D4Q6ZUB0 917 aa8.01□□□□□ -1.13
RBM39-209ENST00000416529 SND1Q7KZF4 910 aaKnown RBP eCLIP8.01□□□□□ -1.13
RBM39-209ENST00000416529 RSRC2Q7L4I2 434 aaKnown RBP8.01□□□□□ -1.13
RBM39-209ENST00000416529 TMEM150AQ86TG1 271 aa8.01□□□□□ -1.13
RBM39-209ENST00000416529 VSIG1Q86XK7 387 aa8.01□□□□□ -1.13
RBM39-209ENST00000416529 XYLT1Q86Y38 959 aa8.01□□□□□ -1.13
RBM39-209ENST00000416529 MFSD6LQ8IWD5 586 aa8.01□□□□□ -1.13
RBM39-209ENST00000416529 SUGP1Q8IWZ8 645 aaKnown RBP8.01□□□□□ -1.13
RBM39-209ENST00000416529 UBALD2Q8IYN6 164 aa8.01□□□□□ -1.13
RBM39-209ENST00000416529 TMEM130Q8N3G9 435 aa8.01□□□□□ -1.13
RBM39-209ENST00000416529 RNF10Q8N5U6 811 aaKnown RBP8.01□□□□□ -1.13
RBM39-209ENST00000416529 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.01□□□□□ -1.13
RBM39-209ENST00000416529 SHKBP1Q8TBC3 707 aa8.01□□□□□ -1.13
RBM39-209ENST00000416529 GIPC2Q8TF65 315 aa8.01□□□□□ -1.13
RBM39-209ENST00000416529 DNASE1L2Q92874 299 aa8.01□□□□□ -1.13
RBM39-209ENST00000416529 FGF13Q92913 245 aa8.01□□□□□ -1.13
RBM39-209ENST00000416529 ASB16Q96NS5 453 aa8.01□□□□□ -1.13
RBM39-209ENST00000416529 PPP1R9BQ96SB3 815 aa8.01□□□□□ -1.13
RBM39-209ENST00000416529 TBCBQ99426 244 aa8.01□□□□□ -1.13
RBM39-209ENST00000416529 LPIN3Q9BQK8 851 aa8.01□□□□□ -1.13
RBM39-209ENST00000416529 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.01□□□□□ -1.132e-6■□□□□ 8.8
RBM39-209ENST00000416529 DDX23Q9BUQ8 820 aaKnown RBP8.01□□□□□ -1.13
RBM39-209ENST00000416529 SELENOOQ9BVL4 669 aa8.01□□□□□ -1.13
RBM39-209ENST00000416529 ULBP1Q9BZM6 244 aa8.01□□□□□ -1.13
RBM39-209ENST00000416529 TSGA10Q9BZW7 698 aa8.01□□□□□ -1.13
RBM39-209ENST00000416529 NACA2Q9H009 215 aa8.01□□□□□ -1.13
RBM39-209ENST00000416529 SMOC2Q9H3U7 446 aa8.01□□□□□ -1.13
RBM39-209ENST00000416529 C11orf16Q9NQ32 467 aa8.01□□□□□ -1.13
RBM39-209ENST00000416529 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.01□□□□□ -1.131e-6■□□□□ 8.1
RBM39-209ENST00000416529 TDP1Q9NUW8 608 aa8.01□□□□□ -1.13
RBM39-209ENST00000416529 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.01□□□□□ -1.132e-6■■■□□ 18.8
RBM39-209ENST00000416529 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.01□□□□□ -1.13
RBM39-209ENST00000416529 STOML2Q9UJZ1 356 aa8.01□□□□□ -1.13
RBM39-209ENST00000416529 TLR6Q9Y2C9 796 aa8.01□□□□□ -1.13
RBM39-209ENST00000416529 EPN1Q9Y6I3 576 aaPredicted RBP8.01□□□□□ -1.13
RBM39-209ENST00000416529 DOCK6Q96HP0 2047 aa8□□□□□ -1.13
RBM39-209ENST00000416529 PTPRZ1P23471 2315 aaPredicted RBP8□□□□□ -1.13
RBM39-209ENST00000416529 ELOA3CA0A087WX78 387 aaPredicted RBP8□□□□□ -1.13
RBM39-209ENST00000416529 TCRBV5S1A1TA0A578 114 aa8□□□□□ -1.13
RBM39-209ENST00000416529 GOLGA6L9A6NEM1 432 aa8□□□□□ -1.13
RBM39-209ENST00000416529 ELOA3DA6NLF2 546 aaPredicted RBP8□□□□□ -1.13
RBM39-209ENST00000416529 CHADO15335 359 aa8□□□□□ -1.13
RBM39-209ENST00000416529 PJA2O43164 708 aa8□□□□□ -1.13
RBM39-209ENST00000416529 MOSPD3O75425 235 aa8□□□□□ -1.13
RBM39-209ENST00000416529 ZNF189O75820 626 aaPredicted RBP8□□□□□ -1.13
RBM39-209ENST00000416529 NDUFA10O95299 355 aa8□□□□□ -1.13
RBM39-209ENST00000416529 IGLV3-25P01717 112 aa8□□□□□ -1.13
RBM39-209ENST00000416529 CYP1A2P05177 515 aa8□□□□□ -1.13
RBM39-209ENST00000416529 RARGP13631 454 aa8□□□□□ -1.13
RBM39-209ENST00000416529 PSMC3P17980 439 aa8□□□□□ -1.13
RBM39-209ENST00000416529 SDC4P31431 198 aa8□□□□□ -1.13
RBM39-209ENST00000416529 MAN1A1P33908 653 aa8□□□□□ -1.13
RBM39-209ENST00000416529 PCK1P35558 622 aa8□□□□□ -1.13
RBM39-209ENST00000416529 EIF4A3P38919 411 aaKnown RBP8□□□□□ -1.13
RBM39-209ENST00000416529 HARS2P49590 506 aaKnown RBP8□□□□□ -1.13
RBM39-209ENST00000416529 ZNF143P52747 638 aaPredicted RBP8□□□□□ -1.13
RBM39-209ENST00000416529 CACNA2D1P54289 1103 aa8□□□□□ -1.13
RBM39-209ENST00000416529 ADKP55263 362 aaKnown RBP8□□□□□ -1.13
RBM39-209ENST00000416529 NRG1Q02297 640 aaPredicted RBP8□□□□□ -1.13
RBM39-209ENST00000416529 NHLH1Q02575 133 aa8□□□□□ -1.13
RBM39-209ENST00000416529 ARID5AQ03989 594 aa8□□□□□ -1.13
RBM39-209ENST00000416529 DLX2Q07687 328 aaPredicted RBP8□□□□□ -1.13
RBM39-209ENST00000416529 FCHO2Q0JRZ9 810 aa8□□□□□ -1.13
RBM39-209ENST00000416529 PTP4A2Q12974 167 aa8□□□□□ -1.13
RBM39-209ENST00000416529 ORC1Q13415 861 aa8□□□□□ -1.13
RBM39-209ENST00000416529 EIF4EBP2Q13542 120 aaPredicted RBP8□□□□□ -1.13
RBM39-209ENST00000416529 TRIP4Q15650 581 aaPredicted RBP8□□□□□ -1.13
RBM39-209ENST00000416529 HIF1AQ16665 826 aa8□□□□□ -1.13
RBM39-209ENST00000416529 ARL13BQ3SXY8 428 aa8□□□□□ -1.13
RBM39-209ENST00000416529 ELOA3BQ3SY89 546 aa8□□□□□ -1.13
RBM39-209ENST00000416529 CCDC122Q5T0U0 273 aa8□□□□□ -1.13
RBM39-209ENST00000416529 TTC39BQ5VTQ0 682 aaPredicted RBP8□□□□□ -1.13
RBM39-209ENST00000416529 OR6B2Q6IFH4 312 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms