RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 SLC14A1Q13336 389 aa4.21□□□□□ -1.74
HMGB3P23-201ENST00000414981 ATP1A4Q13733 1029 aa4.21□□□□□ -1.74
HMGB3P23-201ENST00000414981 KCTD2Q14681 263 aa4.21□□□□□ -1.74
HMGB3P23-201ENST00000414981 SEC23BQ15437 767 aa4.21□□□□□ -1.74
HMGB3P23-201ENST00000414981 ARL13BQ3SXY8 428 aa4.21□□□□□ -1.74
HMGB3P23-201ENST00000414981 AWAT1Q58HT5 328 aa4.21□□□□□ -1.74
HMGB3P23-201ENST00000414981 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.21□□□□□ -1.74
HMGB3P23-201ENST00000414981 EPHA10Q5JZY3 1008 aa4.21□□□□□ -1.74
HMGB3P23-201ENST00000414981 CRTC1Q6UUV9 634 aa4.21□□□□□ -1.74
HMGB3P23-201ENST00000414981 CCDC33Q8N5R6 958 aa4.21□□□□□ -1.74
HMGB3P23-201ENST00000414981 CUL5Q93034 780 aa4.21□□□□□ -1.74
HMGB3P23-201ENST00000414981 ZNF622Q969S3 477 aaKnown RBP eCLIP4.21□□□□□ -1.74
HMGB3P23-201ENST00000414981 LRRC46Q96FV0 321 aa4.21□□□□□ -1.74
HMGB3P23-201ENST00000414981 NUDT22Q9BRQ3 303 aa4.21□□□□□ -1.74
HMGB3P23-201ENST00000414981 SPRTNQ9H040 489 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P23-201ENST00000414981 SAP30LQ9HAJ7 183 aa4.21□□□□□ -1.74
HMGB3P23-201ENST00000414981 AS3MTQ9HBK9 375 aa4.21□□□□□ -1.74
HMGB3P23-201ENST00000414981 ELOVL5Q9NYP7 299 aa4.21□□□□□ -1.74
HMGB3P23-201ENST00000414981 ZMYND8Q9ULU4 1186 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P23-201ENST00000414981 NINLQ9Y2I6 1382 aa4.21□□□□□ -1.74
HMGB3P23-201ENST00000414981 ABCC5O15440 1437 aa4.21□□□□□ -1.74
HMGB3P23-201ENST00000414981 BLMP54132 1417 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P23-201ENST00000414981 E9PCH4 1651 aa4.2□□□□□ -1.74
HMGB3P23-201ENST00000414981 CAMSAP2Q08AD1 1489 aa4.2□□□□□ -1.74
HMGB3P23-201ENST00000414981 SHANK2Q9UPX8 1470 aa4.2□□□□□ -1.74
HMGB3P23-201ENST00000414981 ANKRD30AQ9BXX3 1397 aa4.2□□□□□ -1.74
HMGB3P23-201ENST00000414981 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.2□□□□□ -1.74
HMGB3P23-201ENST00000414981 CLGNO14967 610 aa4.2□□□□□ -1.74
HMGB3P23-201ENST00000414981 PMM2O15305 246 aa4.2□□□□□ -1.74
HMGB3P23-201ENST00000414981 CAND2O75155 1236 aa4.2□□□□□ -1.74
HMGB3P23-201ENST00000414981 USP12O75317 370 aa4.2□□□□□ -1.74
HMGB3P23-201ENST00000414981 FGF18O76093 207 aa4.2□□□□□ -1.74
HMGB3P23-201ENST00000414981 CD63P08962 238 aa4.2□□□□□ -1.74
HMGB3P23-201ENST00000414981 VDRP11473 427 aa4.2□□□□□ -1.74
HMGB3P23-201ENST00000414981 GABRB3P28472 473 aa4.2□□□□□ -1.74
HMGB3P23-201ENST00000414981 TACR3P29371 465 aa4.2□□□□□ -1.74
HMGB3P23-201ENST00000414981 GALNSP34059 522 aa4.2□□□□□ -1.74
HMGB3P23-201ENST00000414981 PBX1P40424 430 aa4.2□□□□□ -1.74
HMGB3P23-201ENST00000414981 PLCD1P51178 756 aa4.2□□□□□ -1.74
HMGB3P23-201ENST00000414981 GPS1Q13098 491 aa4.2□□□□□ -1.74
HMGB3P23-201ENST00000414981 Q4G0T1 1027 aa4.2□□□□□ -1.74
HMGB3P23-201ENST00000414981 EARS2Q5JPH6 523 aaKnown RBP4.2□□□□□ -1.74
HMGB3P23-201ENST00000414981 CC2D1BQ5T0F9 858 aaKnown RBP4.2□□□□□ -1.74
HMGB3P23-201ENST00000414981 C10orf62Q5T681 223 aaPredicted RBP4.2□□□□□ -1.74
HMGB3P23-201ENST00000414981 C10orf25Q5T742 122 aa4.2□□□□□ -1.74
HMGB3P23-201ENST00000414981 C1QTNF12Q5T7M4 302 aa4.2□□□□□ -1.74
HMGB3P23-201ENST00000414981 FAM90A2PQ658T7 463 aa4.2□□□□□ -1.74
HMGB3P23-201ENST00000414981 CASC1Q6TDU7 716 aa4.2□□□□□ -1.74
HMGB3P23-201ENST00000414981 GLCCI1Q86VQ1 547 aa4.2□□□□□ -1.74
HMGB3P23-201ENST00000414981 P3H2Q8IVL5 708 aa4.2□□□□□ -1.74
HMGB3P23-201ENST00000414981 CCDC28AQ8IWP9 274 aa4.2□□□□□ -1.74
HMGB3P23-201ENST00000414981 NANOGP1Q8N7R0 232 aa4.2□□□□□ -1.74
HMGB3P23-201ENST00000414981 HMCESQ96FZ2 354 aa4.2□□□□□ -1.74
HMGB3P23-201ENST00000414981 PRR11Q96HE9 360 aaPredicted RBP4.2□□□□□ -1.74
HMGB3P23-201ENST00000414981 ZNF48Q96MX3 618 aaPredicted RBP4.2□□□□□ -1.74
HMGB3P23-201ENST00000414981 NUAK2Q9H093 628 aa4.2□□□□□ -1.74
HMGB3P23-201ENST00000414981 RSPH9Q9H1X1 276 aaPredicted RBP4.2□□□□□ -1.74
HMGB3P23-201ENST00000414981 ZHX3Q9H4I2 956 aa4.2□□□□□ -1.74
HMGB3P23-201ENST00000414981 TMEM8AQ9HCN3 771 aa4.2□□□□□ -1.74
HMGB3P23-201ENST00000414981 MAN2B2Q9Y2E5 1009 aa4.2□□□□□ -1.74
HMGB3P23-201ENST00000414981 LRRIQ1Q96JM4 1722 aa4.2□□□□□ -1.74
HMGB3P23-201ENST00000414981 NESP48681 1621 aa4.2□□□□□ -1.74
HMGB3P23-201ENST00000414981 CLASP1Q7Z460 1538 aa4.2□□□□□ -1.74
HMGB3P23-201ENST00000414981 PZPP20742 1482 aa4.19□□□□□ -1.74
HMGB3P23-201ENST00000414981 GPRASP1Q5JY77 1395 aa4.19□□□□□ -1.74
HMGB3P23-201ENST00000414981 NPC1L1Q9UHC9 1359 aa4.19□□□□□ -1.74
HMGB3P23-201ENST00000414981 TTC34A8MYJ7 566 aa4.19□□□□□ -1.74
HMGB3P23-201ENST00000414981 ZSCAN9O15535 394 aaPredicted RBP4.19□□□□□ -1.74
HMGB3P23-201ENST00000414981 TLR2O60603 784 aa4.19□□□□□ -1.74
HMGB3P23-201ENST00000414981 CNOT3O75175 753 aaKnown RBP4.19□□□□□ -1.74
HMGB3P23-201ENST00000414981 HSP90AA1P07900 732 aaKnown RBP4.19□□□□□ -1.74
HMGB3P23-201ENST00000414981 TMEM191BP0C7N4 346 aa4.19□□□□□ -1.74
HMGB3P23-201ENST00000414981 CTSAP10619 480 aa4.19□□□□□ -1.74
HMGB3P23-201ENST00000414981 HOXD9P28356 352 aaPredicted RBP4.19□□□□□ -1.74
HMGB3P23-201ENST00000414981 RPS13P62277 151 aaKnown RBP4.19□□□□□ -1.74
HMGB3P23-201ENST00000414981 CFHR1Q03591 330 aa4.19□□□□□ -1.74
HMGB3P23-201ENST00000414981 SEMA3BQ13214 749 aa4.19□□□□□ -1.74
HMGB3P23-201ENST00000414981 STIM1Q13586 685 aa4.19□□□□□ -1.74
HMGB3P23-201ENST00000414981 BECN1Q14457 450 aa4.19□□□□□ -1.74
HMGB3P23-201ENST00000414981 RABEP1Q15276 862 aa4.19□□□□□ -1.74
HMGB3P23-201ENST00000414981 ZRSR2Q15696 482 aaKnown RBP4.19□□□□□ -1.74
HMGB3P23-201ENST00000414981 MAPKAPK3Q16644 382 aa4.19□□□□□ -1.74
HMGB3P23-201ENST00000414981 LONRF1Q17RB8 773 aa4.19□□□□□ -1.74
HMGB3P23-201ENST00000414981 SLC5A9Q2M3M2 681 aa4.19□□□□□ -1.74
HMGB3P23-201ENST00000414981 TMEM95Q3KNT9 176 aa4.19□□□□□ -1.74
HMGB3P23-201ENST00000414981 FAM209BQ5JX69 171 aa4.19□□□□□ -1.74
HMGB3P23-201ENST00000414981 RAP1GAP2Q684P5 730 aa4.19□□□□□ -1.74
HMGB3P23-201ENST00000414981 HIBCHQ6NVY1 386 aaPredicted RBP4.19□□□□□ -1.74
HMGB3P23-201ENST00000414981 CCDC174Q6PII3 467 aa4.19□□□□□ -1.74
HMGB3P23-201ENST00000414981 CLASRPQ8N2M8 674 aaKnown RBP4.19□□□□□ -1.74
HMGB3P23-201ENST00000414981 EXOC6Q8TAG9 804 aa4.19□□□□□ -1.74
HMGB3P23-201ENST00000414981 PPM1EQ8WY54 764 aa4.19□□□□□ -1.74
HMGB3P23-201ENST00000414981 RNF26Q9BY78 433 aaPredicted RBP4.19□□□□□ -1.74
HMGB3P23-201ENST00000414981 KRTAP9-8Q9BYQ0 159 aa4.19□□□□□ -1.74
HMGB3P23-201ENST00000414981 PCDHAC1Q9H158 963 aa4.19□□□□□ -1.74
HMGB3P23-201ENST00000414981 GJB4Q9NTQ9 266 aa4.19□□□□□ -1.74
HMGB3P23-201ENST00000414981 ANAPC4Q9UJX5 808 aa4.19□□□□□ -1.74
HMGB3P23-201ENST00000414981 LZTS1Q9Y250 596 aa4.19□□□□□ -1.74
HMGB3P23-201ENST00000414981 MAGI3Q5TCQ9 1506 aa4.19□□□□□ -1.74
HMGB3P23-201ENST00000414981 NUP160Q12769 1436 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms