RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 FAM72CH0Y354 149 aa16.07■□□□□ 0.16
SHMT2-202ENST00000414700 SOX1O00570 391 aaPredicted RBP16.07■□□□□ 0.16
SHMT2-202ENST00000414700 KIAA0754O94854 1291 aa16.07■□□□□ 0.16
SHMT2-202ENST00000414700 C1RP00736 705 aa16.07■□□□□ 0.16
SHMT2-202ENST00000414700 IL4RP24394 825 aa16.07■□□□□ 0.16
SHMT2-202ENST00000414700 L1CAMP32004 1257 aa16.07■□□□□ 0.16
SHMT2-202ENST00000414700 GBP1P32455 592 aa16.07■□□□□ 0.16
SHMT2-202ENST00000414700 CDKN2BP42772 138 aa16.07■□□□□ 0.16
SHMT2-202ENST00000414700 SKOR1P84550 965 aa16.07■□□□□ 0.16
SHMT2-202ENST00000414700 HYAL1Q12794 435 aa16.07■□□□□ 0.16
SHMT2-202ENST00000414700 DPYSL3Q14195 570 aa16.07■□□□□ 0.16
SHMT2-202ENST00000414700 GRIN2CQ14957 1233 aa16.07■□□□□ 0.16
SHMT2-202ENST00000414700 KCTD19Q17RG1 926 aaPredicted RBP16.07■□□□□ 0.16
SHMT2-202ENST00000414700 TCEAL5Q5H9L2 206 aa16.07■□□□□ 0.16
SHMT2-202ENST00000414700 CCDC181Q5TID7 509 aa16.07■□□□□ 0.16
SHMT2-202ENST00000414700 FAM72AQ5TYM5 149 aa16.07■□□□□ 0.16
SHMT2-202ENST00000414700 KAZNQ674X7 775 aa16.07■□□□□ 0.16
SHMT2-202ENST00000414700 FAM72DQ6L9T8 149 aa16.07■□□□□ 0.16
SHMT2-202ENST00000414700 TMC5Q6UXY8 1006 aa16.07■□□□□ 0.16
SHMT2-202ENST00000414700 SPOCD1Q6ZMY3 1216 aa16.07■□□□□ 0.16
SHMT2-202ENST00000414700 FAM72BQ86X60 149 aa16.07■□□□□ 0.16
SHMT2-202ENST00000414700 RCOR2Q8IZ40 523 aa16.07■□□□□ 0.16
SHMT2-202ENST00000414700 AENQ8WTP8 325 aaKnown RBP16.07■□□□□ 0.16
SHMT2-202ENST00000414700 TEKT4Q8WW24 435 aa16.07■□□□□ 0.16
SHMT2-202ENST00000414700 RUBCNQ92622 972 aa16.07■□□□□ 0.16
SHMT2-202ENST00000414700 RNF34Q969K3 372 aa16.07■□□□□ 0.16
SHMT2-202ENST00000414700 SLC39A13Q96H72 371 aa16.07■□□□□ 0.16
SHMT2-202ENST00000414700 SERPINB11Q96P15 392 aa16.07■□□□□ 0.16
SHMT2-202ENST00000414700 AP1M1Q9BXS5 423 aa16.07■□□□□ 0.16
SHMT2-202ENST00000414700 PCDH18Q9HCL0 1135 aa16.07■□□□□ 0.16
SHMT2-202ENST00000414700 ASAH2Q9NR71 780 aa16.07■□□□□ 0.16
SHMT2-202ENST00000414700 CDH22Q9UJ99 828 aa16.07■□□□□ 0.16
SHMT2-202ENST00000414700 SLC12A8A0AV02 714 aa16.07■□□□□ 0.16
SHMT2-202ENST00000414700 PGRMC1O00264 195 aaKnown RBP16.07■□□□□ 0.16
SHMT2-202ENST00000414700 OPA1O60313 960 aa16.07■□□□□ 0.16
SHMT2-202ENST00000414700 HOXA9P31269 272 aa16.07■□□□□ 0.16
SHMT2-202ENST00000414700 ATP5C1P36542 298 aaKnown RBP16.07■□□□□ 0.16
SHMT2-202ENST00000414700 KCNQ1P51787 676 aa16.07■□□□□ 0.16
SHMT2-202ENST00000414700 DPYSL2Q16555 572 aa16.07■□□□□ 0.16
SHMT2-202ENST00000414700 GRASPQ7Z6J2 395 aaPredicted RBP16.07■□□□□ 0.16
SHMT2-202ENST00000414700 FCRL2Q96LA5 508 aaPredicted RBP16.07■□□□□ 0.16
SHMT2-202ENST00000414700 KCTD15Q96SI1 283 aaPredicted RBP16.07■□□□□ 0.16
SHMT2-202ENST00000414700 OSBPL8Q9BZF1 889 aa16.07■□□□□ 0.16
SHMT2-202ENST00000414700 ATXN3LQ9H3M9 355 aa16.07■□□□□ 0.16
SHMT2-202ENST00000414700 OLA1Q9NTK5 396 aaKnown RBP16.07■□□□□ 0.16
SHMT2-202ENST00000414700 TLR6Q9Y2C9 796 aa16.07■□□□□ 0.16
SHMT2-202ENST00000414700 MOCS2O96007 188 aaPredicted RBP16.06■□□□□ 0.16
SHMT2-202ENST00000414700 RHOP08100 348 aa16.06■□□□□ 0.16
SHMT2-202ENST00000414700 CCR1P32246 355 aa16.06■□□□□ 0.16
SHMT2-202ENST00000414700 TBX4P57082 545 aa16.06■□□□□ 0.16
SHMT2-202ENST00000414700 ZXDBP98169 803 aa16.06■□□□□ 0.16
SHMT2-202ENST00000414700 ODF2Q5BJF6 829 aa16.06■□□□□ 0.16
SHMT2-202ENST00000414700 SND1Q7KZF4 910 aaKnown RBP eCLIP16.06■□□□□ 0.162e-6■■□□□ 11.8
SHMT2-202ENST00000414700 SLC13A5Q86YT5 568 aaPredicted RBP16.06■□□□□ 0.16
SHMT2-202ENST00000414700 ZNF276Q8N554 614 aa16.06■□□□□ 0.16
SHMT2-202ENST00000414700 ARL14EPQ8N8R7 260 aaPredicted RBP16.06■□□□□ 0.16
SHMT2-202ENST00000414700 MAB21L3Q8N8X9 362 aa16.06■□□□□ 0.16
SHMT2-202ENST00000414700 HDAC7Q8WUI4 952 aa16.06■□□□□ 0.16
SHMT2-202ENST00000414700 RBM41Q96IZ5 413 aaKnown RBP16.06■□□□□ 0.16
SHMT2-202ENST00000414700 APOL5Q9BWW9 433 aa16.06■□□□□ 0.16
SHMT2-202ENST00000414700 PRKD2Q9BZL6 878 aa16.06■□□□□ 0.16
SHMT2-202ENST00000414700 NACA2Q9H009 215 aa16.06■□□□□ 0.16
SHMT2-202ENST00000414700 GKN1Q9NS71 199 aa16.06■□□□□ 0.16
SHMT2-202ENST00000414700 ZDHHC7Q9NXF8 308 aa16.06■□□□□ 0.16
SHMT2-202ENST00000414700 ARHGEF38Q9NXL2 777 aa16.06■□□□□ 0.16
SHMT2-202ENST00000414700 DNMT3LQ9UJW3 386 aa16.06■□□□□ 0.16
SHMT2-202ENST00000414700 hCG_1818297A0A087WSY0 165 aa16.06■□□□□ 0.16
SHMT2-202ENST00000414700 MOSPD3O75425 235 aa16.06■□□□□ 0.16
SHMT2-202ENST00000414700 HNRNPA1P09651 372 aaKnown RBP eCLIP16.06■□□□□ 0.16
SHMT2-202ENST00000414700 MYBL2P10244 700 aa16.06■□□□□ 0.16
SHMT2-202ENST00000414700 PTPN2P17706 415 aa16.06■□□□□ 0.16
SHMT2-202ENST00000414700 PPP3CCP48454 512 aa16.06■□□□□ 0.16
SHMT2-202ENST00000414700 C2orf54Q08AI8 447 aa16.06■□□□□ 0.16
SHMT2-202ENST00000414700 KRT81Q14533 505 aa16.06■□□□□ 0.16
SHMT2-202ENST00000414700 PABPC1LQ4VXU2 614 aaKnown RBP16.06■□□□□ 0.16
SHMT2-202ENST00000414700 TFDP3Q5H9I0 405 aa16.06■□□□□ 0.16
SHMT2-202ENST00000414700 CCDC70Q6NSX1 233 aa16.06■□□□□ 0.16
SHMT2-202ENST00000414700 POTEHQ6S545 545 aa16.06■□□□□ 0.16
SHMT2-202ENST00000414700 RTL10Q7L3V2 364 aa16.06■□□□□ 0.16
SHMT2-202ENST00000414700 GSPT2Q8IYD1 628 aaKnown RBP16.06■□□□□ 0.16
SHMT2-202ENST00000414700 GIMAP7Q8NHV1 300 aa16.06■□□□□ 0.16
SHMT2-202ENST00000414700 SHKBP1Q8TBC3 707 aa16.06■□□□□ 0.16
SHMT2-202ENST00000414700 WBP2Q969T9 261 aa16.06■□□□□ 0.16
SHMT2-202ENST00000414700 NTAN1Q96AB6 310 aa16.06■□□□□ 0.16
SHMT2-202ENST00000414700 LRCH3Q96II8 777 aa16.06■□□□□ 0.16
SHMT2-202ENST00000414700 FAM161BQ96MY7 647 aa16.06■□□□□ 0.16
SHMT2-202ENST00000414700 GDAP1L1Q96MZ0 367 aa16.06■□□□□ 0.16
SHMT2-202ENST00000414700 NSUN3Q9H649 340 aaKnown RBP16.06■□□□□ 0.16
SHMT2-202ENST00000414700 SMPD4Q9NXE4 827 aa16.06■□□□□ 0.16
SHMT2-202ENST00000414700 TTC7AQ9ULT0 858 aaPredicted RBP16.06■□□□□ 0.16
SHMT2-202ENST00000414700 A0A1W2PPC1 479 aa16.05■□□□□ 0.16
SHMT2-202ENST00000414700 KCNU1A8MYU2 1149 aa16.05■□□□□ 0.16
SHMT2-202ENST00000414700 H0YHG0 523 aa16.05■□□□□ 0.16
SHMT2-202ENST00000414700 PAGE1O75459 146 aa16.05■□□□□ 0.16
SHMT2-202ENST00000414700 IGLV3-27P01718 113 aa16.05■□□□□ 0.16
SHMT2-202ENST00000414700 GOT1P17174 413 aa16.05■□□□□ 0.16
SHMT2-202ENST00000414700 PAFAH1B1P43034 410 aa16.05■□□□□ 0.16
SHMT2-202ENST00000414700 TUBP50607 506 aa16.05■□□□□ 0.16
SHMT2-202ENST00000414700 EPHA5P54756 1037 aa16.05■□□□□ 0.16
SHMT2-202ENST00000414700 SCAPQ12770 1279 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms