RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 SORCS3Q9UPU3 1222 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 CLIC4Q9Y696 253 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 SCN1AP35498 2009 aa5.68□□□□□ -1.5
LINC00342-201ENST00000412393 ZDBF2Q9HCK1 2354 aa5.67□□□□□ -1.5
LINC00342-201ENST00000412393 MUC6Q6W4X9 2439 aa5.67□□□□□ -1.5
LINC00342-201ENST00000412393 A6NNZ2 444 aa5.67□□□□□ -1.5
LINC00342-201ENST00000412393 H0YCG3 227 aa5.67□□□□□ -1.5
LINC00342-201ENST00000412393 I3L4J1 428 aa5.67□□□□□ -1.5
LINC00342-201ENST00000412393 MYO1CO00159 1063 aa5.67□□□□□ -1.5
LINC00342-201ENST00000412393 CLDN3O15551 220 aa5.67□□□□□ -1.5
LINC00342-201ENST00000412393 TRAPPC3O43617 180 aa5.67□□□□□ -1.5
LINC00342-201ENST00000412393 TBCAO75347 108 aaKnown RBP5.67□□□□□ -1.5
LINC00342-201ENST00000412393 TOM1L1O75674 476 aa5.67□□□□□ -1.5
LINC00342-201ENST00000412393 CLTAP09496 248 aa5.67□□□□□ -1.5
LINC00342-201ENST00000412393 KCNE1P15382 129 aa5.67□□□□□ -1.5
LINC00342-201ENST00000412393 CMA1P23946 247 aa5.67□□□□□ -1.5
LINC00342-201ENST00000412393 TKTP29401 623 aaKnown RBP5.67□□□□□ -1.5
LINC00342-201ENST00000412393 THBS2P35442 1172 aa5.67□□□□□ -1.5
LINC00342-201ENST00000412393 PLA2G5P39877 138 aa5.67□□□□□ -1.5
LINC00342-201ENST00000412393 BRCC3P46736 316 aa5.67□□□□□ -1.5
LINC00342-201ENST00000412393 LIG4P49917 911 aa5.67□□□□□ -1.5
LINC00342-201ENST00000412393 CEBPZQ03701 1054 aaKnown RBP5.67□□□□□ -1.5
LINC00342-201ENST00000412393 SIGLEC14Q08ET2 396 aa5.67□□□□□ -1.5
LINC00342-201ENST00000412393 UPP1Q16831 310 aa5.67□□□□□ -1.5
LINC00342-201ENST00000412393 SLC10A6Q3KNW5 377 aa5.67□□□□□ -1.5
LINC00342-201ENST00000412393 TUBB8Q3ZCM7 444 aa5.67□□□□□ -1.5
LINC00342-201ENST00000412393 SEZ6Q53EL9 994 aa5.67□□□□□ -1.5
LINC00342-201ENST00000412393 SPECC1Q5M775 1068 aa5.67□□□□□ -1.5
LINC00342-201ENST00000412393 LIN9Q5TKA1 542 aa5.67□□□□□ -1.5
LINC00342-201ENST00000412393 ICE2Q659A1 982 aa5.67□□□□□ -1.5
LINC00342-201ENST00000412393 FAM173BQ6P4H8 233 aa5.67□□□□□ -1.5
LINC00342-201ENST00000412393 ALKAL1Q6UXT8 129 aa5.67□□□□□ -1.5
LINC00342-201ENST00000412393 C11orf57Q6ZUT1 292 aaPredicted RBP5.67□□□□□ -1.5
LINC00342-201ENST00000412393 USP49Q70CQ1 688 aa5.67□□□□□ -1.5
LINC00342-201ENST00000412393 SRLQ86TD4 932 aa5.67□□□□□ -1.5
LINC00342-201ENST00000412393 MYCT1Q8N699 235 aa5.67□□□□□ -1.5
LINC00342-201ENST00000412393 LNX1Q8TBB1 728 aaPredicted RBP5.67□□□□□ -1.5
LINC00342-201ENST00000412393 KCNG4Q8TDN1 519 aa5.67□□□□□ -1.5
LINC00342-201ENST00000412393 LRRC15Q8TF66 581 aa5.67□□□□□ -1.5
LINC00342-201ENST00000412393 SMG7Q92540 1137 aaKnown RBP5.67□□□□□ -1.5
LINC00342-201ENST00000412393 LARP4BQ92615 738 aaKnown RBP5.67□□□□□ -1.5
LINC00342-201ENST00000412393 STAMQ92783 540 aa5.67□□□□□ -1.5
LINC00342-201ENST00000412393 ZNF707Q96C28 371 aaPredicted RBP5.67□□□□□ -1.5
LINC00342-201ENST00000412393 BICD1Q96G01 975 aa5.67□□□□□ -1.5
LINC00342-201ENST00000412393 EPSTI1Q96J88 318 aa5.67□□□□□ -1.5
LINC00342-201ENST00000412393 ZMAT2Q96NC0 199 aaKnown RBP5.67□□□□□ -1.5
LINC00342-201ENST00000412393 USP28Q96RU2 1077 aa5.67□□□□□ -1.5
LINC00342-201ENST00000412393 CLSTN3Q9BQT9 956 aa5.67□□□□□ -1.5
LINC00342-201ENST00000412393 RHOBTB2Q9BYZ6 727 aa5.67□□□□□ -1.5
LINC00342-201ENST00000412393 FAM107BQ9H098 131 aa5.67□□□□□ -1.5
LINC00342-201ENST00000412393 PARVGQ9HBI0 331 aa5.67□□□□□ -1.5
LINC00342-201ENST00000412393 WDR6Q9NNW5 1121 aaKnown RBP5.67□□□□□ -1.5
LINC00342-201ENST00000412393 ZDHHC7Q9NXF8 308 aa5.67□□□□□ -1.5
LINC00342-201ENST00000412393 SUCOQ9UBS9 1254 aaKnown RBP5.67□□□□□ -1.5
LINC00342-201ENST00000412393 FBXO2Q9UK22 296 aaPredicted RBP5.67□□□□□ -1.5
LINC00342-201ENST00000412393 FBXW11Q9UKB1 542 aa5.67□□□□□ -1.5
LINC00342-201ENST00000412393 L1RE1Q9UN81 338 aa5.67□□□□□ -1.5
LINC00342-201ENST00000412393 SRPRBQ9Y5M8 271 aaKnown RBP5.67□□□□□ -1.5
LINC00342-201ENST00000412393 ZNF638Q14966 1978 aaKnown RBP5.67□□□□□ -1.5
LINC00342-201ENST00000412393 CLUHO75153 1309 aa5.67□□□□□ -1.5
LINC00342-201ENST00000412393 TRIOO75962 3097 aa5.66□□□□□ -1.5
LINC00342-201ENST00000412393 MIA3Q5JRA6 1907 aa5.66□□□□□ -1.5
LINC00342-201ENST00000412393 K7ENM7 598 aa5.66□□□□□ -1.5
LINC00342-201ENST00000412393 PODXLO00592 558 aa5.66□□□□□ -1.5
LINC00342-201ENST00000412393 HNRNPDLO14979 420 aaKnown RBP5.66□□□□□ -1.5
LINC00342-201ENST00000412393 MEFVO15553 781 aaPredicted RBP5.66□□□□□ -1.5
LINC00342-201ENST00000412393 ADAM12O43184 909 aa5.66□□□□□ -1.5
LINC00342-201ENST00000412393 GREM1O60565 184 aa5.66□□□□□ -1.5
LINC00342-201ENST00000412393 CLSTN1O94985 981 aa5.66□□□□□ -1.5
LINC00342-201ENST00000412393 PIGRP01833 764 aa5.66□□□□□ -1.5
LINC00342-201ENST00000412393 HNRNPA1P09651 372 aaKnown RBP eCLIP5.66□□□□□ -1.5
LINC00342-201ENST00000412393 CXCL8P10145 99 aa5.66□□□□□ -1.5
LINC00342-201ENST00000412393 SCP2P22307 547 aa5.66□□□□□ -1.5
LINC00342-201ENST00000412393 TACR1P25103 407 aa5.66□□□□□ -1.5
LINC00342-201ENST00000412393 RPL9P32969 192 aaKnown RBP5.66□□□□□ -1.5
LINC00342-201ENST00000412393 ABCD1P33897 745 aa5.66□□□□□ -1.5
LINC00342-201ENST00000412393 OR1D2P34982 312 aa5.66□□□□□ -1.5
LINC00342-201ENST00000412393 ZNF131P52739 623 aa5.66□□□□□ -1.5
LINC00342-201ENST00000412393 GSCP56915 257 aaPredicted RBP5.66□□□□□ -1.5
LINC00342-201ENST00000412393 MCL1Q07820 350 aa5.66□□□□□ -1.5
LINC00342-201ENST00000412393 RAB33AQ14088 237 aa5.66□□□□□ -1.5
LINC00342-201ENST00000412393 KYAT1Q16773 422 aa5.66□□□□□ -1.5
LINC00342-201ENST00000412393 PPM1LQ5SGD2 360 aa5.66□□□□□ -1.5
LINC00342-201ENST00000412393 RRAGBQ5VZM2 374 aa5.66□□□□□ -1.5
LINC00342-201ENST00000412393 CD300LGQ6UXG3 332 aa5.66□□□□□ -1.5
LINC00342-201ENST00000412393 SYT10Q6XYQ8 523 aa5.66□□□□□ -1.5
LINC00342-201ENST00000412393 ANKS3Q6ZW76 656 aa5.66□□□□□ -1.5
LINC00342-201ENST00000412393 TMEM139Q8IV31 216 aa5.66□□□□□ -1.5
LINC00342-201ENST00000412393 VSTM4Q8IW00 320 aa5.66□□□□□ -1.5
LINC00342-201ENST00000412393 UBALD2Q8IYN6 164 aa5.66□□□□□ -1.5
LINC00342-201ENST00000412393 KYQ8NBH2 561 aa5.66□□□□□ -1.5
LINC00342-201ENST00000412393 LINC00301Q8NCQ3 95 aa5.66□□□□□ -1.5
LINC00342-201ENST00000412393 C18orf25Q96B23 403 aaPredicted RBP5.66□□□□□ -1.5
LINC00342-201ENST00000412393 LCORQ96JN0 433 aaPredicted RBP5.66□□□□□ -1.5
LINC00342-201ENST00000412393 CLIC6Q96NY7 704 aa5.66□□□□□ -1.5
LINC00342-201ENST00000412393 MYADMQ96S97 322 aa5.66□□□□□ -1.5
LINC00342-201ENST00000412393 HAPLN2Q9GZV7 340 aa5.66□□□□□ -1.5
LINC00342-201ENST00000412393 KCNH6Q9H252 994 aa5.66□□□□□ -1.5
LINC00342-201ENST00000412393 HSD3B7Q9H2F3 369 aa5.66□□□□□ -1.5
LINC00342-201ENST00000412393 SMOC2Q9H3U7 446 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms