RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 SNX24Q9Y343 169 aa12.02□□□□□ -0.49
SNRNP35-202ENST00000412157 HEY1Q9Y5J3 304 aa12.02□□□□□ -0.49
SNRNP35-202ENST00000412157 SLC12A8A0AV02 714 aa12.01□□□□□ -0.49
SNRNP35-202ENST00000412157 ATP8B1O43520 1251 aa12.01□□□□□ -0.49
SNRNP35-202ENST00000412157 ZNF189O75820 626 aaPredicted RBP12.01□□□□□ -0.49
SNRNP35-202ENST00000412157 MOCS2O96007 188 aaPredicted RBP12.01□□□□□ -0.49
SNRNP35-202ENST00000412157 LRG1P02750 347 aa12.01□□□□□ -0.49
SNRNP35-202ENST00000412157 RB1P06400 928 aa12.01□□□□□ -0.49
SNRNP35-202ENST00000412157 KLRC2P26717 231 aa12.01□□□□□ -0.49
SNRNP35-202ENST00000412157 HTR7P34969 479 aa12.01□□□□□ -0.49
SNRNP35-202ENST00000412157 PPP3CCP48454 512 aa12.01□□□□□ -0.49
SNRNP35-202ENST00000412157 HCAR3P49019 387 aa12.01□□□□□ -0.49
SNRNP35-202ENST00000412157 PGFP49763 221 aa12.01□□□□□ -0.49
SNRNP35-202ENST00000412157 KPNA1P52294 538 aaPredicted RBP12.01□□□□□ -0.49
SNRNP35-202ENST00000412157 MTA1Q13330 715 aa12.01□□□□□ -0.49
SNRNP35-202ENST00000412157 XRCC4Q13426 336 aa12.01□□□□□ -0.49
SNRNP35-202ENST00000412157 EIF4EBP2Q13542 120 aaPredicted RBP12.01□□□□□ -0.49
SNRNP35-202ENST00000412157 TRIP13Q15645 432 aaPredicted RBP12.01□□□□□ -0.49
SNRNP35-202ENST00000412157 NCBP2-AS2Q69YL0 99 aa12.01□□□□□ -0.49
SNRNP35-202ENST00000412157 HDXQ7Z353 690 aa12.01□□□□□ -0.49
SNRNP35-202ENST00000412157 ZC3H18Q86VM9 953 aaKnown RBP12.01□□□□□ -0.49
SNRNP35-202ENST00000412157 POF1BQ8WVV4 589 aa12.01□□□□□ -0.49
SNRNP35-202ENST00000412157 CAVIN3Q969G5 261 aa12.01□□□□□ -0.49
SNRNP35-202ENST00000412157 LRRC45Q96CN5 670 aa12.01□□□□□ -0.49
SNRNP35-202ENST00000412157 KLHL5Q96PQ7 755 aa12.01□□□□□ -0.49
SNRNP35-202ENST00000412157 FERMT1Q9BQL6 677 aa12.01□□□□□ -0.49
SNRNP35-202ENST00000412157 C17orf80Q9BSJ5 609 aa12.01□□□□□ -0.49
SNRNP35-202ENST00000412157 TMEM121Q9BTD3 319 aa12.01□□□□□ -0.49
SNRNP35-202ENST00000412157 MAGEB5Q9BZ81 275 aa12.01□□□□□ -0.49
SNRNP35-202ENST00000412157 TTYH1Q9H313 450 aaPredicted RBP12.01□□□□□ -0.49
SNRNP35-202ENST00000412157 ACBD3Q9H3P7 528 aa12.01□□□□□ -0.49
SNRNP35-202ENST00000412157 PCDH9Q9HC56 1237 aa12.01□□□□□ -0.49
SNRNP35-202ENST00000412157 ALG13Q9NP73 1137 aaKnown RBP12.01□□□□□ -0.49
SNRNP35-202ENST00000412157 ARHGEF4Q9NR80 690 aa12.01□□□□□ -0.49
SNRNP35-202ENST00000412157 WHRNQ9P202 907 aa12.01□□□□□ -0.49
SNRNP35-202ENST00000412157 SAE1Q9UBE0 346 aaPredicted RBP12.01□□□□□ -0.49
SNRNP35-202ENST00000412157 ASB3Q9Y575 518 aa12.01□□□□□ -0.49
SNRNP35-202ENST00000412157 ATG2AQ2TAZ0 1938 aa12.01□□□□□ -0.49
SNRNP35-202ENST00000412157 C5orf67F2Z3F1 127 aa12□□□□□ -0.49
SNRNP35-202ENST00000412157 TGM5O43548 720 aa12□□□□□ -0.49
SNRNP35-202ENST00000412157 TLR5O60602 858 aa12□□□□□ -0.49
SNRNP35-202ENST00000412157 PAGE1O75459 146 aa12□□□□□ -0.49
SNRNP35-202ENST00000412157 CSPG5O95196 566 aa12□□□□□ -0.49
SNRNP35-202ENST00000412157 GLUD1P00367 558 aa12□□□□□ -0.49
SNRNP35-202ENST00000412157 IFNB1P01574 187 aa12□□□□□ -0.49
SNRNP35-202ENST00000412157 SERPINB6P35237 376 aa12□□□□□ -0.49
SNRNP35-202ENST00000412157 ACTN2P35609 894 aa12□□□□□ -0.49
SNRNP35-202ENST00000412157 ATP5C1P36542 298 aaKnown RBP12□□□□□ -0.49
SNRNP35-202ENST00000412157 ADCY8P40145 1251 aa12□□□□□ -0.49
SNRNP35-202ENST00000412157 RPL21P46778 160 aaKnown RBP12□□□□□ -0.49
SNRNP35-202ENST00000412157 VPS41P49754 854 aa12□□□□□ -0.49
SNRNP35-202ENST00000412157 SMAD3P84022 425 aaKnown RBP12□□□□□ -0.49
SNRNP35-202ENST00000412157 CAV1Q03135 178 aa12□□□□□ -0.49
SNRNP35-202ENST00000412157 SEMA3BQ13214 749 aa12□□□□□ -0.49
SNRNP35-202ENST00000412157 DPYSQ14117 519 aa12□□□□□ -0.49
SNRNP35-202ENST00000412157 PAFAH1B3Q15102 231 aaKnown RBP12□□□□□ -0.49
SNRNP35-202ENST00000412157 HECTD3Q5T447 861 aa12□□□□□ -0.49
SNRNP35-202ENST00000412157 SNX30Q5VWJ9 437 aa12□□□□□ -0.49
SNRNP35-202ENST00000412157 MIB1Q86YT6 1006 aa12□□□□□ -0.49
SNRNP35-202ENST00000412157 ELMOD1Q8N336 334 aa12□□□□□ -0.49
SNRNP35-202ENST00000412157 ZNF276Q8N554 614 aa12□□□□□ -0.49
SNRNP35-202ENST00000412157 SPPL3Q8TCT6 385 aa12□□□□□ -0.49
SNRNP35-202ENST00000412157 MICAL1Q8TDZ2 1067 aa12□□□□□ -0.49
SNRNP35-202ENST00000412157 PSMG2Q969U7 264 aa12□□□□□ -0.49
SNRNP35-202ENST00000412157 TBC1D31Q96DN5 1066 aa12□□□□□ -0.49
SNRNP35-202ENST00000412157 SLC39A13Q96H72 371 aa12□□□□□ -0.49
SNRNP35-202ENST00000412157 FCRL2Q96LA5 508 aaPredicted RBP12□□□□□ -0.49
SNRNP35-202ENST00000412157 MYRFLQ96LU7 910 aa12□□□□□ -0.49
SNRNP35-202ENST00000412157 FMO2Q99518 471 aa12□□□□□ -0.49
SNRNP35-202ENST00000412157 SIK2Q9H0K1 926 aa12□□□□□ -0.49
SNRNP35-202ENST00000412157 CATSPERBQ9H7T0 1116 aa12□□□□□ -0.49
SNRNP35-202ENST00000412157 ANLNQ9NQW6 1124 aa12□□□□□ -0.49
SNRNP35-202ENST00000412157 PRDM6Q9NQX0 595 aa12□□□□□ -0.49
SNRNP35-202ENST00000412157 OR12D3Q9UGF7 316 aa12□□□□□ -0.49
SNRNP35-202ENST00000412157 DNMT3LQ9UJW3 386 aa12□□□□□ -0.49
SNRNP35-202ENST00000412157 HBS1LQ9Y450 684 aaKnown RBP12□□□□□ -0.49
SNRNP35-202ENST00000412157 IRAK3Q9Y616 596 aa12□□□□□ -0.49
SNRNP35-202ENST00000412157 RAD54BQ9Y620 910 aa12□□□□□ -0.49
SNRNP35-202ENST00000412157 NUP205Q92621 2012 aa11.99□□□□□ -0.49
SNRNP35-202ENST00000412157 BCLAF3A2AJT9 711 aaKnown RBP11.99□□□□□ -0.49
SNRNP35-202ENST00000412157 HACD1B0YJ81 288 aa11.99□□□□□ -0.49
SNRNP35-202ENST00000412157 PPP1R12AO14974 1030 aaPredicted RBP11.99□□□□□ -0.49
SNRNP35-202ENST00000412157 DCLK1O15075 740 aa11.99□□□□□ -0.49
SNRNP35-202ENST00000412157 FGF10O15520 208 aaPredicted RBP11.99□□□□□ -0.49
SNRNP35-202ENST00000412157 MFSD11O43934 449 aa11.99□□□□□ -0.49
SNRNP35-202ENST00000412157 LRIG2O94898 1065 aa11.99□□□□□ -0.49
SNRNP35-202ENST00000412157 C8AP07357 584 aa11.99□□□□□ -0.49
SNRNP35-202ENST00000412157 HMGA1P17096 107 aaKnown RBP11.99□□□□□ -0.49
SNRNP35-202ENST00000412157 ERCC2P18074 760 aa11.99□□□□□ -0.49
SNRNP35-202ENST00000412157 ITIH2P19823 946 aa11.99□□□□□ -0.49
SNRNP35-202ENST00000412157 EPHB2P29323 1055 aa11.99□□□□□ -0.49
SNRNP35-202ENST00000412157 STIP1P31948 543 aaKnown RBP11.99□□□□□ -0.49
SNRNP35-202ENST00000412157 TUBP50607 506 aa11.99□□□□□ -0.49
SNRNP35-202ENST00000412157 PLTPP55058 493 aa11.99□□□□□ -0.49
SNRNP35-202ENST00000412157 ERVFC1P60507 584 aa11.99□□□□□ -0.49
SNRNP35-202ENST00000412157 NRG1Q02297 640 aaPredicted RBP11.99□□□□□ -0.49
SNRNP35-202ENST00000412157 GBE1Q04446 702 aa11.99□□□□□ -0.49
SNRNP35-202ENST00000412157 RING1Q06587 406 aa11.99□□□□□ -0.49
SNRNP35-202ENST00000412157 TRADDQ15628 312 aa11.99□□□□□ -0.49
SNRNP35-202ENST00000412157 ACBD5Q5T8D3 534 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms