RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 ZMYM2Q9UBW7 1377 aa4.69□□□□□ -1.66
PMS1-203ENST00000409593 GXYLT2A0PJZ3 443 aa4.69□□□□□ -1.66
PMS1-203ENST00000409593 M0QYT0 321 aa4.69□□□□□ -1.66
PMS1-203ENST00000409593 RPP40O75818 363 aaKnown RBP4.69□□□□□ -1.66
PMS1-203ENST00000409593 RNASELQ05823 741 aaKnown RBP4.69□□□□□ -1.66
PMS1-203ENST00000409593 DMWDQ09019 674 aa4.69□□□□□ -1.66
PMS1-203ENST00000409593 BRD3Q15059 726 aa4.69□□□□□ -1.66
PMS1-203ENST00000409593 LRCH2Q5VUJ6 765 aa4.69□□□□□ -1.66
PMS1-203ENST00000409593 GLCCI1Q86VQ1 547 aa4.69□□□□□ -1.66
PMS1-203ENST00000409593 RHPN2Q8IUC4 686 aa4.69□□□□□ -1.66
PMS1-203ENST00000409593 LAS2Q8IYD9 372 aa4.69□□□□□ -1.66
PMS1-203ENST00000409593 ZNF527Q8NB42 609 aa4.69□□□□□ -1.66
PMS1-203ENST00000409593 STYXQ8WUJ0 223 aa4.69□□□□□ -1.66
PMS1-203ENST00000409593 WDR60Q8WVS4 1066 aa4.69□□□□□ -1.66
PMS1-203ENST00000409593 ABHD14AQ9BUJ0 271 aa4.69□□□□□ -1.66
PMS1-203ENST00000409593 FOXP1Q9H334 677 aaPredicted RBP4.69□□□□□ -1.66
PMS1-203ENST00000409593 TMEM45AQ9NWC5 275 aa4.69□□□□□ -1.66
PMS1-203ENST00000409593 IPO11Q9UI26 975 aaKnown RBP4.69□□□□□ -1.66
PMS1-203ENST00000409593 B3GNT3Q9Y2A9 372 aa4.69□□□□□ -1.66
PMS1-203ENST00000409593 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.68□□□□□ -1.66
PMS1-203ENST00000409593 FFAR2O15552 330 aa4.68□□□□□ -1.66
PMS1-203ENST00000409593 DNPH1O43598 174 aa4.68□□□□□ -1.66
PMS1-203ENST00000409593 TNFRSF6BO95407 300 aa4.68□□□□□ -1.66
PMS1-203ENST00000409593 ENO1P06733 434 aaKnown RBP4.68□□□□□ -1.66
PMS1-203ENST00000409593 SETSIPP0DME0 302 aa4.68□□□□□ -1.66
PMS1-203ENST00000409593 PEPDP12955 493 aa4.68□□□□□ -1.66
PMS1-203ENST00000409593 TFEBP19484 476 aa4.68□□□□□ -1.66
PMS1-203ENST00000409593 NR4A2P43354 598 aa4.68□□□□□ -1.66
PMS1-203ENST00000409593 ZNF84P51523 738 aa4.68□□□□□ -1.66
PMS1-203ENST00000409593 TRIM71Q2Q1W2 868 aaKnown RBP4.68□□□□□ -1.66
PMS1-203ENST00000409593 EARS2Q5JPH6 523 aaKnown RBP4.68□□□□□ -1.66
PMS1-203ENST00000409593 WDR93Q6P2C0 686 aa4.68□□□□□ -1.66
PMS1-203ENST00000409593 DEF8Q6ZN54 512 aa4.68□□□□□ -1.66
PMS1-203ENST00000409593 FAM57BQ71RH2 274 aa4.68□□□□□ -1.66
PMS1-203ENST00000409593 NRSN1Q8IZ57 195 aa4.68□□□□□ -1.66
PMS1-203ENST00000409593 P2RY11Q96G91 374 aa4.68□□□□□ -1.66
PMS1-203ENST00000409593 REXO5Q96IC2 774 aaKnown RBP4.68□□□□□ -1.66
PMS1-203ENST00000409593 PAAF1Q9BRP4 392 aa4.68□□□□□ -1.66
PMS1-203ENST00000409593 TMEM79Q9BSE2 394 aa4.68□□□□□ -1.66
PMS1-203ENST00000409593 MOV10Q9HCE1 1003 aaKnown RBP4.68□□□□□ -1.66
PMS1-203ENST00000409593 KCNK9Q9NPC2 374 aa4.68□□□□□ -1.66
PMS1-203ENST00000409593 HEY2Q9UBP5 337 aa4.68□□□□□ -1.66
PMS1-203ENST00000409593 RAB21Q9UL25 225 aa4.68□□□□□ -1.66
PMS1-203ENST00000409593 EMSYQ7Z589 1322 aa4.68□□□□□ -1.66
PMS1-203ENST00000409593 GOLGA6L3A6NEY3 463 aa4.67□□□□□ -1.66
PMS1-203ENST00000409593 KIF28PB7ZC32 967 aa4.67□□□□□ -1.66
PMS1-203ENST00000409593 F8W810 466 aa4.67□□□□□ -1.66
PMS1-203ENST00000409593 UGDHO60701 494 aa4.67□□□□□ -1.66
PMS1-203ENST00000409593 IL6STP40189 918 aaPredicted RBP4.67□□□□□ -1.66
PMS1-203ENST00000409593 SOX2P48431 317 aa4.67□□□□□ -1.66
PMS1-203ENST00000409593 CCT4P50991 539 aaKnown RBP4.67□□□□□ -1.66
PMS1-203ENST00000409593 SLC37A1P57057 533 aa4.67□□□□□ -1.66
PMS1-203ENST00000409593 AAK1Q2M2I8 961 aa4.67□□□□□ -1.66
PMS1-203ENST00000409593 BTBD16Q32M84 506 aa4.67□□□□□ -1.66
PMS1-203ENST00000409593 ZNF260Q3ZCT1 412 aa4.67□□□□□ -1.66
PMS1-203ENST00000409593 LIPMQ5VYY2 423 aa4.67□□□□□ -1.66
PMS1-203ENST00000409593 TRABD2AQ86V40 505 aa4.67□□□□□ -1.66
PMS1-203ENST00000409593 SRFBP1Q8NEF9 429 aaKnown RBP4.67□□□□□ -1.66
PMS1-203ENST00000409593 IGFBPL1Q8WX77 278 aa4.67□□□□□ -1.66
PMS1-203ENST00000409593 GATA5Q9BWX5 397 aaPredicted RBP4.67□□□□□ -1.66
PMS1-203ENST00000409593 CCDC134Q9H6E4 229 aa4.67□□□□□ -1.66
PMS1-203ENST00000409593 OBP2BQ9NPH6 170 aa4.67□□□□□ -1.66
PMS1-203ENST00000409593 SLC8A2Q9UPR5 921 aa4.67□□□□□ -1.66
PMS1-203ENST00000409593 A0A087WV62 115 aa4.67□□□□□ -1.66
PMS1-203ENST00000409593 CCDC194A0A1B0GVG4 234 aa4.67□□□□□ -1.66
PMS1-203ENST00000409593 LGALS16A8MUM7 142 aa4.67□□□□□ -1.66
PMS1-203ENST00000409593 NKX2-8O15522 239 aa4.67□□□□□ -1.66
PMS1-203ENST00000409593 KAT7O95251 611 aa4.67□□□□□ -1.66
PMS1-203ENST00000409593 ALDOAP04075 364 aaKnown RBP4.67□□□□□ -1.66
PMS1-203ENST00000409593 TMEM191BP0C7N4 346 aa4.67□□□□□ -1.66
PMS1-203ENST00000409593 TAS2R50P59544 299 aa4.67□□□□□ -1.66
PMS1-203ENST00000409593 TNFAIP2Q03169 654 aa4.67□□□□□ -1.66
PMS1-203ENST00000409593 MTX1Q13505 466 aa4.67□□□□□ -1.66
PMS1-203ENST00000409593 SPARCL1Q14515 664 aa4.67□□□□□ -1.66
PMS1-203ENST00000409593 PGBD2Q6P3X8 592 aa4.67□□□□□ -1.66
PMS1-203ENST00000409593 UBE2Q1Q7Z7E8 422 aa4.67□□□□□ -1.66
PMS1-203ENST00000409593 ZNF366Q8N895 744 aa4.67□□□□□ -1.66
PMS1-203ENST00000409593 ZNF548Q8NEK5 533 aaPredicted RBP4.67□□□□□ -1.66
PMS1-203ENST00000409593 FAM71BQ8TC56 605 aa4.67□□□□□ -1.66
PMS1-203ENST00000409593 ZBTB9Q96C00 473 aa4.67□□□□□ -1.66
PMS1-203ENST00000409593 TRPC5Q9UL62 973 aaPredicted RBP4.67□□□□□ -1.66
PMS1-203ENST00000409593 NFU1Q9UMS0 254 aa4.67□□□□□ -1.66
PMS1-203ENST00000409593 LOC105369274A0A096LPK9 316 aa4.66□□□□□ -1.66
PMS1-203ENST00000409593 LOC102723532A0A0G2JNH3 316 aa4.66□□□□□ -1.66
PMS1-203ENST00000409593 CNOT3O75175 753 aaKnown RBP4.66□□□□□ -1.66
PMS1-203ENST00000409593 SKAP2O75563 359 aaPredicted RBP4.66□□□□□ -1.66
PMS1-203ENST00000409593 CNTN5O94779 1100 aa4.66□□□□□ -1.66
PMS1-203ENST00000409593 GRK5P34947 590 aa4.66□□□□□ -1.66
PMS1-203ENST00000409593 HNRNPA0Q13151 305 aaKnown RBP4.66□□□□□ -1.66
PMS1-203ENST00000409593 LAMB3Q13751 1172 aa4.66□□□□□ -1.66
PMS1-203ENST00000409593 SPATA31A5Q5VU36 1347 aa4.66□□□□□ -1.66
PMS1-203ENST00000409593 C1orf228Q6PIY5 440 aa4.66□□□□□ -1.66
PMS1-203ENST00000409593 SLC39A5Q6ZMH5 540 aa4.66□□□□□ -1.66
PMS1-203ENST00000409593 TOGARAM2Q6ZUX3 1019 aa4.66□□□□□ -1.66
PMS1-203ENST00000409593 SPATA31A7Q8IWB4 1347 aa4.66□□□□□ -1.66
PMS1-203ENST00000409593 OR4N4Q8N0Y3 316 aa4.66□□□□□ -1.66
PMS1-203ENST00000409593 VPS37AQ8NEZ2 397 aa4.66□□□□□ -1.66
PMS1-203ENST00000409593 WIPF2Q8TF74 440 aaPredicted RBP4.66□□□□□ -1.66
PMS1-203ENST00000409593 ZFPM2Q8WW38 1151 aa4.66□□□□□ -1.66
PMS1-203ENST00000409593 MPHOSPH6Q99547 160 aaKnown RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms