RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 TSPAN3O60637 253 aa20.58■□□□□ 0.89
PDLIM2-207ENST00000409417 MFAP3LO75121 409 aa20.58■□□□□ 0.89
PDLIM2-207ENST00000409417 GJB6O95452 261 aa20.58■□□□□ 0.89
PDLIM2-207ENST00000409417 COL9A1P20849 921 aa20.58■□□□□ 0.89
PDLIM2-207ENST00000409417 RFC1P35251 1148 aaPredicted RBP20.58■□□□□ 0.89
PDLIM2-207ENST00000409417 DEUP1Q05D60 604 aa20.58■□□□□ 0.89
PDLIM2-207ENST00000409417 KDSRQ06136 332 aa20.58■□□□□ 0.89
PDLIM2-207ENST00000409417 TBX2Q13207 712 aaPredicted RBP20.58■□□□□ 0.89
PDLIM2-207ENST00000409417 GAS6Q14393 721 aa20.58■□□□□ 0.89
PDLIM2-207ENST00000409417 GRAMD4Q6IC98 578 aa20.58■□□□□ 0.89
PDLIM2-207ENST00000409417 WDR59Q6PJI9 974 aa20.58■□□□□ 0.89
PDLIM2-207ENST00000409417 NUDT18Q6ZVK8 323 aa20.58■□□□□ 0.89
PDLIM2-207ENST00000409417 TMC6Q7Z403 805 aa20.58■□□□□ 0.89
PDLIM2-207ENST00000409417 SPEM1Q8N4L4 309 aa20.58■□□□□ 0.89
PDLIM2-207ENST00000409417 JOSD2Q8TAC2 188 aa20.58■□□□□ 0.89
PDLIM2-207ENST00000409417 RXFP2Q8WXD0 754 aa20.58■□□□□ 0.89
PDLIM2-207ENST00000409417 ISCUQ9H1K1 167 aa20.58■□□□□ 0.89
PDLIM2-207ENST00000409417 ABHD10Q9NUJ1 306 aa20.58■□□□□ 0.89
PDLIM2-207ENST00000409417 ZNHIT6Q9NWK9 470 aaKnown RBP20.58■□□□□ 0.89
PDLIM2-207ENST00000409417 TBC1D3BA6NDS4 549 aa20.57■□□□□ 0.88
PDLIM2-207ENST00000409417 TRIM24O15164 1050 aa20.57■□□□□ 0.88
PDLIM2-207ENST00000409417 RNF40O75150 1001 aa20.57■□□□□ 0.88
PDLIM2-207ENST00000409417 ENDOD1O94919 500 aa20.57■□□□□ 0.88
PDLIM2-207ENST00000409417 CISD3P0C7P0 127 aa20.57■□□□□ 0.88
PDLIM2-207ENST00000409417 HOXD9P28356 352 aaPredicted RBP20.57■□□□□ 0.88
PDLIM2-207ENST00000409417 SDC4P31431 198 aa20.57■□□□□ 0.88
PDLIM2-207ENST00000409417 PTPN9P43378 593 aa20.57■□□□□ 0.88
PDLIM2-207ENST00000409417 TNFRSF4P43489 277 aa20.57■□□□□ 0.88
PDLIM2-207ENST00000409417 DGKGP49619 791 aa20.57■□□□□ 0.88
PDLIM2-207ENST00000409417 CCDC14Q49A88 953 aa20.57■□□□□ 0.88
PDLIM2-207ENST00000409417 BRMS1LQ5PSV4 323 aa20.57■□□□□ 0.88
PDLIM2-207ENST00000409417 CNGA4Q8IV77 575 aa20.57■□□□□ 0.88
PDLIM2-207ENST00000409417 SLC2A11Q9BYW1 496 aa20.57■□□□□ 0.88
PDLIM2-207ENST00000409417 WDCPQ9H6R7 721 aa20.57■□□□□ 0.88
PDLIM2-207ENST00000409417 PARVAQ9NVD7 372 aa20.57■□□□□ 0.88
PDLIM2-207ENST00000409417 SLC27A6Q9Y2P4 619 aa20.57■□□□□ 0.88
PDLIM2-207ENST00000409417 A0A087X0T9 212 aa20.56■□□□□ 0.88
PDLIM2-207ENST00000409417 ANKRD62A6NC57 917 aa20.56■□□□□ 0.88
PDLIM2-207ENST00000409417 FAM228BP0C875 321 aa20.56■□□□□ 0.88
PDLIM2-207ENST00000409417 RDXP35241 583 aaKnown RBP20.56■□□□□ 0.88
PDLIM2-207ENST00000409417 ADKP55263 362 aaKnown RBP20.56■□□□□ 0.88
PDLIM2-207ENST00000409417 ATP11AP98196 1134 aa20.56■□□□□ 0.88
PDLIM2-207ENST00000409417 MAMLD1Q13495 774 aa20.56■□□□□ 0.88
PDLIM2-207ENST00000409417 MS4A13Q5J8X5 152 aa20.56■□□□□ 0.88
PDLIM2-207ENST00000409417 PPP1R15BQ5SWA1 713 aa20.56■□□□□ 0.88
PDLIM2-207ENST00000409417 RNF43Q68DV7 783 aa20.56■□□□□ 0.88
PDLIM2-207ENST00000409417 PLEKHA7Q6IQ23 1121 aa20.56■□□□□ 0.88
PDLIM2-207ENST00000409417 SFTPA1Q8IWL2 248 aa20.56■□□□□ 0.88
PDLIM2-207ENST00000409417 TERB1Q8NA31 727 aa20.56■□□□□ 0.88
PDLIM2-207ENST00000409417 HJURPQ8NCD3 748 aaPredicted RBP20.56■□□□□ 0.88
PDLIM2-207ENST00000409417 CENPIQ92674 756 aaPredicted RBP20.56■□□□□ 0.88
PDLIM2-207ENST00000409417 TRIM11Q96F44 468 aa20.56■□□□□ 0.88
PDLIM2-207ENST00000409417 ARHGEF38Q9NXL2 777 aa20.56■□□□□ 0.88
PDLIM2-207ENST00000409417 CHURC1-FNTBB4DL54 471 aa20.56■□□□□ 0.88
PDLIM2-207ENST00000409417 AKR1B15C9JRZ8 316 aaPredicted RBP20.56■□□□□ 0.88
PDLIM2-207ENST00000409417 LAMTOR5O43504 91 aa20.56■□□□□ 0.88
PDLIM2-207ENST00000409417 ATG13O75143 517 aa20.56■□□□□ 0.88
PDLIM2-207ENST00000409417 MYBL1P10243 752 aa20.56■□□□□ 0.88
PDLIM2-207ENST00000409417 EIF4A3P38919 411 aaKnown RBP20.56■□□□□ 0.88
PDLIM2-207ENST00000409417 SGSHP51688 502 aa20.56■□□□□ 0.88
PDLIM2-207ENST00000409417 RPL7AP62424 266 aaKnown RBP20.56■□□□□ 0.88
PDLIM2-207ENST00000409417 ANGPT1Q15389 498 aa20.56■□□□□ 0.88
PDLIM2-207ENST00000409417 DCUN1D2Q6PH85 259 aa20.56■□□□□ 0.88
PDLIM2-207ENST00000409417 CHSY1Q86X52 802 aa20.56■□□□□ 0.88
PDLIM2-207ENST00000409417 DNAAF5Q86Y56 855 aa20.56■□□□□ 0.88
PDLIM2-207ENST00000409417 PRSS33Q8NF86 280 aa20.56■□□□□ 0.88
PDLIM2-207ENST00000409417 PRICKLE1Q96MT3 831 aaPredicted RBP20.56■□□□□ 0.88
PDLIM2-207ENST00000409417 MCEEQ96PE7 176 aa20.56■□□□□ 0.88
PDLIM2-207ENST00000409417 PRMT1Q99873 361 aaKnown RBP20.56■□□□□ 0.88
PDLIM2-207ENST00000409417 CLEC4EQ9ULY5 219 aa20.56■□□□□ 0.88
PDLIM2-207ENST00000409417 ARIH1Q9Y4X5 557 aaPredicted RBP20.56■□□□□ 0.88
PDLIM2-207ENST00000409417 TYW5A2RUC4 315 aaKnown RBP20.55■□□□□ 0.88
PDLIM2-207ENST00000409417 TBL1XO60907 577 aa20.55■□□□□ 0.88
PDLIM2-207ENST00000409417 PAGE1O75459 146 aa20.55■□□□□ 0.88
PDLIM2-207ENST00000409417 ADCY5O95622 1261 aa20.55■□□□□ 0.88
PDLIM2-207ENST00000409417 TACR2P21452 398 aa20.55■□□□□ 0.88
PDLIM2-207ENST00000409417 GPD1P21695 349 aa20.55■□□□□ 0.88
PDLIM2-207ENST00000409417 CCR3P51677 355 aa20.55■□□□□ 0.88
PDLIM2-207ENST00000409417 ZNF143P52747 638 aaPredicted RBP20.55■□□□□ 0.88
PDLIM2-207ENST00000409417 RPS24P62847 133 aaKnown RBP20.55■□□□□ 0.88
PDLIM2-207ENST00000409417 TCF15Q12870 199 aa20.55■□□□□ 0.88
PDLIM2-207ENST00000409417 C15orf59Q2T9L4 293 aaPredicted RBP20.55■□□□□ 0.88
PDLIM2-207ENST00000409417 C10orf76Q5T2E6 689 aa20.55■□□□□ 0.88
PDLIM2-207ENST00000409417 RAP1GAP2Q684P5 730 aa20.55■□□□□ 0.88
PDLIM2-207ENST00000409417 ALKBH5Q6P6C2 394 aaKnown RBP20.55■□□□□ 0.88
PDLIM2-207ENST00000409417 MAML2Q8IZL2 1156 aaPredicted RBP20.55■□□□□ 0.88
PDLIM2-207ENST00000409417 LGI2Q8N0V4 545 aa20.55■□□□□ 0.88
PDLIM2-207ENST00000409417 USP33Q8TEY7 942 aa20.55■□□□□ 0.88
PDLIM2-207ENST00000409417 TKTL2Q9H0I9 626 aa20.55■□□□□ 0.88
PDLIM2-207ENST00000409417 SSU72P8A0A1W2PR75 194 aa20.54■□□□□ 0.88
PDLIM2-207ENST00000409417 F5H5T6 163 aa20.54■□□□□ 0.88
PDLIM2-207ENST00000409417 ATMINO43313 823 aaPredicted RBP20.54■□□□□ 0.88
PDLIM2-207ENST00000409417 CXCL12P48061 93 aa20.54■□□□□ 0.88
PDLIM2-207ENST00000409417 ATXN1P54253 815 aaKnown RBP20.54■□□□□ 0.88
PDLIM2-207ENST00000409417 SEC13P55735 322 aa20.54■□□□□ 0.88
PDLIM2-207ENST00000409417 MRPS21P82921 87 aaKnown RBP20.54■□□□□ 0.88
PDLIM2-207ENST00000409417 MAPK8IP2Q13387 824 aaPredicted RBP20.54■□□□□ 0.88
PDLIM2-207ENST00000409417 CDO1Q16878 200 aa20.54■□□□□ 0.88
PDLIM2-207ENST00000409417 ACBD5Q5T8D3 534 aaPredicted RBP20.54■□□□□ 0.88
PDLIM2-207ENST00000409417 SH3PXD2AQ5TCZ1 1133 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms