RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 SYTL1Q8IYJ3 562 aa25.66■■□□□ 1.7
SPIRE1-202ENST00000409402 B3GALNT2Q8NCR0 500 aa25.66■■□□□ 1.7
SPIRE1-202ENST00000409402 KCNMB3Q9NPA1 279 aa25.66■■□□□ 1.7
SPIRE1-202ENST00000409402 ERI2A8K979 691 aaKnown RBP25.66■■□□□ 1.7
SPIRE1-202ENST00000409402 CPSF4O95639 269 aaKnown RBP25.66■■□□□ 1.7
SPIRE1-202ENST00000409402 PAPD7Q5XG87 772 aaKnown RBP25.66■■□□□ 1.7
SPIRE1-202ENST00000409402 MIEF1Q9NQG6 463 aa25.66■■□□□ 1.7
SPIRE1-202ENST00000409402 CCNT2O60583 730 aaKnown RBP25.66■■□□□ 1.7
SPIRE1-202ENST00000409402 CPA3P15088 417 aa25.66■■□□□ 1.7
SPIRE1-202ENST00000409402 TRIP10Q15642 601 aa25.66■■□□□ 1.7
SPIRE1-202ENST00000409402 HECTD3Q5T447 861 aa25.66■■□□□ 1.7
SPIRE1-202ENST00000409402 FBXL19Q6PCT2 694 aa25.66■■□□□ 1.7
SPIRE1-202ENST00000409402 LRRC4BQ9NT99 713 aa25.66■■□□□ 1.7
SPIRE1-202ENST00000409402 KRT8P05787 483 aa25.66■■□□□ 1.7
SPIRE1-202ENST00000409402 PGAM1P18669 254 aa25.66■■□□□ 1.7
SPIRE1-202ENST00000409402 WLSQ5T9L3 541 aa25.66■■□□□ 1.7
SPIRE1-202ENST00000409402 MOB2Q70IA6 237 aa25.66■■□□□ 1.7
SPIRE1-202ENST00000409402 CENPLQ8N0S6 344 aaPredicted RBP25.66■■□□□ 1.7
SPIRE1-202ENST00000409402 HELQQ8TDG4 1101 aa25.66■■□□□ 1.7
SPIRE1-202ENST00000409402 AVENQ9NQS1 362 aaPredicted RBP25.66■■□□□ 1.7
SPIRE1-202ENST00000409402 CDH9Q9ULB4 789 aa25.66■■□□□ 1.7
SPIRE1-202ENST00000409402 RAD51BO15315 384 aa25.65■■□□□ 1.7
SPIRE1-202ENST00000409402 KRT6AP02538 564 aa25.65■■□□□ 1.7
SPIRE1-202ENST00000409402 KRT6BP04259 564 aa25.65■■□□□ 1.7
SPIRE1-202ENST00000409402 PSMA4P25789 261 aaKnown RBP25.65■■□□□ 1.7
SPIRE1-202ENST00000409402 SERPINA4P29622 427 aa25.65■■□□□ 1.7
SPIRE1-202ENST00000409402 KRT6CP48668 564 aa25.65■■□□□ 1.7
SPIRE1-202ENST00000409402 VAT1Q99536 393 aa25.65■■□□□ 1.7
SPIRE1-202ENST00000409402 TDRKHQ9Y2W6 561 aaKnown RBP25.65■■□□□ 1.7
SPIRE1-202ENST00000409402 COL3A1P02461 1466 aaPredicted RBP25.65■■□□□ 1.7
SPIRE1-202ENST00000409402 GUCA1AP43080 201 aaPredicted RBP25.65■■□□□ 1.7
SPIRE1-202ENST00000409402 BOP1Q14137 746 aaKnown RBP25.65■■□□□ 1.7
SPIRE1-202ENST00000409402 RBM43Q6ZSC3 357 aaKnown RBP25.65■■□□□ 1.7
SPIRE1-202ENST00000409402 C18orf25Q96B23 403 aaPredicted RBP25.65■■□□□ 1.7
SPIRE1-202ENST00000409402 AHCYL2Q96HN2 611 aaKnown RBP25.65■■□□□ 1.7
SPIRE1-202ENST00000409402 ACOX2Q99424 681 aa25.65■■□□□ 1.7
SPIRE1-202ENST00000409402 DNMT3LQ9UJW3 386 aa25.65■■□□□ 1.7
SPIRE1-202ENST00000409402 MROH2AA6NES4 1674 aa25.65■■□□□ 1.7
SPIRE1-202ENST00000409402 SERPINB5P36952 375 aa25.65■■□□□ 1.7
SPIRE1-202ENST00000409402 MMP13P45452 471 aa25.65■■□□□ 1.7
SPIRE1-202ENST00000409402 SLC16A1P53985 500 aa25.65■■□□□ 1.7
SPIRE1-202ENST00000409402 GRTP1Q5TC63 336 aa25.65■■□□□ 1.7
SPIRE1-202ENST00000409402 PLD3Q8IV08 490 aa25.65■■□□□ 1.7
SPIRE1-202ENST00000409402 GALNT4Q8N4A0 578 aa25.65■■□□□ 1.7
SPIRE1-202ENST00000409402 MDM1Q8TC05 714 aa25.65■■□□□ 1.7
SPIRE1-202ENST00000409402 PRDM16Q9HAZ2 1276 aa25.65■■□□□ 1.7
SPIRE1-202ENST00000409402 SHOC2Q9UQ13 582 aa25.65■■□□□ 1.7
SPIRE1-202ENST00000409402 IFNA14P01570 189 aa25.65■■□□□ 1.7
SPIRE1-202ENST00000409402 CPA2P48052 419 aa25.65■■□□□ 1.7
SPIRE1-202ENST00000409402 INPP5DQ92835 1189 aa25.65■■□□□ 1.7
SPIRE1-202ENST00000409402 KIF1AQ12756 1690 aa25.64■■□□□ 1.7
SPIRE1-202ENST00000409402 TMEM88BA6NKF7 163 aa25.64■■□□□ 1.7
SPIRE1-202ENST00000409402 VGLL3A8MV65 326 aa25.64■■□□□ 1.7
SPIRE1-202ENST00000409402 TNNI3P19429 210 aa25.64■■□□□ 1.7
SPIRE1-202ENST00000409402 GRK2P25098 689 aa25.64■■□□□ 1.7
SPIRE1-202ENST00000409402 RRM2P31350 389 aa25.64■■□□□ 1.7
SPIRE1-202ENST00000409402 CRYBB1P53674 252 aaPredicted RBP25.64■■□□□ 1.7
SPIRE1-202ENST00000409402 SPANXN3Q5MJ09 141 aa25.64■■□□□ 1.7
SPIRE1-202ENST00000409402 KHDRBS2Q5VWX1 349 aaKnown RBP25.64■■□□□ 1.7
SPIRE1-202ENST00000409402 USP45Q70EL2 814 aa25.64■■□□□ 1.7
SPIRE1-202ENST00000409402 KCNMB4Q86W47 210 aa25.64■■□□□ 1.7
SPIRE1-202ENST00000409402 MAN1A2O60476 641 aa25.64■■□□□ 1.7
SPIRE1-202ENST00000409402 SETMARQ53H47 684 aaPredicted RBP25.64■■□□□ 1.7
SPIRE1-202ENST00000409402 MAGEB18Q96M61 343 aa25.64■■□□□ 1.7
SPIRE1-202ENST00000409402 EFCAB1Q9HAE3 211 aa25.64■■□□□ 1.7
SPIRE1-202ENST00000409402 USP41Q3LFD5 358 aa25.64■■□□□ 1.69
SPIRE1-202ENST00000409402 PPP1R10Q96QC0 940 aaKnown RBP25.64■■□□□ 1.69
SPIRE1-202ENST00000409402 PANX3Q96QZ0 392 aa25.64■■□□□ 1.69
SPIRE1-202ENST00000409402 MPP6Q9NZW5 540 aa25.64■■□□□ 1.69
SPIRE1-202ENST00000409402 RASSF10A6NK89 507 aa25.64■■□□□ 1.69
SPIRE1-202ENST00000409402 FGF10O15520 208 aaPredicted RBP25.64■■□□□ 1.69
SPIRE1-202ENST00000409402 ADH1AP07327 375 aa25.64■■□□□ 1.69
SPIRE1-202ENST00000409402 NOS2P35228 1153 aa25.64■■□□□ 1.69
SPIRE1-202ENST00000409402 CYP4Z1Q86W10 505 aa25.64■■□□□ 1.69
SPIRE1-202ENST00000409402 CACUL1Q86Y37 369 aa25.64■■□□□ 1.69
SPIRE1-202ENST00000409402 POLR1EQ9GZS1 481 aaKnown RBP25.64■■□□□ 1.69
SPIRE1-202ENST00000409402 RNF103O00237 685 aa25.63■■□□□ 1.69
SPIRE1-202ENST00000409402 APOA1P02647 267 aa25.63■■□□□ 1.69
SPIRE1-202ENST00000409402 ATP6AP1LQ52LC2 224 aa25.63■■□□□ 1.69
SPIRE1-202ENST00000409402 NYAP1Q6ZVC0 841 aa25.63■■□□□ 1.69
SPIRE1-202ENST00000409402 C2orf49Q9BVC5 232 aaPredicted RBP25.63■■□□□ 1.69
SPIRE1-202ENST00000409402 RGS18Q9NS28 235 aa25.63■■□□□ 1.69
SPIRE1-202ENST00000409402 ZNF839A8K0R7 811 aa25.63■■□□□ 1.69
SPIRE1-202ENST00000409402 RASSF9O75901 435 aa25.63■■□□□ 1.69
SPIRE1-202ENST00000409402 NFYCQ13952 458 aa25.63■■□□□ 1.69
SPIRE1-202ENST00000409402 DOK6Q6PKX4 331 aa25.63■■□□□ 1.69
SPIRE1-202ENST00000409402 ADCK1Q86TW2 530 aa25.63■■□□□ 1.69
SPIRE1-202ENST00000409402 MCOLN3Q8TDD5 553 aa25.63■■□□□ 1.69
SPIRE1-202ENST00000409402 TAS2R13Q9NYV9 303 aa25.63■■□□□ 1.69
SPIRE1-202ENST00000409402 MRPS23Q9Y3D9 190 aaKnown RBP25.63■■□□□ 1.69
SPIRE1-202ENST00000409402 PLOD1Q02809 727 aaPredicted RBP25.63■■□□□ 1.69
SPIRE1-202ENST00000409402 WNT8BQ93098 351 aa25.63■■□□□ 1.69
SPIRE1-202ENST00000409402 ZDHHC6Q9H6R6 413 aa25.63■■□□□ 1.69
SPIRE1-202ENST00000409402 TMCC3Q9ULS5 477 aa25.63■■□□□ 1.69
SPIRE1-202ENST00000409402 PCDHAC2Q9Y5I4 1007 aa25.63■■□□□ 1.69
SPIRE1-202ENST00000409402 BMP10O95393 424 aa25.63■■□□□ 1.69
SPIRE1-202ENST00000409402 CYP2C18P33260 490 aa25.63■■□□□ 1.69
SPIRE1-202ENST00000409402 CSTF3Q12996 717 aaKnown RBP25.63■■□□□ 1.69
SPIRE1-202ENST00000409402 DEPDC1Q5TB30 811 aa25.63■■□□□ 1.69
SPIRE1-202ENST00000409402 CYP3A7-CYP3A51PA0A087WV96 503 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms