RNA–Protein interactions for RNA: ENST00000409050.1

SCN1A-203, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 5,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-203ENST00000409050 MZF1P28698 734 aaPredicted RBP6.24□□□□□ -1.41
SCN1A-203ENST00000409050 RPL5P46777 297 aaKnown RBP6.24□□□□□ -1.41
SCN1A-203ENST00000409050 OTUD4Q01804 1114 aaKnown RBP6.24□□□□□ -1.41
SCN1A-203ENST00000409050 KCNMA1Q12791 1236 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 TWF1Q12792 350 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 CDH18Q13634 790 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 TSC22D1Q15714 1073 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 MAPK11Q15759 364 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 HLFQ16534 295 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 ERMARDQ5T6L9 678 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 PLEKHA7Q6IQ23 1121 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 ZNF605Q86T29 641 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 GPRC5AQ8NFJ5 357 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 SLC30A5Q8TAD4 765 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 MCOLN3Q8TDD5 553 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 CENPIQ92674 756 aaPredicted RBP6.24□□□□□ -1.41
SCN1A-203ENST00000409050 LENG9Q96B70 501 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 TMEM176AQ96HP8 235 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 OSBPL11Q9BXB4 747 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 DHX33Q9H6R0 707 aaKnown RBP6.24□□□□□ -1.41
SCN1A-203ENST00000409050 KCNQ5Q9NR82 932 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 VANGL2Q9ULK5 521 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 USP18Q9UMW8 372 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 AP4E1Q9UPM8 1137 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 INO80Q9ULG1 1556 aaPredicted RBP6.24□□□□□ -1.41
SCN1A-203ENST00000409050 A0A087WZ62 844 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 BCLAF3A2AJT9 711 aaKnown RBP6.24□□□□□ -1.41
SCN1A-203ENST00000409050 SMIM22K7EJ46 135 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 APOC4-APOC2K7ER74 178 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 NBNO60934 754 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 APOC2P02655 101 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 NUDT17P0C025 328 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 GRK4P32298 578 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 SLC1A6P48664 564 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 CLCN5P51795 746 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 CCNG1P51959 295 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 POLR2LP62875 67 aaKnown RBP6.24□□□□□ -1.41
SCN1A-203ENST00000409050 GRB10Q13322 594 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 SWT1Q5T5J6 900 aaKnown RBP6.24□□□□□ -1.41
SCN1A-203ENST00000409050 ZNF280DQ6N043 979 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 STRA8Q7Z7C7 330 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 TRIM48Q8IWZ4 208 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 SFRP1Q8N474 314 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 MYLPFQ96A32 169 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 HAVCR1Q96D42 359 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 PPP3R2Q96LZ3 170 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 THAP2Q9H0W7 228 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 RNPEPL1Q9HAU8 725 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 SAE1Q9UBE0 346 aaPredicted RBP6.24□□□□□ -1.41
SCN1A-203ENST00000409050 DAPK2Q9UIK4 370 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 ANAPC2Q9UJX6 822 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 BARX2Q9UMQ3 279 aaPredicted RBP6.24□□□□□ -1.41
SCN1A-203ENST00000409050 C17orf102A2RUQ5 167 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 M0QYT0 321 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 MRASO14807 208 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 ERCC2P18074 760 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 CASP1P29466 404 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 ADSSP30520 456 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 PTPN11Q06124 597 aaPredicted RBP6.24□□□□□ -1.41
SCN1A-203ENST00000409050 PDIA6Q15084 440 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 CYP2A13Q16696 494 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 ZDHHC20Q5W0Z9 365 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 TMC5Q6UXY8 1006 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 CCDC81Q6ZN84 652 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 TMC3Q7Z5M5 1100 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 PROSER1Q86XN7 944 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 KSR1Q8IVT5 923 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 PCSK9Q8NBP7 692 aaKnown RBP6.24□□□□□ -1.41
SCN1A-203ENST00000409050 RP9Q8TA86 221 aaKnown RBP6.24□□□□□ -1.41
SCN1A-203ENST00000409050 CELF1Q92879 486 aaKnown RBP6.24□□□□□ -1.41
SCN1A-203ENST00000409050 SKA1Q96BD8 255 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 UROC1Q96N76 676 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 MRPL9Q9BYD2 267 aaKnown RBP6.24□□□□□ -1.41
SCN1A-203ENST00000409050 KCNH7Q9NS40 1196 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 CDH9Q9ULB4 789 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 EFR3BQ9Y2G0 817 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 ARIH1Q9Y4X5 557 aaPredicted RBP6.24□□□□□ -1.41
SCN1A-203ENST00000409050 SAGE2PA6NJ88 616 aa6.23□□□□□ -1.41
SCN1A-203ENST00000409050 PRRG1O14668 218 aa6.23□□□□□ -1.41
SCN1A-203ENST00000409050 FOXN1O15353 648 aa6.23□□□□□ -1.41
SCN1A-203ENST00000409050 LRG1P02750 347 aa6.23□□□□□ -1.41
SCN1A-203ENST00000409050 DARSP14868 501 aaKnown RBP6.23□□□□□ -1.41
SCN1A-203ENST00000409050 ETS1P14921 441 aa6.23□□□□□ -1.41
SCN1A-203ENST00000409050 CCR1P32246 355 aa6.23□□□□□ -1.41
SCN1A-203ENST00000409050 PSEN1P49768 467 aa6.23□□□□□ -1.41
SCN1A-203ENST00000409050 SEC24CP53992 1094 aa6.23□□□□□ -1.41
SCN1A-203ENST00000409050 TUBA4AP68366 448 aa6.23□□□□□ -1.41
SCN1A-203ENST00000409050 TROAPQ12815 778 aa6.23□□□□□ -1.41
SCN1A-203ENST00000409050 STX4Q12846 297 aa6.23□□□□□ -1.41
SCN1A-203ENST00000409050 RIPK1Q13546 671 aa6.23□□□□□ -1.41
SCN1A-203ENST00000409050 PTGES3Q15185 160 aaKnown RBP6.23□□□□□ -1.41
SCN1A-203ENST00000409050 ALG11Q2TAA5 492 aa6.23□□□□□ -1.41
SCN1A-203ENST00000409050 CCDC157Q569K6 752 aa6.23□□□□□ -1.41
SCN1A-203ENST00000409050 EFCAB12Q6NXP0 572 aa6.23□□□□□ -1.41
SCN1A-203ENST00000409050 ZNF720Q7Z2F6 126 aa6.23□□□□□ -1.41
SCN1A-203ENST00000409050 GJD3Q8N144 294 aa6.23□□□□□ -1.41
SCN1A-203ENST00000409050 MIEF2Q96C03 454 aa6.23□□□□□ -1.41
SCN1A-203ENST00000409050 ADI1Q9BV57 179 aa6.23□□□□□ -1.41
SCN1A-203ENST00000409050 IL22Q9GZX6 179 aa6.23□□□□□ -1.41
SCN1A-203ENST00000409050 FBXO28Q9NVF7 368 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms