RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 MROH8Q9H579 483 aa11.06□□□□□ -0.64
CLIP4-204ENST00000404424 XPNPEP3Q9NQH7 507 aa11.06□□□□□ -0.64
CLIP4-204ENST00000404424 DNAJC28Q9NX36 388 aa11.06□□□□□ -0.64
CLIP4-204ENST00000404424 DNAJC16Q9Y2G8 782 aa11.06□□□□□ -0.64
CLIP4-204ENST00000404424 ASB3Q9Y575 518 aa11.06□□□□□ -0.64
CLIP4-204ENST00000404424 USP3Q9Y6I4 520 aa11.06□□□□□ -0.64
CLIP4-204ENST00000404424 CITO14578 2027 aa11.05□□□□□ -0.64
CLIP4-204ENST00000404424 TFE3P19532 575 aaPredicted RBP11.05□□□□□ -0.64
CLIP4-204ENST00000404424 CPOXP36551 454 aa11.05□□□□□ -0.64
CLIP4-204ENST00000404424 BAG6P46379 1132 aa11.05□□□□□ -0.64
CLIP4-204ENST00000404424 ARHGAP1Q07960 439 aa11.05□□□□□ -0.64
CLIP4-204ENST00000404424 PDE1CQ14123 709 aaPredicted RBP11.05□□□□□ -0.64
CLIP4-204ENST00000404424 HIC1Q14526 733 aa11.05□□□□□ -0.64
CLIP4-204ENST00000404424 Q3C1V9 767 aa11.05□□□□□ -0.64
CLIP4-204ENST00000404424 OR52E8Q6IFG1 317 aa11.05□□□□□ -0.64
CLIP4-204ENST00000404424 ZNF410Q86VK4 478 aa11.05□□□□□ -0.64
CLIP4-204ENST00000404424 HSFY1Q96LI6 401 aa11.05□□□□□ -0.64
CLIP4-204ENST00000404424 DNAI2Q9GZS0 605 aa11.05□□□□□ -0.64
CLIP4-204ENST00000404424 TXNRD2Q9NNW7 524 aa11.05□□□□□ -0.64
CLIP4-204ENST00000404424 PDGFCQ9NRA1 345 aa11.05□□□□□ -0.64
CLIP4-204ENST00000404424 NDE1Q9NXR1 346 aa11.05□□□□□ -0.64
CLIP4-204ENST00000404424 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.05□□□□□ -0.64
CLIP4-204ENST00000404424 RBPJLQ9UBG7 517 aa11.05□□□□□ -0.64
CLIP4-204ENST00000404424 EMCNQ9ULC0 261 aa11.05□□□□□ -0.64
CLIP4-204ENST00000404424 WASF2Q9Y6W5 498 aa11.05□□□□□ -0.64
CLIP4-204ENST00000404424 PLXNA1Q9UIW2 1896 aa11.05□□□□□ -0.64
CLIP4-204ENST00000404424 SPDYE5A6NIY4 337 aa11.04□□□□□ -0.64
CLIP4-204ENST00000404424 TPP1O14773 563 aa11.04□□□□□ -0.64
CLIP4-204ENST00000404424 ITGA2BP08514 1039 aa11.04□□□□□ -0.64
CLIP4-204ENST00000404424 VAV1P15498 845 aa11.04□□□□□ -0.64
CLIP4-204ENST00000404424 ALOX15P16050 662 aaPredicted RBP11.04□□□□□ -0.64
CLIP4-204ENST00000404424 CRABP2P29373 138 aa11.04□□□□□ -0.64
CLIP4-204ENST00000404424 PEX19P40855 299 aa11.04□□□□□ -0.64
CLIP4-204ENST00000404424 GARSP41250 739 aaKnown RBP11.04□□□□□ -0.64
CLIP4-204ENST00000404424 GLUD2P49448 558 aa11.04□□□□□ -0.64
CLIP4-204ENST00000404424 TUBP50607 506 aa11.04□□□□□ -0.64
CLIP4-204ENST00000404424 RPL10AP62906 217 aaKnown RBP11.04□□□□□ -0.64
CLIP4-204ENST00000404424 DSG1Q02413 1049 aa11.04□□□□□ -0.64
CLIP4-204ENST00000404424 UBAP2LQ14157 1087 aaKnown RBP11.04□□□□□ -0.64
CLIP4-204ENST00000404424 RABGAP1LQ5R372 815 aa11.04□□□□□ -0.64
CLIP4-204ENST00000404424 MTHFD1LQ6UB35 978 aa11.04□□□□□ -0.64
CLIP4-204ENST00000404424 BEST2Q8NFU1 509 aa11.04□□□□□ -0.64
CLIP4-204ENST00000404424 OR6B3Q8NGW1 331 aa11.04□□□□□ -0.64
CLIP4-204ENST00000404424 ZNF483Q8TF39 744 aaPredicted RBP11.04□□□□□ -0.64
CLIP4-204ENST00000404424 ARNTL2Q8WYA1 636 aa11.04□□□□□ -0.64
CLIP4-204ENST00000404424 CLMNQ96JQ2 1002 aa11.04□□□□□ -0.64
CLIP4-204ENST00000404424 TSC22D3Q99576 134 aa11.04□□□□□ -0.64
CLIP4-204ENST00000404424 APOL6Q9BWW8 343 aa11.04□□□□□ -0.64
CLIP4-204ENST00000404424 PDP2Q9P2J9 529 aa11.04□□□□□ -0.64
CLIP4-204ENST00000404424 SF3B1O75533 1304 aaKnown RBP eCLIP11.04□□□□□ -0.64
CLIP4-204ENST00000404424 A0A088AWK7 358 aa11.04□□□□□ -0.64
CLIP4-204ENST00000404424 ITM2AO43736 263 aa11.04□□□□□ -0.64
CLIP4-204ENST00000404424 SMIM24O75264 130 aa11.04□□□□□ -0.64
CLIP4-204ENST00000404424 TOP3BO95985 862 aaKnown RBP11.04□□□□□ -0.64
CLIP4-204ENST00000404424 IREB2P48200 963 aaKnown RBP11.04□□□□□ -0.64
CLIP4-204ENST00000404424 CDK7P50613 346 aa11.04□□□□□ -0.64
CLIP4-204ENST00000404424 ATXN1P54253 815 aaKnown RBP11.04□□□□□ -0.64
CLIP4-204ENST00000404424 IRX4P78413 519 aa11.04□□□□□ -0.64
CLIP4-204ENST00000404424 PDE1BQ01064 536 aa11.04□□□□□ -0.64
CLIP4-204ENST00000404424 PCLAFQ15004 111 aa11.04□□□□□ -0.64
CLIP4-204ENST00000404424 SOWAHAQ2M3V2 549 aa11.04□□□□□ -0.64
CLIP4-204ENST00000404424 CCDC153Q494R4 210 aa11.04□□□□□ -0.64
CLIP4-204ENST00000404424 EFHC1Q5JVL4 640 aa11.04□□□□□ -0.64
CLIP4-204ENST00000404424 NAIF1Q69YI7 327 aaPredicted RBP11.04□□□□□ -0.64
CLIP4-204ENST00000404424 C16orf46Q6P387 395 aa11.04□□□□□ -0.64
CLIP4-204ENST00000404424 RFX8Q6ZV50 586 aa11.04□□□□□ -0.64
CLIP4-204ENST00000404424 ERO1BQ86YB8 467 aa11.04□□□□□ -0.64
CLIP4-204ENST00000404424 CRYBG2Q8N1P7 616 aa11.04□□□□□ -0.64
CLIP4-204ENST00000404424 CCDC185Q8N715 623 aa11.04□□□□□ -0.64
CLIP4-204ENST00000404424 C7orf31Q8N865 590 aa11.04□□□□□ -0.64
CLIP4-204ENST00000404424 PPTC7Q8NI37 304 aa11.04□□□□□ -0.64
CLIP4-204ENST00000404424 CLPTM1LQ96KA5 538 aa11.04□□□□□ -0.64
CLIP4-204ENST00000404424 ZNF778Q96MU6 729 aa11.04□□□□□ -0.64
CLIP4-204ENST00000404424 TRAPPC9Q96Q05 1148 aa11.04□□□□□ -0.64
CLIP4-204ENST00000404424 TXNDC16Q9P2K2 825 aa11.04□□□□□ -0.64
CLIP4-204ENST00000404424 FZD10Q9ULW2 581 aa11.04□□□□□ -0.64
CLIP4-204ENST00000404424 NME7Q9Y5B8 376 aa11.04□□□□□ -0.64
CLIP4-204ENST00000404424 CCNT2O60583 730 aaKnown RBP11.03□□□□□ -0.64
CLIP4-204ENST00000404424 PROCP04070 461 aa11.03□□□□□ -0.64
CLIP4-204ENST00000404424 POLBP06746 335 aa11.03□□□□□ -0.64
CLIP4-204ENST00000404424 C6orf222P0C671 652 aaPredicted RBP11.03□□□□□ -0.64
CLIP4-204ENST00000404424 GOT1P17174 413 aa11.03□□□□□ -0.64
CLIP4-204ENST00000404424 MX2P20592 715 aa11.03□□□□□ -0.64
CLIP4-204ENST00000404424 ADORA2AP29274 412 aa11.03□□□□□ -0.64
CLIP4-204ENST00000404424 COPAP53621 1224 aa11.03□□□□□ -0.64
CLIP4-204ENST00000404424 ZBTB6Q15916 424 aa11.03□□□□□ -0.64
CLIP4-204ENST00000404424 GRTP1Q5TC63 336 aa11.03□□□□□ -0.64
CLIP4-204ENST00000404424 KBTBD2Q8IY47 623 aa11.03□□□□□ -0.64
CLIP4-204ENST00000404424 GPC2Q8N158 579 aa11.03□□□□□ -0.64
CLIP4-204ENST00000404424 CLEC4CQ8WTT0 213 aa11.03□□□□□ -0.64
CLIP4-204ENST00000404424 CMTM5Q96DZ9 223 aa11.03□□□□□ -0.64
CLIP4-204ENST00000404424 IFT43Q96FT9 208 aa11.03□□□□□ -0.64
CLIP4-204ENST00000404424 SNX27Q96L92 541 aa11.03□□□□□ -0.64
CLIP4-204ENST00000404424 CPNE1Q99829 537 aa11.03□□□□□ -0.64
CLIP4-204ENST00000404424 CCDC28BQ9BUN5 200 aa11.03□□□□□ -0.64
CLIP4-204ENST00000404424 COPG2Q9UBF2 871 aa11.03□□□□□ -0.64
CLIP4-204ENST00000404424 SIN3BO75182 1162 aa11.03□□□□□ -0.64
CLIP4-204ENST00000404424 LYPLA1O75608 230 aaPredicted RBP11.03□□□□□ -0.64
CLIP4-204ENST00000404424 LCP1P13796 627 aa11.03□□□□□ -0.64
CLIP4-204ENST00000404424 MGAT1P26572 445 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms