RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 UMODL1Q5DID0 1318 aa18.62■□□□□ 0.57
COL18A1-204ENST00000400337 TOMM70O94826 608 aa18.62■□□□□ 0.57
COL18A1-204ENST00000400337 DDHD2O94830 711 aa18.62■□□□□ 0.57
COL18A1-204ENST00000400337 APOA1P02647 267 aa18.62■□□□□ 0.57
COL18A1-204ENST00000400337 CAPSQ13938 189 aa18.62■□□□□ 0.57
COL18A1-204ENST00000400337 ZNF470Q6ECI4 717 aa18.62■□□□□ 0.57
COL18A1-204ENST00000400337 FAM71AQ8IYT1 594 aa18.62■□□□□ 0.57
COL18A1-204ENST00000400337 APOPT1Q96IL0 206 aa18.62■□□□□ 0.57
COL18A1-204ENST00000400337 CTNNAL1Q9UBT7 734 aa18.62■□□□□ 0.57
COL18A1-204ENST00000400337 MAFO75444 373 aaPredicted RBP18.62■□□□□ 0.57
COL18A1-204ENST00000400337 SLC1A6P48664 564 aa18.62■□□□□ 0.57
COL18A1-204ENST00000400337 NPY2RP49146 381 aa18.62■□□□□ 0.57
COL18A1-204ENST00000400337 FAAP100Q0VG06 881 aa18.62■□□□□ 0.57
COL18A1-204ENST00000400337 CAMK2GQ13555 558 aaPredicted RBP18.62■□□□□ 0.57
COL18A1-204ENST00000400337 TTC33Q6PID6 262 aaPredicted RBP18.62■□□□□ 0.57
COL18A1-204ENST00000400337 A0A096LPK6 155 aa18.62■□□□□ 0.57
COL18A1-204ENST00000400337 ITGB6P18564 788 aa18.62■□□□□ 0.57
COL18A1-204ENST00000400337 MLH1P40692 756 aa18.62■□□□□ 0.57
COL18A1-204ENST00000400337 TNFSF9P41273 254 aa18.62■□□□□ 0.57
COL18A1-204ENST00000400337 CDC16Q13042 620 aa18.62■□□□□ 0.57
COL18A1-204ENST00000400337 WSCD1Q658N2 575 aa18.62■□□□□ 0.57
COL18A1-204ENST00000400337 SLC22A9Q8IVM8 553 aa18.62■□□□□ 0.57
COL18A1-204ENST00000400337 EXOSC4Q9NPD3 245 aaKnown RBP18.62■□□□□ 0.57
COL18A1-204ENST00000400337 SIGLEC16A6NMB1 481 aa18.62■□□□□ 0.57
COL18A1-204ENST00000400337 HACD1B0YJ81 288 aa18.62■□□□□ 0.57
COL18A1-204ENST00000400337 ACADSP16219 412 aa18.62■□□□□ 0.57
COL18A1-204ENST00000400337 SCNN1GP51170 649 aa18.62■□□□□ 0.57
COL18A1-204ENST00000400337 MRPS35P82673 323 aaKnown RBP18.62■□□□□ 0.57
COL18A1-204ENST00000400337 ECM1Q16610 540 aa18.62■□□□□ 0.57
COL18A1-204ENST00000400337 CYP51A1Q16850 503 aa18.62■□□□□ 0.57
COL18A1-204ENST00000400337 ATP6AP1LQ52LC2 224 aa18.62■□□□□ 0.57
COL18A1-204ENST00000400337 SPANXN3Q5MJ09 141 aa18.62■□□□□ 0.57
COL18A1-204ENST00000400337 PRAMEF19Q5SWL8 479 aa18.62■□□□□ 0.57
COL18A1-204ENST00000400337 MIER2Q8N344 545 aa18.62■□□□□ 0.57
COL18A1-204ENST00000400337 ZCCHC9Q8N567 271 aaKnown RBP18.62■□□□□ 0.57
COL18A1-204ENST00000400337 BAP1Q92560 729 aa18.62■□□□□ 0.57
COL18A1-204ENST00000400337 APBA2Q99767 749 aa18.62■□□□□ 0.57
COL18A1-204ENST00000400337 H2AFY2Q9P0M6 372 aaPredicted RBP18.62■□□□□ 0.57
COL18A1-204ENST00000400337 ZNF711Q9Y462 761 aa18.62■□□□□ 0.57
COL18A1-204ENST00000400337 ENO4A6NNW6 628 aa18.61■□□□□ 0.57
COL18A1-204ENST00000400337 UBDO15205 165 aa18.61■□□□□ 0.57
COL18A1-204ENST00000400337 ZNF23P17027 643 aa18.61■□□□□ 0.57
COL18A1-204ENST00000400337 CNGA2Q16280 664 aa18.61■□□□□ 0.57
COL18A1-204ENST00000400337 AGKQ53H12 422 aa18.61■□□□□ 0.57
COL18A1-204ENST00000400337 LGI2Q8N0V4 545 aa18.61■□□□□ 0.57
COL18A1-204ENST00000400337 RMND5AQ9H871 391 aa18.61■□□□□ 0.57
COL18A1-204ENST00000400337 NRCAMQ92823 1304 aa18.61■□□□□ 0.57
COL18A1-204ENST00000400337 SERPINE1P05121 402 aa18.61■□□□□ 0.57
COL18A1-204ENST00000400337 CKBP12277 381 aa18.61■□□□□ 0.57
COL18A1-204ENST00000400337 PTPN1P18031 435 aaKnown RBP18.61■□□□□ 0.57
COL18A1-204ENST00000400337 PTPN4P29074 926 aa18.61■□□□□ 0.57
COL18A1-204ENST00000400337 OOSP2Q86WS3 158 aa18.61■□□□□ 0.57
COL18A1-204ENST00000400337 SLC44A2Q8IWA5 706 aaPredicted RBP18.61■□□□□ 0.57
COL18A1-204ENST00000400337 PRKD2Q9BZL6 878 aa18.61■□□□□ 0.57
COL18A1-204ENST00000400337 TCF7L2Q9NQB0 619 aa18.61■□□□□ 0.57
COL18A1-204ENST00000400337 PLA2G4CQ9UP65 541 aa18.61■□□□□ 0.57
COL18A1-204ENST00000400337 RCCD1A6NED2 376 aa18.61■□□□□ 0.57
COL18A1-204ENST00000400337 BTG3Q14201 252 aaPredicted RBP18.61■□□□□ 0.57
COL18A1-204ENST00000400337 PGS1Q32NB8 556 aa18.61■□□□□ 0.57
COL18A1-204ENST00000400337 CXCL17Q6UXB2 119 aa18.61■□□□□ 0.57
COL18A1-204ENST00000400337 SLC9A9Q8IVB4 645 aa18.61■□□□□ 0.57
COL18A1-204ENST00000400337 ZFYVE19Q96K21 471 aa18.61■□□□□ 0.57
COL18A1-204ENST00000400337 CYP1A2P05177 515 aa18.61■□□□□ 0.57
COL18A1-204ENST00000400337 ETS1P14921 441 aa18.61■□□□□ 0.57
COL18A1-204ENST00000400337 MAPK1P28482 360 aa18.61■□□□□ 0.57
COL18A1-204ENST00000400337 NEK2P51955 445 aa18.61■□□□□ 0.57
COL18A1-204ENST00000400337 TP53BP2Q13625 1128 aa18.61■□□□□ 0.57
COL18A1-204ENST00000400337 C11orf74Q86VG3 221 aa18.61■□□□□ 0.57
COL18A1-204ENST00000400337 ACOX2Q99424 681 aa18.61■□□□□ 0.57
COL18A1-204ENST00000400337 CDT1Q9H211 546 aa18.61■□□□□ 0.57
COL18A1-204ENST00000400337 ACTR8Q9H981 624 aa18.61■□□□□ 0.57
COL18A1-204ENST00000400337 CAPN10Q9HC96 672 aa18.61■□□□□ 0.57
COL18A1-204ENST00000400337 BAIAP3O94812 1187 aa18.6■□□□□ 0.57
COL18A1-204ENST00000400337 HALP42357 657 aa18.6■□□□□ 0.57
COL18A1-204ENST00000400337 PCYT1AP49585 367 aa18.6■□□□□ 0.57
COL18A1-204ENST00000400337 CCDC153Q494R4 210 aa18.6■□□□□ 0.57
COL18A1-204ENST00000400337 TMEM86AQ8N2M4 240 aa18.6■□□□□ 0.57
COL18A1-204ENST00000400337 CPNE1Q99829 537 aa18.6■□□□□ 0.57
COL18A1-204ENST00000400337 RGS18Q9NS28 235 aa18.6■□□□□ 0.57
COL18A1-204ENST00000400337 RAD54BQ9Y620 910 aa18.6■□□□□ 0.57
COL18A1-204ENST00000400337 CHRNB3Q05901 458 aa18.6■□□□□ 0.57
COL18A1-204ENST00000400337 FUT2Q10981 343 aa18.6■□□□□ 0.57
COL18A1-204ENST00000400337 BBS7Q8IWZ6 715 aa18.6■□□□□ 0.57
COL18A1-204ENST00000400337 TBL1YQ9BQ87 522 aa18.6■□□□□ 0.57
COL18A1-204ENST00000400337 ELOVL6Q9H5J4 265 aa18.6■□□□□ 0.57
COL18A1-204ENST00000400337 HSPA13P48723 471 aa18.6■□□□□ 0.57
COL18A1-204ENST00000400337 UGCGQ16739 394 aa18.6■□□□□ 0.57
COL18A1-204ENST00000400337 ATP13A4Q4VNC1 1196 aa18.6■□□□□ 0.57
COL18A1-204ENST00000400337 UNC93AQ86WB7 457 aa18.6■□□□□ 0.57
COL18A1-204ENST00000400337 WNT8BQ93098 351 aa18.6■□□□□ 0.57
COL18A1-204ENST00000400337 CATSPER2Q96P56 530 aa18.6■□□□□ 0.57
COL18A1-204ENST00000400337 PPP1R10Q96QC0 940 aaKnown RBP18.6■□□□□ 0.57
COL18A1-204ENST00000400337 ACO2Q99798 780 aaKnown RBP18.6■□□□□ 0.57
COL18A1-204ENST00000400337 TRIM13O60858 407 aa18.6■□□□□ 0.57
COL18A1-204ENST00000400337 RNASEH1O60930 286 aaKnown RBP18.6■□□□□ 0.57
COL18A1-204ENST00000400337 GUCA1CO95843 209 aa18.6■□□□□ 0.57
COL18A1-204ENST00000400337 PEX5P50542 639 aa18.6■□□□□ 0.57
COL18A1-204ENST00000400337 NPNTQ6UXI9 565 aa18.6■□□□□ 0.57
COL18A1-204ENST00000400337 USP1O94782 785 aa18.6■□□□□ 0.57
COL18A1-204ENST00000400337 RTN3O95197 1032 aaPredicted RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms