RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 CDH4P55283 916 aa7.8□□□□□ -1.16
USP16-204ENST00000399976 ZNF33AQ06730 810 aa7.8□□□□□ -1.16
USP16-204ENST00000399976 DHCR24Q15392 516 aa7.8□□□□□ -1.16
USP16-204ENST00000399976 DPYSL2Q16555 572 aa7.8□□□□□ -1.16
USP16-204ENST00000399976 ZNF528Q3MIS6 628 aa7.8□□□□□ -1.16
USP16-204ENST00000399976 SLC44A4Q53GD3 710 aa7.8□□□□□ -1.16
USP16-204ENST00000399976 DCAF6Q58WW2 860 aa7.8□□□□□ -1.16
USP16-204ENST00000399976 PIK3R6Q5UE93 754 aa7.8□□□□□ -1.16
USP16-204ENST00000399976 ZNF852Q6ZMS4 543 aa7.8□□□□□ -1.16
USP16-204ENST00000399976 RIN3Q8TB24 985 aa7.8□□□□□ -1.16
USP16-204ENST00000399976 FAM149B1Q96BN6 582 aa7.8□□□□□ -1.16
USP16-204ENST00000399976 PIWIL1Q96J94 861 aaKnown RBP7.8□□□□□ -1.16
USP16-204ENST00000399976 IRF2BPLQ9H1B7 796 aa7.8□□□□□ -1.16
USP16-204ENST00000399976 CHRDQ9H2X0 955 aa7.8□□□□□ -1.16
USP16-204ENST00000399976 TAS2R14Q9NYV8 317 aa7.8□□□□□ -1.16
USP16-204ENST00000399976 FZD10Q9ULW2 581 aa7.8□□□□□ -1.16
USP16-204ENST00000399976 EFR3BQ9Y2G0 817 aa7.8□□□□□ -1.16
USP16-204ENST00000399976 TBC1D30Q9Y2I9 924 aa7.8□□□□□ -1.16
USP16-204ENST00000399976 A0A1B0GVM2 712 aa7.8□□□□□ -1.16
USP16-204ENST00000399976 KANSL1LA0AUZ9 987 aa7.8□□□□□ -1.16
USP16-204ENST00000399976 TCAF2A6NFQ2 919 aa7.8□□□□□ -1.16
USP16-204ENST00000399976 SPECC1L-ADORA2AF8WAN1 911 aa7.8□□□□□ -1.16
USP16-204ENST00000399976 CCP110O43303 1012 aa7.8□□□□□ -1.16
USP16-204ENST00000399976 PSTPIP1O43586 416 aa7.8□□□□□ -1.16
USP16-204ENST00000399976 CLDN11O75508 207 aa7.8□□□□□ -1.16
USP16-204ENST00000399976 RNF8O76064 485 aa7.8□□□□□ -1.16
USP16-204ENST00000399976 KLKB1P03952 638 aa7.8□□□□□ -1.16
USP16-204ENST00000399976 RFC1P35251 1148 aaPredicted RBP7.8□□□□□ -1.16
USP16-204ENST00000399976 ADRA1BP35368 520 aa7.8□□□□□ -1.16
USP16-204ENST00000399976 HDAC4P56524 1084 aa7.8□□□□□ -1.16
USP16-204ENST00000399976 TAZQ16635 292 aa7.8□□□□□ -1.16
USP16-204ENST00000399976 SLFN11Q7Z7L1 901 aa7.8□□□□□ -1.16
USP16-204ENST00000399976 LRRC8AQ8IWT6 810 aa7.8□□□□□ -1.16
USP16-204ENST00000399976 PLPP6Q8IY26 295 aa7.8□□□□□ -1.16
USP16-204ENST00000399976 CASKIN2Q8WXE0 1202 aa7.8□□□□□ -1.16
USP16-204ENST00000399976 CD101Q93033 1021 aa7.8□□□□□ -1.16
USP16-204ENST00000399976 TTC17Q96AE7 1141 aa7.8□□□□□ -1.16
USP16-204ENST00000399976 FAF2Q96CS3 445 aa7.8□□□□□ -1.16
USP16-204ENST00000399976 CHP1Q99653 195 aa7.8□□□□□ -1.16
USP16-204ENST00000399976 KXD1Q9BQD3 176 aa7.8□□□□□ -1.16
USP16-204ENST00000399976 WDCPQ9H6R7 721 aa7.8□□□□□ -1.16
USP16-204ENST00000399976 PIGVQ9NUD9 493 aa7.8□□□□□ -1.16
USP16-204ENST00000399976 DDIT4Q9NX09 232 aa7.8□□□□□ -1.16
USP16-204ENST00000399976 DDX56Q9NY93 547 aaKnown RBP7.8□□□□□ -1.16
USP16-204ENST00000399976 TJP2Q9UDY2 1190 aa7.8□□□□□ -1.16
USP16-204ENST00000399976 PCDHA13Q9Y5I0 950 aa7.8□□□□□ -1.16
USP16-204ENST00000399976 M0QYT0 321 aa7.79□□□□□ -1.16
USP16-204ENST00000399976 CSPG5O95196 566 aa7.79□□□□□ -1.16
USP16-204ENST00000399976 CALCAP01258 141 aa7.79□□□□□ -1.16
USP16-204ENST00000399976 PLEKP08567 350 aaPredicted RBP7.79□□□□□ -1.16
USP16-204ENST00000399976 KRT7P08729 469 aa7.79□□□□□ -1.16
USP16-204ENST00000399976 CISD3P0C7P0 127 aa7.79□□□□□ -1.16
USP16-204ENST00000399976 GJA1P17302 382 aa7.79□□□□□ -1.16
USP16-204ENST00000399976 TACR2P21452 398 aa7.79□□□□□ -1.16
USP16-204ENST00000399976 GRIA2P42262 883 aa7.79□□□□□ -1.16
USP16-204ENST00000399976 ARID5AQ03989 594 aa7.79□□□□□ -1.16
USP16-204ENST00000399976 SULT2A1Q06520 285 aa7.79□□□□□ -1.16
USP16-204ENST00000399976 TNK2Q07912 1038 aa7.79□□□□□ -1.16
USP16-204ENST00000399976 ZNF252P-AS1Q0IIN9 211 aa7.79□□□□□ -1.16
USP16-204ENST00000399976 PDK2Q15119 407 aa7.79□□□□□ -1.16
USP16-204ENST00000399976 HS1BP3Q53T59 392 aa7.79□□□□□ -1.16
USP16-204ENST00000399976 DCUN1D2Q6PH85 259 aa7.79□□□□□ -1.16
USP16-204ENST00000399976 RHBDF2Q6PJF5 856 aa7.79□□□□□ -1.16
USP16-204ENST00000399976 LZTR1Q8N653 840 aa7.79□□□□□ -1.16
USP16-204ENST00000399976 ZNF564Q8TBZ8 553 aaPredicted RBP7.79□□□□□ -1.16
USP16-204ENST00000399976 SPOCK2Q92563 424 aa7.79□□□□□ -1.16
USP16-204ENST00000399976 TSC1Q92574 1164 aa7.79□□□□□ -1.16
USP16-204ENST00000399976 GKN1Q9NS71 199 aa7.79□□□□□ -1.16
USP16-204ENST00000399976 TMEM248Q9NWD8 314 aa7.79□□□□□ -1.16
USP16-204ENST00000399976 ZNF212Q9UDV6 495 aa7.79□□□□□ -1.16
USP16-204ENST00000399976 CDH22Q9UJ99 828 aa7.79□□□□□ -1.16
USP16-204ENST00000399976 NEU3Q9UQ49 428 aa7.79□□□□□ -1.16
USP16-204ENST00000399976 TNRC6BQ9UPQ9 1833 aaKnown RBP7.79□□□□□ -1.16
USP16-204ENST00000399976 GOLGA6L9A6NEM1 432 aa7.79□□□□□ -1.16
USP16-204ENST00000399976 F5H5T6 163 aa7.79□□□□□ -1.16
USP16-204ENST00000399976 ATG13O75143 517 aa7.79□□□□□ -1.16
USP16-204ENST00000399976 SRPRAP08240 638 aaKnown RBP7.79□□□□□ -1.16
USP16-204ENST00000399976 AOC1P19801 751 aa7.79□□□□□ -1.16
USP16-204ENST00000399976 CTNNA2P26232 953 aa7.79□□□□□ -1.16
USP16-204ENST00000399976 GJA4P35212 333 aa7.79□□□□□ -1.16
USP16-204ENST00000399976 OPRD1P41143 372 aa7.79□□□□□ -1.16
USP16-204ENST00000399976 VIPR2P41587 438 aa7.79□□□□□ -1.16
USP16-204ENST00000399976 ARSEP51690 589 aa7.79□□□□□ -1.16
USP16-204ENST00000399976 YBEYP58557 167 aaPredicted RBP7.79□□□□□ -1.16
USP16-204ENST00000399976 COPS2P61201 443 aa7.79□□□□□ -1.16
USP16-204ENST00000399976 GFPT1Q06210 699 aaPredicted RBP7.79□□□□□ -1.16
USP16-204ENST00000399976 CCINQ13939 588 aa7.79□□□□□ -1.16
USP16-204ENST00000399976 HADHQ16836 314 aaKnown RBP7.79□□□□□ -1.16
USP16-204ENST00000399976 NADSYN1Q6IA69 706 aa7.79□□□□□ -1.16
USP16-204ENST00000399976 BBS7Q8IWZ6 715 aa7.79□□□□□ -1.16
USP16-204ENST00000399976 SYCE1Q8N0S2 351 aa7.79□□□□□ -1.16
USP16-204ENST00000399976 JOSD2Q8TAC2 188 aa7.79□□□□□ -1.16
USP16-204ENST00000399976 CPLX3Q8WVH0 158 aa7.79□□□□□ -1.16
USP16-204ENST00000399976 MCEEQ96PE7 176 aa7.79□□□□□ -1.16
USP16-204ENST00000399976 CYP2S1Q96SQ9 504 aa7.79□□□□□ -1.16
USP16-204ENST00000399976 PNKPQ96T60 521 aa7.79□□□□□ -1.16
USP16-204ENST00000399976 NUP85Q9BW27 656 aa7.79□□□□□ -1.16
USP16-204ENST00000399976 FAM126AQ9BYI3 521 aaPredicted RBP7.79□□□□□ -1.16
USP16-204ENST00000399976 THAP2Q9H0W7 228 aa7.79□□□□□ -1.16
USP16-204ENST00000399976 LTB4R2Q9NPC1 389 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms