RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 CAVIN3Q969G5 261 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 DNAJC19Q96DA6 116 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 MTFMTQ96DP5 389 aaKnown RBP3.34□□□□□ -1.87
KNL1-202ENST00000399668 COLEC11Q9BWP8 271 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 SENP6Q9GZR1 1112 aaPredicted RBP3.34□□□□□ -1.87
KNL1-202ENST00000399668 DNAJC18Q9H819 358 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 PPCSQ9HAB8 311 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 NOD2Q9HC29 1040 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 STARD7Q9NQZ5 370 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 PDGFCQ9NRA1 345 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 NSMCE4AQ9NXX6 385 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 WWOXQ9NZC7 414 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 LAMA3Q16787 3333 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 FRMPD4Q14CM0 1322 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 UBR3Q6ZT12 1888 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 KDM4FA0A1W2PPD8 638 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 SLC12A8A0AV02 714 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 WDR27A2RRH5 827 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 ANKRD63C9JTQ0 380 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 PROSCO94903 275 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 HSPA1AP0DMV8 641 aaKnown RBP3.34□□□□□ -1.87
KNL1-202ENST00000399668 HSPA1BP0DMV9 641 aaKnown RBP3.34□□□□□ -1.87
KNL1-202ENST00000399668 SLC2A3P11169 496 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 NQO1P15559 274 aaKnown RBP3.34□□□□□ -1.87
KNL1-202ENST00000399668 TNFSF9P41273 254 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 AQP5P55064 265 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 CYLC2Q14093 348 aaPredicted RBP3.34□□□□□ -1.87
KNL1-202ENST00000399668 PGS1Q32NB8 556 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 POM121L1PQ3SYA9 428 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 MRNIPQ6NTE8 343 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 ARHGAP18Q8N392 663 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 ZNF513Q8N8E2 541 aaPredicted RBP3.34□□□□□ -1.87
KNL1-202ENST00000399668 THAP11Q96EK4 314 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 CLPBQ9H078 707 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 FBXO44Q9H4M3 255 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 PCDH9Q9HC56 1237 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 UBQLN1Q9UMX0 589 aaKnown RBP3.34□□□□□ -1.87
KNL1-202ENST00000399668 SIK3Q9Y2K2 1263 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 ZNF711Q9Y462 761 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 SCN4AP35499 1836 aa3.34□□□□□ -1.87
KNL1-202ENST00000399668 MEI4A8MW99 385 aa3.34□□□□□ -1.88
KNL1-202ENST00000399668 C5orf58C9J3I9 102 aa3.34□□□□□ -1.88
KNL1-202ENST00000399668 RNF103O00237 685 aa3.34□□□□□ -1.88
KNL1-202ENST00000399668 XPO1O14980 1071 aaKnown RBP3.34□□□□□ -1.88
KNL1-202ENST00000399668 TM9SF1O15321 606 aa3.34□□□□□ -1.88
KNL1-202ENST00000399668 DCXO43602 365 aa3.34□□□□□ -1.88
KNL1-202ENST00000399668 SRP72O76094 671 aaKnown RBP3.34□□□□□ -1.88
KNL1-202ENST00000399668 LTFP02788 710 aa3.34□□□□□ -1.88
KNL1-202ENST00000399668 CCND1P24385 295 aa3.34□□□□□ -1.88
KNL1-202ENST00000399668 ZNF844Q08AG5 666 aa3.34□□□□□ -1.88
KNL1-202ENST00000399668 ITIH4Q14624 930 aa3.34□□□□□ -1.88
KNL1-202ENST00000399668 TMEM132BQ14DG7 1078 aa3.34□□□□□ -1.88
KNL1-202ENST00000399668 AASDHQ4L235 1098 aaPredicted RBP3.34□□□□□ -1.88
KNL1-202ENST00000399668 MIIPQ5JXC2 388 aa3.34□□□□□ -1.88
KNL1-202ENST00000399668 C16orf46Q6P387 395 aa3.34□□□□□ -1.88
KNL1-202ENST00000399668 SPOCD1Q6ZMY3 1216 aa3.34□□□□□ -1.88
KNL1-202ENST00000399668 CCDC81Q6ZN84 652 aa3.34□□□□□ -1.88
KNL1-202ENST00000399668 NLRP9Q7RTR0 991 aa3.34□□□□□ -1.88
KNL1-202ENST00000399668 NETO2Q8NC67 525 aa3.34□□□□□ -1.88
KNL1-202ENST00000399668 ARRDC4Q8NCT1 418 aa3.34□□□□□ -1.88
KNL1-202ENST00000399668 EPS8L1Q8TE68 723 aa3.34□□□□□ -1.88
KNL1-202ENST00000399668 MKL1Q969V6 931 aa3.34□□□□□ -1.88
KNL1-202ENST00000399668 KCNK16Q96T55 309 aa3.34□□□□□ -1.88
KNL1-202ENST00000399668 MTG1Q9BT17 334 aaPredicted RBP3.34□□□□□ -1.88
KNL1-202ENST00000399668 ZNF518BQ9C0D4 1074 aa3.34□□□□□ -1.88
KNL1-202ENST00000399668 CAAP1Q9H8G2 361 aa3.34□□□□□ -1.88
KNL1-202ENST00000399668 CYP3A43Q9HB55 503 aa3.34□□□□□ -1.88
KNL1-202ENST00000399668 KCNMB3Q9NPA1 279 aa3.34□□□□□ -1.88
KNL1-202ENST00000399668 IMPAD1Q9NX62 359 aa3.34□□□□□ -1.88
KNL1-202ENST00000399668 UTP6Q9NYH9 597 aaKnown RBP3.34□□□□□ -1.88
KNL1-202ENST00000399668 CYP39A1Q9NYL5 469 aa3.34□□□□□ -1.88
KNL1-202ENST00000399668 IL1RAPL1Q9NZN1 696 aa3.34□□□□□ -1.88
KNL1-202ENST00000399668 SNX8Q9Y5X2 465 aa3.34□□□□□ -1.88
KNL1-202ENST00000399668 CRYBG1Q9Y4K1 1723 aa3.34□□□□□ -1.88
KNL1-202ENST00000399668 SPTAN1Q13813 2472 aaKnown RBP3.34□□□□□ -1.88
KNL1-202ENST00000399668 STX7O15400 261 aaKnown RBP3.34□□□□□ -1.88
KNL1-202ENST00000399668 STRNO43815 780 aa3.34□□□□□ -1.88
KNL1-202ENST00000399668 ALBP02768 609 aa3.34□□□□□ -1.88
KNL1-202ENST00000399668 APOA4P06727 396 aa3.34□□□□□ -1.88
KNL1-202ENST00000399668 PCNAP12004 261 aa3.34□□□□□ -1.88
KNL1-202ENST00000399668 FGFR3P22607 806 aa3.34□□□□□ -1.88
KNL1-202ENST00000399668 MARCKSL1P49006 195 aa3.34□□□□□ -1.88
KNL1-202ENST00000399668 SLC16A1P53985 500 aa3.34□□□□□ -1.88
KNL1-202ENST00000399668 BST2Q10589 180 aaKnown RBP3.34□□□□□ -1.88
KNL1-202ENST00000399668 ZBTB17Q13105 803 aa3.34□□□□□ -1.88
KNL1-202ENST00000399668 CSHL1Q14406 222 aa3.34□□□□□ -1.88
KNL1-202ENST00000399668 SNX17Q15036 470 aa3.34□□□□□ -1.88
KNL1-202ENST00000399668 MEA1Q16626 185 aa3.34□□□□□ -1.88
KNL1-202ENST00000399668 GLT6D1Q7Z4J2 308 aa3.34□□□□□ -1.88
KNL1-202ENST00000399668 CACUL1Q86Y37 369 aa3.34□□□□□ -1.88
KNL1-202ENST00000399668 TEKT4Q8WW24 435 aa3.34□□□□□ -1.88
KNL1-202ENST00000399668 SMARCD1Q96GM5 515 aa3.34□□□□□ -1.88
KNL1-202ENST00000399668 VCPIP1Q96JH7 1222 aa3.34□□□□□ -1.88
KNL1-202ENST00000399668 CATSPER2Q96P56 530 aa3.34□□□□□ -1.88
KNL1-202ENST00000399668 MAN1C1Q9NR34 630 aa3.34□□□□□ -1.88
KNL1-202ENST00000399668 ZNF446Q9NWS9 450 aa3.34□□□□□ -1.88
KNL1-202ENST00000399668 GPRC5DQ9NZD1 345 aa3.34□□□□□ -1.88
KNL1-202ENST00000399668 DSEQ9UL01 958 aa3.34□□□□□ -1.88
KNL1-202ENST00000399668 ATRNO75882 1429 aa3.33□□□□□ -1.88
KNL1-202ENST00000399668 EPHB6O15197 1021 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms