RNA–Protein interactions for RNA: ENST00000399353.5

ITSN1-210, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-210ENST00000399353 ARP10275 920 aa15.27■□□□□ 0.04
ITSN1-210ENST00000399353 ARPC4P59998 168 aa15.27■□□□□ 0.04
ITSN1-210ENST00000399353 MMRN1Q13201 1228 aa15.27■□□□□ 0.04
ITSN1-210ENST00000399353 DHRS1Q96LJ7 313 aa15.27■□□□□ 0.04
ITSN1-210ENST00000399353 DDX4Q9NQI0 724 aaKnown RBP15.27■□□□□ 0.04
ITSN1-210ENST00000399353 GIN1Q9NXP7 522 aa15.27■□□□□ 0.04
ITSN1-210ENST00000399353 ITGB1BP2Q9UKP3 347 aa15.27■□□□□ 0.04
ITSN1-210ENST00000399353 SNCAIPQ9Y6H5 919 aa15.27■□□□□ 0.04
ITSN1-210ENST00000399353 SF3B1O75533 1304 aaKnown RBP eCLIP15.27■□□□□ 0.03
ITSN1-210ENST00000399353 MEIS2O14770 477 aa15.27■□□□□ 0.03
ITSN1-210ENST00000399353 RAD23AP54725 363 aa15.27■□□□□ 0.03
ITSN1-210ENST00000399353 MRPS15P82914 257 aaKnown RBP15.27■□□□□ 0.03
ITSN1-210ENST00000399353 CCDC153Q494R4 210 aa15.27■□□□□ 0.03
ITSN1-210ENST00000399353 ADGRG6Q86SQ4 1221 aa15.27■□□□□ 0.03
ITSN1-210ENST00000399353 Q8N9G6 341 aaPredicted RBP15.27■□□□□ 0.03
ITSN1-210ENST00000399353 SGF29Q96ES7 293 aa15.27■□□□□ 0.03
ITSN1-210ENST00000399353 KLC2Q9H0B6 622 aa15.27■□□□□ 0.03
ITSN1-210ENST00000399353 UPF3AQ9H1J1 476 aaKnown RBP15.27■□□□□ 0.03
ITSN1-210ENST00000399353 MOSPD1Q9UJG1 213 aa15.27■□□□□ 0.03
ITSN1-210ENST00000399353 ITGA11Q9UKX5 1188 aa15.27■□□□□ 0.03
ITSN1-210ENST00000399353 LRP6O75581 1613 aa15.27■□□□□ 0.03
ITSN1-210ENST00000399353 hCG_1818297A0A087WSY0 165 aa15.26■□□□□ 0.03
ITSN1-210ENST00000399353 PPEF1O14829 653 aaPredicted RBP15.26■□□□□ 0.03
ITSN1-210ENST00000399353 AOC1P19801 751 aa15.26■□□□□ 0.03
ITSN1-210ENST00000399353 CASP2P42575 452 aa15.26■□□□□ 0.03
ITSN1-210ENST00000399353 NME5P56597 212 aa15.26■□□□□ 0.03
ITSN1-210ENST00000399353 TFAMQ00059 246 aaKnown RBP15.26■□□□□ 0.03
ITSN1-210ENST00000399353 OGFRL1Q5TC84 451 aaPredicted RBP15.26■□□□□ 0.03
ITSN1-210ENST00000399353 ARHGEF16Q5VV41 709 aa15.26■□□□□ 0.03
ITSN1-210ENST00000399353 HNRNPABQ99729 332 aaKnown RBP15.26■□□□□ 0.03
ITSN1-210ENST00000399353 DGCR6LQ9BY27 220 aa15.26■□□□□ 0.03
ITSN1-210ENST00000399353 GPATCH2LQ9NWQ4 482 aa15.26■□□□□ 0.03
ITSN1-210ENST00000399353 GINS2Q9Y248 185 aa15.26■□□□□ 0.03
ITSN1-210ENST00000399353 ECM29Q5VYK3 1845 aa15.26■□□□□ 0.03
ITSN1-210ENST00000399353 TNS2Q63HR2 1409 aa15.26■□□□□ 0.03
ITSN1-210ENST00000399353 TRIM64CA6NLI5 447 aa15.26■□□□□ 0.03
ITSN1-210ENST00000399353 ZNF23P17027 643 aa15.26■□□□□ 0.03
ITSN1-210ENST00000399353 HSF5Q4G112 596 aaPredicted RBP15.26■□□□□ 0.03
ITSN1-210ENST00000399353 CDC42EP5Q6NZY7 148 aa15.26■□□□□ 0.03
ITSN1-210ENST00000399353 TRIM72Q6ZMU5 477 aa15.26■□□□□ 0.03
ITSN1-210ENST00000399353 ZNF276Q8N554 614 aa15.26■□□□□ 0.03
ITSN1-210ENST00000399353 RNASEH2AO75792 299 aaKnown RBP15.26■□□□□ 0.03
ITSN1-210ENST00000399353 CSH1P0DML2 217 aa15.26■□□□□ 0.03
ITSN1-210ENST00000399353 CSH2P0DML3 217 aa15.26■□□□□ 0.03
ITSN1-210ENST00000399353 KRT3P12035 628 aa15.26■□□□□ 0.03
ITSN1-210ENST00000399353 TAS2R42Q7RTR8 314 aa15.26■□□□□ 0.03
ITSN1-210ENST00000399353 KBTBD6Q86V97 674 aa15.26■□□□□ 0.03
ITSN1-210ENST00000399353 FRMD8Q9BZ67 464 aaPredicted RBP15.26■□□□□ 0.03
ITSN1-210ENST00000399353 NAA50Q9GZZ1 169 aaKnown RBP15.26■□□□□ 0.03
ITSN1-210ENST00000399353 EPB41L1Q9H4G0 881 aa15.26■□□□□ 0.03
ITSN1-210ENST00000399353 CNGB3Q9NQW8 809 aa15.26■□□□□ 0.03
ITSN1-210ENST00000399353 PNPLA3Q9NST1 481 aa15.26■□□□□ 0.03
ITSN1-210ENST00000399353 GTSE1Q9NYZ3 720 aa15.26■□□□□ 0.03
ITSN1-210ENST00000399353 DUOX1Q9NRD9 1551 aa15.26■□□□□ 0.03
ITSN1-210ENST00000399353 KPNA4O00629 521 aaPredicted RBP15.25■□□□□ 0.03
ITSN1-210ENST00000399353 CLOCKO15516 846 aa15.25■□□□□ 0.03
ITSN1-210ENST00000399353 DENRO43583 198 aaKnown RBP15.25■□□□□ 0.03
ITSN1-210ENST00000399353 MFN2O95140 757 aa15.25■□□□□ 0.03
ITSN1-210ENST00000399353 SERPINE1P05121 402 aa15.25■□□□□ 0.03
ITSN1-210ENST00000399353 MS4A2Q01362 244 aa15.25■□□□□ 0.03
ITSN1-210ENST00000399353 PITRM1Q5JRX3 1037 aa15.25■□□□□ 0.03
ITSN1-210ENST00000399353 TMEM179Q6ZVK1 233 aa15.25■□□□□ 0.03
ITSN1-210ENST00000399353 NETO2Q8NC67 525 aa15.25■□□□□ 0.03
ITSN1-210ENST00000399353 DCAF4Q8WV16 495 aa15.25■□□□□ 0.03
ITSN1-210ENST00000399353 HTRA1Q92743 480 aa15.25■□□□□ 0.03
ITSN1-210ENST00000399353 NSMCE3Q96MG7 304 aa15.25■□□□□ 0.03
ITSN1-210ENST00000399353 SSU72Q9NP77 194 aaKnown RBP15.25■□□□□ 0.03
ITSN1-210ENST00000399353 STK39Q9UEW8 545 aa15.25■□□□□ 0.03
ITSN1-210ENST00000399353 C5P01031 1676 aa15.25■□□□□ 0.03
ITSN1-210ENST00000399353 ATE1O95260 518 aa15.25■□□□□ 0.03
ITSN1-210ENST00000399353 PIK3R1P27986 724 aa15.25■□□□□ 0.03
ITSN1-210ENST00000399353 ZNF829Q3KNS6 432 aaPredicted RBP15.25■□□□□ 0.03
ITSN1-210ENST00000399353 SLC9B1Q4ZJI4 515 aa15.25■□□□□ 0.03
ITSN1-210ENST00000399353 AARS2Q5JTZ9 985 aaKnown RBP15.25■□□□□ 0.03
ITSN1-210ENST00000399353 ZNF362Q5T0B9 420 aaPredicted RBP15.25■□□□□ 0.03
ITSN1-210ENST00000399353 CMC1Q7Z7K0 106 aa15.25■□□□□ 0.03
ITSN1-210ENST00000399353 TDRD5Q8NAT2 981 aaKnown RBP15.25■□□□□ 0.03
ITSN1-210ENST00000399353 OR52B2Q96RD2 323 aa15.25■□□□□ 0.03
ITSN1-210ENST00000399353 CENPOQ9BU64 300 aa15.25■□□□□ 0.03
ITSN1-210ENST00000399353 EFCAB1Q9HAE3 211 aa15.25■□□□□ 0.03
ITSN1-210ENST00000399353 ZFYVE28Q9HCC9 887 aa15.25■□□□□ 0.03
ITSN1-210ENST00000399353 POLE4Q9NR33 117 aa15.25■□□□□ 0.03
ITSN1-210ENST00000399353 CROTQ9UKG9 612 aa15.25■□□□□ 0.03
ITSN1-210ENST00000399353 PRR12Q9ULL5 1215 aa15.25■□□□□ 0.03
ITSN1-210ENST00000399353 FAM32AQ9Y421 112 aaKnown RBP15.25■□□□□ 0.03
ITSN1-210ENST00000399353 ROBO3Q96MS0 1386 aa15.25■□□□□ 0.03
ITSN1-210ENST00000399353 TAF4O00268 1085 aa15.25■□□□□ 0.03
ITSN1-210ENST00000399353 TPP1O14773 563 aa15.25■□□□□ 0.03
ITSN1-210ENST00000399353 DDHD2O94830 711 aa15.25■□□□□ 0.03
ITSN1-210ENST00000399353 CPA3P15088 417 aa15.25■□□□□ 0.03
ITSN1-210ENST00000399353 OTOP1Q7RTM1 612 aa15.25■□□□□ 0.03
ITSN1-210ENST00000399353 SLC4A11Q8NBS3 891 aa15.25■□□□□ 0.03
ITSN1-210ENST00000399353 CEP41Q9BYV8 373 aa15.25■□□□□ 0.03
ITSN1-210ENST00000399353 SIAEQ9HAT2 523 aa15.25■□□□□ 0.03
ITSN1-210ENST00000399353 FBXO28Q9NVF7 368 aa15.25■□□□□ 0.03
ITSN1-210ENST00000399353 DMAC2Q9NW81 257 aa15.25■□□□□ 0.03
ITSN1-210ENST00000399353 COL1A1P02452 1464 aaPredicted RBP15.25■□□□□ 0.03
ITSN1-210ENST00000399353 SLIT3O75094 1523 aa15.25■□□□□ 0.03
ITSN1-210ENST00000399353 MT-ND1P03886 318 aa15.24■□□□□ 0.03
ITSN1-210ENST00000399353 ZNF12P17014 697 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms