RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 NPNTQ6UXI9 565 aa11.33□□□□□ -0.6
HPS4-202ENST00000398145 DHRSXQ8N5I4 330 aa11.33□□□□□ -0.6
HPS4-202ENST00000398145 RNF157Q96PX1 679 aa11.33□□□□□ -0.6
HPS4-202ENST00000398145 COG4Q9H9E3 785 aa11.33□□□□□ -0.6
HPS4-202ENST00000398145 CYLDQ9NQC7 956 aa11.33□□□□□ -0.6
HPS4-202ENST00000398145 CD274Q9NZQ7 290 aa11.33□□□□□ -0.6
HPS4-202ENST00000398145 SYNPO2Q9UMS6 1093 aa11.33□□□□□ -0.6
HPS4-202ENST00000398145 SCAF8Q9UPN6 1271 aaKnown RBP11.33□□□□□ -0.6
HPS4-202ENST00000398145 EFR3BQ9Y2G0 817 aa11.33□□□□□ -0.6
HPS4-202ENST00000398145 PEAK1Q9H792 1746 aa11.32□□□□□ -0.6
HPS4-202ENST00000398145 C15orf38-AP3S2A0A0A6YYH1 394 aa11.32□□□□□ -0.6
HPS4-202ENST00000398145 M0R2N6 131 aa11.32□□□□□ -0.6
HPS4-202ENST00000398145 F9P00740 461 aa11.32□□□□□ -0.6
HPS4-202ENST00000398145 BPGMP07738 259 aa11.32□□□□□ -0.6
HPS4-202ENST00000398145 PNPLA4P41247 253 aa11.32□□□□□ -0.6
HPS4-202ENST00000398145 ANGEL2Q5VTE6 544 aaKnown RBP11.32□□□□□ -0.6
HPS4-202ENST00000398145 IL31Q6EBC2 164 aa11.32□□□□□ -0.6
HPS4-202ENST00000398145 ARPINQ7Z6K5 226 aa11.32□□□□□ -0.6
HPS4-202ENST00000398145 CLPTM1LQ96KA5 538 aa11.32□□□□□ -0.6
HPS4-202ENST00000398145 GALNT8Q9NY28 637 aa11.32□□□□□ -0.6
HPS4-202ENST00000398145 PIM2Q9P1W9 311 aa11.32□□□□□ -0.6
HPS4-202ENST00000398145 RABGEF1Q9UJ41 708 aa11.32□□□□□ -0.6
HPS4-202ENST00000398145 PLLPQ9Y342 182 aa11.32□□□□□ -0.6
HPS4-202ENST00000398145 HDAC3O15379 428 aa11.32□□□□□ -0.6
HPS4-202ENST00000398145 CLASP2O75122 1294 aaKnown RBP11.32□□□□□ -0.6
HPS4-202ENST00000398145 VCLP18206 1134 aa11.32□□□□□ -0.6
HPS4-202ENST00000398145 TAF6P49848 677 aa11.32□□□□□ -0.6
HPS4-202ENST00000398145 OTUD3Q5T2D3 398 aaPredicted RBP11.32□□□□□ -0.6
HPS4-202ENST00000398145 LPCAT4Q643R3 524 aa11.32□□□□□ -0.6
HPS4-202ENST00000398145 CAMK1DQ8IU85 385 aa11.32□□□□□ -0.6
HPS4-202ENST00000398145 SCUBE3Q8IX30 993 aa11.32□□□□□ -0.6
HPS4-202ENST00000398145 PCDH20Q8N6Y1 951 aaKnown RBP11.32□□□□□ -0.6
HPS4-202ENST00000398145 EFCAB3Q8N7B9 438 aa11.32□□□□□ -0.6
HPS4-202ENST00000398145 BDH2Q9BUT1 245 aa11.32□□□□□ -0.6
HPS4-202ENST00000398145 C9orf16Q9BUW7 83 aa11.32□□□□□ -0.6
HPS4-202ENST00000398145 C12orf65Q9H3J6 166 aaKnown RBP11.32□□□□□ -0.6
HPS4-202ENST00000398145 RNPEPQ9H4A4 650 aa11.32□□□□□ -0.6
HPS4-202ENST00000398145 CASS4Q9NQ75 786 aa11.32□□□□□ -0.6
HPS4-202ENST00000398145 ZC4H2Q9NQZ6 224 aa11.32□□□□□ -0.6
HPS4-202ENST00000398145 MAN1C1Q9NR34 630 aa11.32□□□□□ -0.6
HPS4-202ENST00000398145 GPRC5DQ9NZD1 345 aa11.32□□□□□ -0.6
HPS4-202ENST00000398145 UBP1Q9NZI7 540 aa11.32□□□□□ -0.6
HPS4-202ENST00000398145 PRPF19Q9UMS4 504 aaKnown RBP11.32□□□□□ -0.6
HPS4-202ENST00000398145 UBQLN1Q9UMX0 589 aaKnown RBP11.32□□□□□ -0.6
HPS4-202ENST00000398145 PCDHGB4Q9UN71 923 aa11.32□□□□□ -0.6
HPS4-202ENST00000398145 POLIQ9UNA4 740 aa11.32□□□□□ -0.6
HPS4-202ENST00000398145 TMEM247A6NEH6 219 aa11.32□□□□□ -0.6
HPS4-202ENST00000398145 C2orf71A6NGG8 1288 aa11.32□□□□□ -0.6
HPS4-202ENST00000398145 E5RJQ4 531 aa11.32□□□□□ -0.6
HPS4-202ENST00000398145 BNIP3LO60238 219 aa11.32□□□□□ -0.6
HPS4-202ENST00000398145 PEX11AO75192 247 aa11.32□□□□□ -0.6
HPS4-202ENST00000398145 CSDE1O75534 798 aaKnown RBP11.32□□□□□ -0.6
HPS4-202ENST00000398145 LDLRP01130 860 aa11.32□□□□□ -0.6
HPS4-202ENST00000398145 ERVK-10P10266 1014 aa11.32□□□□□ -0.6
HPS4-202ENST00000398145 ITGB5P18084 799 aa11.32□□□□□ -0.6
HPS4-202ENST00000398145 CACNB2Q08289 660 aaPredicted RBP11.32□□□□□ -0.6
HPS4-202ENST00000398145 LAMTOR4Q0VGL1 99 aa11.32□□□□□ -0.6
HPS4-202ENST00000398145 CDH17Q12864 832 aa11.32□□□□□ -0.6
HPS4-202ENST00000398145 VPS72Q15906 364 aa11.32□□□□□ -0.6
HPS4-202ENST00000398145 ACSBG2Q5FVE4 666 aa11.32□□□□□ -0.6
HPS4-202ENST00000398145 MRNIPQ6NTE8 343 aa11.32□□□□□ -0.6
HPS4-202ENST00000398145 ANKS1BQ7Z6G8 1248 aa11.32□□□□□ -0.6
HPS4-202ENST00000398145 SLC22A9Q8IVM8 553 aa11.32□□□□□ -0.6
HPS4-202ENST00000398145 HELQQ8TDG4 1101 aa11.32□□□□□ -0.6
HPS4-202ENST00000398145 AFG1LQ8WV93 481 aa11.32□□□□□ -0.6
HPS4-202ENST00000398145 MFSD14AQ96MC6 490 aa11.32□□□□□ -0.6
HPS4-202ENST00000398145 C7orf26Q96N11 449 aa11.32□□□□□ -0.6
HPS4-202ENST00000398145 MBOAT7Q96N66 472 aa11.32□□□□□ -0.6
HPS4-202ENST00000398145 BRD8Q9H0E9 1235 aa11.32□□□□□ -0.6
HPS4-202ENST00000398145 ZCWPW1Q9H0M4 648 aa11.32□□□□□ -0.6
HPS4-202ENST00000398145 HACD1B0YJ81 288 aa11.31□□□□□ -0.6
HPS4-202ENST00000398145 KPNA4O00629 521 aaPredicted RBP11.31□□□□□ -0.6
HPS4-202ENST00000398145 CCDC159P0C7I6 412 aa11.31□□□□□ -0.6
HPS4-202ENST00000398145 PCSK1P29120 753 aa11.31□□□□□ -0.6
HPS4-202ENST00000398145 GABRB2P47870 512 aa11.31□□□□□ -0.6
HPS4-202ENST00000398145 CD151P48509 253 aa11.31□□□□□ -0.6
HPS4-202ENST00000398145 ZNF143P52747 638 aaPredicted RBP11.31□□□□□ -0.6
HPS4-202ENST00000398145 POU4F1Q01851 419 aa11.31□□□□□ -0.6
HPS4-202ENST00000398145 TRIM60Q495X7 471 aa11.31□□□□□ -0.6
HPS4-202ENST00000398145 DPY19L2Q6NUT2 758 aa11.31□□□□□ -0.6
HPS4-202ENST00000398145 ZCCHC7Q8N3Z6 543 aaKnown RBP11.31□□□□□ -0.6
HPS4-202ENST00000398145 PHF21BQ96EK2 531 aa11.31□□□□□ -0.6
HPS4-202ENST00000398145 OTUD5Q96G74 571 aa11.31□□□□□ -0.6
HPS4-202ENST00000398145 MAGED4Q96JG8 741 aa11.31□□□□□ -0.6
HPS4-202ENST00000398145 OLA1Q9NTK5 396 aaKnown RBP11.31□□□□□ -0.6
HPS4-202ENST00000398145 PSMD13Q9UNM6 376 aa11.31□□□□□ -0.6
HPS4-202ENST00000398145 EME2A4GXA9 379 aaPredicted RBP11.31□□□□□ -0.6
HPS4-202ENST00000398145 AVILO75366 819 aa11.31□□□□□ -0.6
HPS4-202ENST00000398145 MYO1DO94832 1006 aa11.31□□□□□ -0.6
HPS4-202ENST00000398145 RHOBTB1O94844 696 aa11.31□□□□□ -0.6
HPS4-202ENST00000398145 RAD23AP54725 363 aa11.31□□□□□ -0.6
HPS4-202ENST00000398145 RUNX1T1Q06455 604 aa11.31□□□□□ -0.6
HPS4-202ENST00000398145 C15orf59Q2T9L4 293 aaPredicted RBP11.31□□□□□ -0.6
HPS4-202ENST00000398145 DCAF12L1Q5VU92 463 aa11.31□□□□□ -0.6
HPS4-202ENST00000398145 PRMT9Q6P2P2 845 aa11.31□□□□□ -0.6
HPS4-202ENST00000398145 ZDHHC17Q8IUH5 632 aa11.31□□□□□ -0.6
HPS4-202ENST00000398145 CCDC103Q8IW40 242 aa11.31□□□□□ -0.6
HPS4-202ENST00000398145 OSCP1Q8WVF1 389 aa11.31□□□□□ -0.6
HPS4-202ENST00000398145 GLMNQ92990 594 aa11.31□□□□□ -0.6
HPS4-202ENST00000398145 UNKQ9C0B0 810 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms