RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 CFAP99D6REC4 459 aa8.52□□□□□ -1.05
PTPRD-204ENST00000397606 PTPN2P17706 415 aa8.52□□□□□ -1.05
PTPRD-204ENST00000397606 SCNN1AP37088 669 aa8.52□□□□□ -1.05
PTPRD-204ENST00000397606 SERPINB9P50453 376 aa8.52□□□□□ -1.05
PTPRD-204ENST00000397606 RPS6KA2Q15349 733 aa8.52□□□□□ -1.05
PTPRD-204ENST00000397606 C3orf62Q6ZUJ4 267 aa8.52□□□□□ -1.05
PTPRD-204ENST00000397606 RFX8Q6ZV50 586 aa8.52□□□□□ -1.05
PTPRD-204ENST00000397606 BBS12Q6ZW61 710 aa8.52□□□□□ -1.05
PTPRD-204ENST00000397606 SRRM1Q8IYB3 904 aaKnown RBP8.52□□□□□ -1.05
PTPRD-204ENST00000397606 PPP1R10Q96QC0 940 aaKnown RBP8.52□□□□□ -1.05
PTPRD-204ENST00000397606 KCNK16Q96T55 309 aa8.52□□□□□ -1.05
PTPRD-204ENST00000397606 WBP1LQ9NX94 342 aa8.52□□□□□ -1.05
PTPRD-204ENST00000397606 RCOR3Q9P2K3 495 aaPredicted RBP8.52□□□□□ -1.05
PTPRD-204ENST00000397606 UBA2Q9UBT2 640 aaPredicted RBP8.52□□□□□ -1.05
PTPRD-204ENST00000397606 HMGXB4Q9UGU5 601 aa8.52□□□□□ -1.05
PTPRD-204ENST00000397606 SEPT3Q9UH03 358 aa8.52□□□□□ -1.05
PTPRD-204ENST00000397606 PTPRJQ12913 1337 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 SDR42E2A6NKP2 422 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 ZNF263O14978 683 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 SYNCRIPO60506 623 aaKnown RBP8.51□□□□□ -1.05
PTPRD-204ENST00000397606 NDUFS3O75489 264 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 SOD2P04179 222 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 FECHP22830 423 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 SCNN1BP51168 640 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 GPR17Q13304 367 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 GPR158Q5T848 1215 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 TPGS1Q6ZTW0 290 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 VSIG1Q86XK7 387 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 CREG2Q8IUH2 290 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 DQX1Q8TE96 717 aaKnown RBP8.51□□□□□ -1.05
PTPRD-204ENST00000397606 IGSF21Q96ID5 467 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 FCRL2Q96LA5 508 aaPredicted RBP8.51□□□□□ -1.05
PTPRD-204ENST00000397606 SAMD11Q96NU1 681 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 LRRC40Q9H9A6 602 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 CALCOCO1Q9P1Z2 691 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 QSER1Q2KHR3 1735 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 PAPSS1O43252 624 aaPredicted RBP8.51□□□□□ -1.05
PTPRD-204ENST00000397606 TBC1D4O60343 1298 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 RALBP11234 206 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 CLEC20AQ6ZU45 233 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 FRA10AC1Q70Z53 315 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 ZNF280BQ86YH2 543 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 MAB21L3Q8N8X9 362 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 ZNF669Q96BR6 464 aaPredicted RBP8.51□□□□□ -1.05
PTPRD-204ENST00000397606 HDAC11Q96DB2 347 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 TWNKQ96RR1 684 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 DDX23Q9BUQ8 820 aaKnown RBP8.51□□□□□ -1.05
PTPRD-204ENST00000397606 XYLT2Q9H1B5 865 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 C20orf96Q9NUD7 363 aaPredicted RBP8.51□□□□□ -1.05
PTPRD-204ENST00000397606 TBC1D14Q9P2M4 693 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 AJAP1Q9UKB5 411 aaPredicted RBP8.51□□□□□ -1.05
PTPRD-204ENST00000397606 SHOC2Q9UQ13 582 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 VPS9D1Q9Y2B5 631 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 FER1L6Q2WGJ9 1857 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 SLC38A8A6NNN8 435 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 CCL16O15467 120 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 CTIFO43310 598 aaKnown RBP8.51□□□□□ -1.05
PTPRD-204ENST00000397606 FGF18O76093 207 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 HTR7P34969 479 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 GJA8P48165 433 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 GTF2H3Q13889 308 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 STARD3Q14849 445 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 ATP13A4Q4VNC1 1196 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 GKAP1Q5VSY0 366 aaPredicted RBP8.51□□□□□ -1.05
PTPRD-204ENST00000397606 TSSK1BQ9BXA7 367 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 SARS2Q9NP81 518 aaKnown RBP8.51□□□□□ -1.05
PTPRD-204ENST00000397606 COMMD8Q9NX08 183 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 ZMYM5Q9UJ78 669 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 EFR3BQ9Y2G0 817 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 ZSCAN5CA6NGD5 496 aaPredicted RBP8.51□□□□□ -1.05
PTPRD-204ENST00000397606 KCNK1O00180 336 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 RNF103O00237 685 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 ENDOD1O94919 500 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 ERCC2P18074 760 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 PTK6Q13882 451 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 SPARCL1Q14515 664 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 KYNUQ16719 465 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 SLC45A4Q5BKX6 768 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 ATG16L1Q676U5 607 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 WDR93Q6P2C0 686 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 MYLK4Q86YV6 388 aaPredicted RBP8.51□□□□□ -1.05
PTPRD-204ENST00000397606 FAM126BQ8IXS8 530 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 GPATCH11Q8N954 259 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 BLOC1S5Q8TDH9 187 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 ARHGEF2Q92974 986 aaKnown RBP8.51□□□□□ -1.05
PTPRD-204ENST00000397606 TSPAN17Q96FV3 270 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 ARHGEF38Q9NXL2 777 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 DNPEPQ9ULA0 475 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 HBS1LQ9Y450 684 aaKnown RBP8.51□□□□□ -1.05
PTPRD-204ENST00000397606 RAD54BQ9Y620 910 aa8.51□□□□□ -1.05
PTPRD-204ENST00000397606 MTA2O94776 668 aa8.5□□□□□ -1.05
PTPRD-204ENST00000397606 IGSF6O95976 241 aa8.5□□□□□ -1.05
PTPRD-204ENST00000397606 POLR2EP19388 210 aaKnown RBP8.5□□□□□ -1.05
PTPRD-204ENST00000397606 SPRP35270 261 aaPredicted RBP8.5□□□□□ -1.05
PTPRD-204ENST00000397606 HADHBP55084 474 aaKnown RBP8.5□□□□□ -1.05
PTPRD-204ENST00000397606 TAS2R40P59535 323 aa8.5□□□□□ -1.05
PTPRD-204ENST00000397606 C15orf39Q6ZRI6 1047 aa8.5□□□□□ -1.05
PTPRD-204ENST00000397606 TBC1D1Q86TI0 1168 aaPredicted RBP8.5□□□□□ -1.05
PTPRD-204ENST00000397606 TMEM110Q86TL2 294 aa8.5□□□□□ -1.05
PTPRD-204ENST00000397606 METTL3Q86U44 580 aaKnown RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms